CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA008112
(
Oryza indica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
BGIOSGA008112
T030876_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK18401.1
M01126_2.00
Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN
PBM
Lambert et al.(2019)
pTH11272
0.898
0.804
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA008112-PA
bHLH
40
90
CKVQKADREKMRRDRLNEQFQELGSTLDPDRPRNDKATILSDAIQMLKDLT
Links
Other
bHLH
family TFs
Other
Oryza indica
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00070p00188780
Amborella trichopoda
AMTR_s00070p00188780
I
0.890
AMTR_s00041p00193340
Amborella trichopoda
AMTR_s00041p00193340
I
0.902
BRADI3G11520
Brachypodium distachyon
BRADI3G11520
I
0.855
PK18401.1
Cannabis sativa
PK18401.1
D
0.898
evm.TU.supercontig_6.255
Carica papaya
evm.TU.supercontig_6.255
I
0.866
evm.TU.supercontig_17.155
Carica papaya
evm.TU.supercontig_17.155
I
0.838
Cla014511
Citrullus lanatus
Cla014511
I
0.898
Cla001685
Citrullus lanatus
Cla001685
I
0.851
Ciclev10028783m.g
Citrus clementina
Ciclev10028783m.g
I
0.887
orange1.1g022288m.g
Citrus sinensis
orange1.1g022288m.g
I
0.887
Cucsa.169240
Cucumis sativus
Cucsa.169240
I
0.877
Cucsa.043580
Cucumis sativus
Cucsa.043580
I
0.898
Eucgr.I02346
Eucalyptus grandis
Eucgr.I02346
I
0.898
Eucgr.G01757
Eucalyptus grandis
Eucgr.G01757
I
0.887
gene14608-v1.0-hybrid
Fragaria vesca
gene14608-v1.0-hybrid
I
0.863
gene07391-v1.0-hybrid
Fragaria vesca
gene07391-v1.0-hybrid
I
0.874
GLYMA12G02740
Glycine max
GLYMA12G02740
I
0.880
GLYMA07G26910
Glycine max
GLYMA07G26910
I
0.866
GLYMA08G15740
Glycine max
GLYMA08G15740
I
0.902
GLYMA15G29630
Glycine max
GLYMA15G29630
I
0.877
Gorai.005G252200
Gossypium raimondii
Gorai.005G252200
I
0.898
LPERR02G12290
Leersia perrieri
LPERR02G12290
I
0.879
Lus10041908.g
Linum usitatissimum
Lus10041908.g
I
0.902
Lus10028456.g
Linum usitatissimum
Lus10028456.g
I
0.902
MDP0000275844
Malus domestica
MDP0000275844
I
0.902
cassava24936.valid.m1
Manihot esculenta
cassava24936.valid.m1
I
0.898
cassava24935.valid.m1
Manihot esculenta
cassava24935.valid.m1
I
0.898
MTR_4g075480
Medicago truncatula
MTR_4g075480
I
0.866
mgf017107m
Mimulus guttatus
mgf017107m
I
0.875
GSMUA_Achr11G16630_001
Musa acuminata
GSMUA_Achr11G16630_001
I
0.902
OB0197G10010
Oryza brachyantha
OB0197G10010
I
0.879
OPUNC02G13570
Oryza punctata
OPUNC02G13570
I
0.914
OS02G0433600
Oryza sativa
OS02G0433600
I
0.914
Pavir.Aa02015
Panicum virgatum
Pavir.Aa02015
I
0.879
Pavir.Ab01730
Panicum virgatum
Pavir.Ab01730
I
0.855
estExt_fgenesh1_pg.C_1360017
Physcomitrella patens
estExt_fgenesh1_pg.C_1360017
I
0.866
fgenesh1_pg.scaffold_31000088
Physcomitrella patens
fgenesh1_pg.scaffold_31000088
I
0.866
POPTR_0004s17540
Populus trichocarpa
POPTR_0004s17540
I
0.898
POPTR_0005s11550
Populus trichocarpa
POPTR_0005s11550
I
0.866
POPTR_0009s13220
Populus trichocarpa
POPTR_0009s13220
I
0.863
Pm026758
Prunus mume
Pm026758
I
0.898
Pm021043
Prunus mume
Pm021043
I
0.902
PRUPE_ppa008347mg
Prunus persica
PRUPE_ppa008347mg
I
0.902
PRUPE_ppa008596mg
Prunus persica
PRUPE_ppa008596mg
I
0.898
29830.m001386
Ricinus communis
29830.m001386
I
0.902
29711.m000322
Ricinus communis
29711.m000322
I
0.898
SapurV1A.1150s0140
Salix purpurea
SapurV1A.1150s0140
I
0.900
SapurV1A.0117s0370
Salix purpurea
SapurV1A.0117s0370
I
0.911
Si017804m.g
Setaria italica
Si017804m.g
I
0.879
Solyc01g111130.2
Solanum lycopersicum
Solyc01g111130.2
I
0.864
PGSC0003DMG400001594
Solanum tuberosum
PGSC0003DMG400001594
I
0.864
Sb03g028030
Sorghum bicolor
Sb03g028030
I
0.879
TCM_000204
Theobroma cacao
TCM_000204
I
0.902
TCM_006692
Theobroma cacao
TCM_006692
I
0.887
bHLH121
Vitis vinifera
VIT_03s0038g01790
I
0.902
bHLH11
Vitis vinifera
VIT_04s0023g03430
I
0.898
GRMZM2G114444
Zea mays
GRMZM2G114444
I
0.879