CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g10637
(
Steinernema carpocapsae
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
L596_g10637
T029396_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g10637.t1
BED ZF
165
204
NPVWPYFTVENGSAYCRQCTYSTRSVFSTNLKVHLRSHHR
L596_g10637.t1
BED ZF
359
399
HPVWQYFTDLEDKYVGCTMCPFRTASAFSTNMKMHLKAHHK
Links
Other
BED ZF
family TFs
Other
Steinernema carpocapsae
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g22347
Steinernema feltiae
L889_g22347
N
0.975
L892_g20284
Steinernema scapterisci
L892_g20284
N
0.975
L893_g18581
Steinernema glaseri
L893_g18581
N
0.975
L898_g16670
Steinernema monticolum
L898_g16670
N
0.951
CBG10038
Caenorhabditis briggsae
CBG10038
N
0.802
CBN24253
Caenorhabditis brenneri
CBN24253
N
0.802
CJA06713
Caenorhabditis japonica
CJA06713
N
0.802
CRE25566
Caenorhabditis remanei
CRE25566
N
0.802
gei-13
Caenorhabditis elegans
WBGene00001570
N
0.802
Ppa-gei-13
Pristionchus pacificus
PPA19882
N
0.790
Hba_11216
Heterorhabditis bacteriophora
Hba_11216
N
0.778
HCOI00039700
Haemonchus contortus
HCOI00039700
N
0.778
SMUV_0000711101
Syphacia muris
SMUV_0000711101
N
0.707
ASIM_0001676401
Anisakis simplex
ASIM_0001676401
N
0.704