CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00102p00056000
(
Amborella trichopoda
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
AMTR_s00102p00056000
T030529_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN00522
bHLH
81
127
KTLSSERRRRGKLNERLYALRTLVPNITKMDKASIVGDAVVYVQKLQ
Links
Other
bHLH
family TFs
Other
Amborella trichopoda
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10029810m.g
Citrus clementina
Ciclev10029810m.g
N
0.910
Ciclev10030052m.g
Citrus clementina
Ciclev10030052m.g
N
0.910
orange1.1g021355m.g
Citrus sinensis
orange1.1g021355m.g
N
0.910
orange1.1g042465m.g
Citrus sinensis
orange1.1g042465m.g
N
0.910
AMTR_s00102p00046460
Amborella trichopoda
AMTR_s00102p00046460
N
0.879
PRUPE_ppa018718mg
Prunus persica
PRUPE_ppa018718mg
N
0.878
Pm001154
Prunus mume
Pm001154
N
0.878
GLYMA13G39650
Glycine max
GLYMA13G39650
N
0.875
FIT1
Populus trichocarpa
POPTR_0009s01100
N
0.875
TCM_041590
Theobroma cacao
TCM_041590
N
0.875
Cla008847
Citrullus lanatus
Cla008847
N
0.875
cassava28523.m1
Manihot esculenta
cassava28523.m1
N
0.875
Cucsa.385700
Cucumis sativus
Cucsa.385700
N
0.875
Eucgr.B03931
Eucalyptus grandis
Eucgr.B03931
N
0.875
evm.TU.contig_28125.2
Carica papaya
evm.TU.contig_28125.2
N
0.875
gene24608-v1.0-hybrid
Fragaria vesca
gene24608-v1.0-hybrid
N
0.875
Gorai.009G090400
Gossypium raimondii
Gorai.009G090400
N
0.875
Lus10016151.g
Linum usitatissimum
Lus10016151.g
N
0.875
SapurV1A.1382s0060
Salix purpurea
SapurV1A.1382s0060
N
0.875
PK26582.1
Cannabis sativa
PK26582.1
N
0.875
chr3.CM0070.320.nc
Lotus japonicus
chr3.CM0070.320.nc
N
0.875
chr3.CM0396.580.nc
Lotus japonicus
chr3.CM0396.580.nc
N
0.875
PDK_20s1479721g001
Phoenix dactylifera
PDK_20s1479721g001
N
0.875
GLYMA12G30240
Glycine max
GLYMA12G30240
N
0.864
PGSC0003DMG400019017
Solanum tuberosum
PGSC0003DMG400019017
N
0.864
Solyc06g051550.2
Solanum lycopersicum
Solyc06g051550.2
N
0.864
FIT
Arabidopsis thaliana
AT2G28160
N
0.855
Bo3g040310
Brassica oleracea
Bo3g040310
N
0.855
Bo4g071850
Brassica oleracea
Bo4g071850
N
0.855
Bra000495
Brassica rapa
Bra000495
N
0.855
Bra011972
Brassica rapa
Bra011972
N
0.855
FIT1
Arabidopsis lyrata
fgenesh2_kg.4__753__AT2G28160.1
N
0.855
MTR_2g084280
Medicago truncatula
MTR_2g084280
N
0.855
Bostr.27991s0112
Boechera stricta
Bostr.27991s0112
N
0.855
Cagra.12562s0002
Capsella grandiflora
Cagra.12562s0002
N
0.855
Carubv10023654m.g
Capsella rubella
Carubv10023654m.g
N
0.855
gene24607-v1.0-hybrid
Fragaria vesca
gene24607-v1.0-hybrid
N
0.855
Thhalv10016957m.g
Eutrema salsugineum
Thhalv10016957m.g
N
0.855
Pavir.Ga01979
Panicum virgatum
Pavir.Ga01979
N
0.854
BRADI5G07720
Brachypodium distachyon
BRADI5G07720
N
0.851
GLYMA11G19850
Glycine max
GLYMA11G19850
N
0.851
GRMZM2G107672
Zea mays
GRMZM2G107672
N
0.851
GRMZM2G173521
Zea mays
GRMZM2G173521
N
0.851
GSMUA_Achr6G27600_001
Musa acuminata
GSMUA_Achr6G27600_001
N
0.851
LPERR04G07210
Leersia perrieri
LPERR04G07210
N
0.851
MLOC_6707
Hordeum vulgare
MLOC_6707
N
0.851
OB04G17410
Oryza brachyantha
OB04G17410
N
0.851
OBART04G10120
Oryza barthii
OBART04G10120
N
0.851
OGLUM04G09730
Oryza glumaepatula
OGLUM04G09730
N
0.851
OLONG_016577
Oryza longistaminata
OLONG_016577
N
0.851
ONIVA04G07960
Oryza nivara
ONIVA04G07960
N
0.851
OPUNC04G08160
Oryza punctata
OPUNC04G08160
N
0.851
ORGLA02G0343900
Oryza glaberrima
ORGLA02G0343900
N
0.851
ORGLA04G0072000
Oryza glaberrima
ORGLA04G0072000
N
0.851
ORUFI04G11150
Oryza rufipogon
ORUFI04G11150
N
0.851
OS04G0381700
Oryza sativa
OS04G0381700
N
0.851
Sb06g012030
Sorghum bicolor
Sb06g012030
N
0.851
Si010468m.g
Setaria italica
Si010468m.g
N
0.851
Si010533m.g
Setaria italica
Si010533m.g
N
0.851
Traes_2AL_088338613
Triticum aestivum
Traes_2AL_088338613
N
0.851
Traes_2BL_F442E87DD
Triticum aestivum
Traes_2BL_F442E87DD
N
0.851
Traes_2DL_47E8C44C6
Triticum aestivum
Traes_2DL_47E8C44C6
N
0.851
FIT1
Vitis vinifera
VIT_06s0061g00720
N
0.851
Aquca_019_00196
Aquilegia coerulea
Aquca_019_00196
N
0.851
Pavir.J28741
Panicum virgatum
Pavir.J28741
N
0.851