Bo3g162600 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo3g162600 T031146_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DYT1
M02654_2.00 		Arabidopsis thaliana
TCACGTGWYTBRYK
MRYVARWCACGTGA		 SELEX
Mathelier et al.(2014)
MA0580.1 		0.894 0.939
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g162600.1 bHLH 33 81

Links

Other bHLH family TFs
Other Brassica oleracea TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra013519 Brassica rapa Bra013519 I 0.914
DYT1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001824 I 0.914
Bostr.10689s0082 Boechera stricta Bostr.10689s0082 I 0.914
DYT1 Arabidopsis thaliana AT4G21330 D 0.894
Thhalv10027186m.g Eutrema salsugineum Thhalv10027186m.g I 0.894
Bo1g024080 Brassica oleracea Bo1g024080 I 0.884
MTR_4g091910 Medicago truncatula MTR_4g091910 I 0.881
Cagra.1062s0003 Capsella grandiflora Cagra.1062s0003 I 0.870
Carubv10007380m.g Capsella rubella Carubv10007380m.g I 0.870
GLYMA13G32370 Glycine max GLYMA13G32370 I 0.855
GLYMA15G06950 Glycine max GLYMA15G06950 I 0.855
orange1.1g042649m.g Citrus sinensis orange1.1g042649m.g I 0.855
chr4.CM1616.440.nc Lotus japonicus chr4.CM1616.440.nc I 0.855
LjT46I09.60.nd Lotus japonicus LjT46I09.60.nd I 0.855
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I 0.845