CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g165090
(
Brassica oleracea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Bo4g165090
T031176_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g165090.1
bHLH
127
176
DRSRTLISERRRRSRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQ
Links
Other
bHLH
family TFs
Other
Brassica oleracea
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_019_00196
Aquilegia coerulea
Aquca_019_00196
N
0.894
FIT1
Arabidopsis lyrata
fgenesh2_kg.4__753__AT2G28160.1
N
0.890
FIT
Arabidopsis thaliana
AT2G28160
N
0.890
Bostr.27991s0112
Boechera stricta
Bostr.27991s0112
N
0.890
BRADI5G07720
Brachypodium distachyon
BRADI5G07720
N
0.870
Bo3g040310
Brassica oleracea
Bo3g040310
N
0.890
Bo4g071850
Brassica oleracea
Bo4g071850
N
0.890
Bra000495
Brassica rapa
Bra000495
N
0.890
Bra011972
Brassica rapa
Bra011972
N
0.890
Bra034392
Brassica rapa
Bra034392
N
0.914
PK26582.1
Cannabis sativa
PK26582.1
N
0.870
Cagra.12562s0002
Capsella grandiflora
Cagra.12562s0002
N
0.890
Carubv10023654m.g
Capsella rubella
Carubv10023654m.g
N
0.890
evm.TU.contig_28125.2
Carica papaya
evm.TU.contig_28125.2
N
0.870
Ca_17453
Cicer arietinum
Ca_17453
N
0.846
Cla008847
Citrullus lanatus
Cla008847
N
0.870
Ciclev10003738m.g
Citrus clementina
Ciclev10003738m.g
N
0.845
Cucsa.385700
Cucumis sativus
Cucsa.385700
N
0.870
Eucgr.B03931
Eucalyptus grandis
Eucgr.B03931
N
0.870
Thhalv10016957m.g
Eutrema salsugineum
Thhalv10016957m.g
N
0.890
gene24608-v1.0-hybrid
Fragaria vesca
gene24608-v1.0-hybrid
N
0.870
gene24607-v1.0-hybrid
Fragaria vesca
gene24607-v1.0-hybrid
N
0.890
GLYMA12G30240
Glycine max
GLYMA12G30240
N
0.858
GLYMA12G08640
Glycine max
GLYMA12G08640
N
0.870
GLYMA11G19850
Glycine max
GLYMA11G19850
N
0.870
GLYMA13G39650
Glycine max
GLYMA13G39650
N
0.870
Gorai.009G090400
Gossypium raimondii
Gorai.009G090400
N
0.870
MLOC_6707
Hordeum vulgare
MLOC_6707
N
0.870
LPERR04G07210
Leersia perrieri
LPERR04G07210
N
0.870
chr3.CM0396.580.nc
Lotus japonicus
chr3.CM0396.580.nc
N
0.870
chr3.CM0070.320.nc
Lotus japonicus
chr3.CM0070.320.nc
N
0.870
cassava28523.m1
Manihot esculenta
cassava28523.m1
N
0.870
MTR_4g057270
Medicago truncatula
MTR_4g057270
N
0.914
MTR_2g084280
Medicago truncatula
MTR_2g084280
N
0.890
mgf022253m
Mimulus guttatus
mgf022253m
N
0.876
mgf025442m
Mimulus guttatus
mgf025442m
N
0.900
GSMUA_Achr6G27600_001
Musa acuminata
GSMUA_Achr6G27600_001
N
0.870
OBART04G10120
Oryza barthii
OBART04G10120
N
0.870
OB04G17410
Oryza brachyantha
OB04G17410
N
0.870
ORGLA04G0072000
Oryza glaberrima
ORGLA04G0072000
N
0.870
ORGLA02G0343900
Oryza glaberrima
ORGLA02G0343900
N
0.870
OGLUM04G09730
Oryza glumaepatula
OGLUM04G09730
N
0.870
OLONG_016577
Oryza longistaminata
OLONG_016577
N
0.870
ONIVA04G07960
Oryza nivara
ONIVA04G07960
N
0.870
OPUNC04G08160
Oryza punctata
OPUNC04G08160
N
0.870
ORUFI04G11150
Oryza rufipogon
ORUFI04G11150
N
0.870
OS04G0381700
Oryza sativa
OS04G0381700
N
0.870
Pavir.Ga01979
Panicum virgatum
Pavir.Ga01979
N
0.867
Pavir.J28741
Panicum virgatum
Pavir.J28741
N
0.870
Pavir.J29678
Panicum virgatum
Pavir.J29678
N
0.846
PDK_20s1479721g001
Phoenix dactylifera
PDK_20s1479721g001
N
0.870
FIT1
Populus trichocarpa
POPTR_0009s01100
N
0.870
Pm001154
Prunus mume
Pm001154
N
0.867
PRUPE_ppa018718mg
Prunus persica
PRUPE_ppa018718mg
N
0.867
SapurV1A.1382s0060
Salix purpurea
SapurV1A.1382s0060
N
0.870
Si010533m.g
Setaria italica
Si010533m.g
N
0.870
Si010468m.g
Setaria italica
Si010468m.g
N
0.870
Solyc06g051550.2
Solanum lycopersicum
Solyc06g051550.2
N
0.858
PGSC0003DMG400019017
Solanum tuberosum
PGSC0003DMG400019017
N
0.858
Sb06g012030
Sorghum bicolor
Sb06g012030
N
0.870
TCM_041590
Theobroma cacao
TCM_041590
N
0.870
Traes_2DL_47E8C44C6
Triticum aestivum
Traes_2DL_47E8C44C6
N
0.870
Traes_2BL_F442E87DD
Triticum aestivum
Traes_2BL_F442E87DD
N
0.870
Traes_2AL_088338613
Triticum aestivum
Traes_2AL_088338613
N
0.870
FIT1
Vitis vinifera
VIT_06s0061g00720
N
0.870
GRMZM2G173521
Zea mays
GRMZM2G173521
N
0.870
GRMZM2G107672
Zea mays
GRMZM2G107672
N
0.870