AMTR_s00064p00208400 (Amborella trichopoda)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AMTR_s00064p00208400 T030511_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15505.1
M01125_2.00 		Cannabis sativa
NRCACGTGYN
NRCACGTGYN		 PBM
Lambert et al.(2019)
pTH10268 		0.848 0.673
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN19848 bHLH 313 361

Links

Other bHLH family TFs
Other Amborella trichopoda TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0108s0270 Salix purpurea SapurV1A.0108s0270 I 0.910
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I 0.880
29912.m005337 Ricinus communis 29912.m005337 I 0.880
cassava46879.m1 Manihot esculenta cassava46879.m1 I 0.880
OPUNC05G05910 Oryza punctata OPUNC05G05910 I 0.870
Si024546m.g Setaria italica Si024546m.g I 0.861
Pavir.Ca00825 Panicum virgatum Pavir.Ca00825 I 0.861
Pavir.J01638 Panicum virgatum Pavir.J01638 I 0.861
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I 0.860
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I 0.860
Cla017100 Citrullus lanatus Cla017100 I 0.860
Cucsa.117060 Cucumis sativus Cucsa.117060 I 0.860
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I 0.860
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I 0.860
MDP0000782908 Malus domestica MDP0000782908 I 0.860
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I 0.860
MDP0000119495 Malus domestica MDP0000119495 I 0.859
MDP0000252899 Malus domestica MDP0000252899 I 0.859
cassava25701.m1 Manihot esculenta cassava25701.m1 I 0.856
BGIOSGA033976 Oryza indica BGIOSGA033976 I 0.849
LPERR05G05410 Leersia perrieri LPERR05G05410 I 0.849
OB05G15870 Oryza brachyantha OB05G15870 I 0.849
OBART05G06380 Oryza barthii OBART05G06380 I 0.849
OGLUM05G06690 Oryza glumaepatula OGLUM05G06690 I 0.849
ONIVA05G07120 Oryza nivara ONIVA05G07120 I 0.849
ORGLA05G0058200 Oryza glaberrima ORGLA05G0058200 I 0.849
ORUFI05G06870 Oryza rufipogon ORUFI05G06870 I 0.849
OS05G0199800 Oryza sativa OS05G0199800 I 0.849
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I 0.848
PK15505.1 Cannabis sativa PK15505.1 D 0.848
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I 0.847