AT4G25400 (Arabidopsis thaliana)

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AT4G25400 T030676_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. NST1 promoter was detected in various tissues in which lignified secondary walls develop.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Arabidopsis thaliana Transfac license required
Transfac license required
Matys et al.(2006)
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G25400.1 bHLH 2 54
AT4G25400.2 bHLH 25 77


Other bHLH family TFs
Other Arabidopsis thaliana TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.914
Bo7g110280 Brassica oleracea Bo7g110280 I 0.893
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.893
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.893
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.893
Gorai.006G196500 Gossypium raimondii Gorai.006G196500 I 0.881
Bra019167 Brassica rapa Bra019167 I 0.880
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I 0.880
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.873
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.873
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.873
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.873
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.873
Bra022562 Brassica rapa Bra022562 I 0.869
Cagra.2248s0016 Capsella grandiflora Cagra.2248s0016 I 0.866
Carubv10006264m.g Capsella rubella Carubv10006264m.g I 0.866
MDP0000246258 Malus domestica MDP0000246258 I 0.861
Pm019419 Prunus mume Pm019419 I 0.861
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.861
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.861
cassava45968.m1 Manihot esculenta cassava45968.m1 I 0.860
Bo2g048240 Brassica oleracea Bo2g048240 I 0.858
fgenesh2_kg.7__1722__AT4G25400.1 Arabidopsis lyrata fgenesh2_kg.7__1722__AT4G25400.1 I 0.856
Gorai.008G282300 Gossypium raimondii Gorai.008G282300 I 0.854
BHLH125 Arabidopsis thaliana AT1G62975 I 0.850
Bostr.13671s0206 Boechera stricta Bostr.13671s0206 I 0.850
Carubv10020804m.g Capsella rubella Carubv10020804m.g I 0.850
fgenesh2_kg.2__186__AT1G62975.1 Arabidopsis lyrata fgenesh2_kg.2__186__AT1G62975.1 I 0.850
Cagra.1670s0006 Capsella grandiflora Cagra.1670s0006 I 0.850
Bostr.22157s0026 Boechera stricta Bostr.22157s0026 I 0.850
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I 0.849
Ca_22233 Cicer arietinum Ca_22233 I 0.849
PK11667.1 Cannabis sativa PK11667.1 I 0.849
PK15358.1 Cannabis sativa PK15358.1 I 0.849
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I 0.849
GLYMA09G27610 Glycine max GLYMA09G27610 I 0.849
GLYMA16G32610 Glycine max GLYMA16G32610 I 0.849
cassava21379.m1 Manihot esculenta cassava21379.m1 I 0.849
Eucgr.F04119 Eucalyptus grandis Eucgr.F04119 I 0.846
evm.TU.supercontig_4.181 Carica papaya evm.TU.supercontig_4.181 I 0.845
Thhalv10015297m.g Eutrema salsugineum Thhalv10015297m.g I 0.845
TCM_016134 Theobroma cacao TCM_016134 I 0.845
TCM_016133 Theobroma cacao TCM_016133 I 0.845
Gorai.011G226600 Gossypium raimondii Gorai.011G226600 I 0.840