CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold547-EXSNAP2012.7
(
Pristionchus exspectatus
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
scaffold547-EXSNAP2012.7
T029674_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold547-EXSNAP2012.7
BED ZF
114
158
HPVWEFFRDLKLENGSSSVLCLHCGWTGEDRSPNNLRTHLKKSHS
Links
Other
BED ZF
family TFs
Other
Pristionchus exspectatus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ppa-bed-2
Pristionchus pacificus
PPA00848
N
1.000
HCOI01730700
Haemonchus contortus
HCOI01730700
N
0.791
CJA37634
Caenorhabditis japonica
CJA37634
N
0.744
Hba_20498
Heterorhabditis bacteriophora
Hba_20498
N
0.744
CRE01079
Caenorhabditis remanei
CRE01079
N
0.721