Bra029562 (Brassica rapa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bra029562 T031517_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra029562.1-P bHLH 161 201

Links

Other bHLH family TFs
Other Brassica rapa TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30131.m007272 Ricinus communis 30131.m007272 I
AAEL002381 Aedes aegypti AAEL002381 N
AMAG_00757 Allomyces macrogynus AMAG_00757 N
AMAG_02260 Allomyces macrogynus AMAG_02260 N
AMTR_s00171p00070550 Amborella trichopoda AMTR_s00171p00070550 I
BGIOSGA016928 Oryza indica BGIOSGA016928 N
BGIOSGA023639 Oryza indica BGIOSGA023639 I
BGIOSGA027814 Oryza indica BGIOSGA027814 I
BGIOSGA027819 Oryza indica BGIOSGA027819 I
Bo2g160920 Brassica oleracea Bo2g160920 I
Bo9g014140 Brassica oleracea Bo9g014140 I
Bostr.10199s0131 Boechera stricta Bostr.10199s0131 N
Bra026498 Brassica rapa Bra026498 I
Bra029371 Brassica rapa Bra029371 I
BRADI3G12920 Brachypodium distachyon BRADI3G12920 I
Cagra.0086s0060 Capsella grandiflora Cagra.0086s0060 I
Carubv10001858m.g Capsella rubella Carubv10001858m.g I
Ca_05351 Cicer arietinum Ca_05351 I
cgd2_2120 Cryptosporidium parvum cgd2_2120 N
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I
Chro.20230 Cryptosporidium hominis Chro.20230 N
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N
Cla009222 Citrullus lanatus Cla009222 I
Cucsa.300030 Cucumis sativus Cucsa.300030 I
ENSMMUP00000037751 Macaca fascicularis ENSMMUP00000037751 N
Eucgr.J00336 Eucalyptus grandis Eucgr.J00336 I
evm.TU.supercontig_247.1 Carica papaya evm.TU.supercontig_247.1 N
Ssrp Drosophila melanogaster FBgn0010278 N
GF12460 Drosophila ananassae FBgn0089497 N
GG19998 Drosophila erecta FBgn0112197 N
GH21151 Drosophila grimshawi FBgn0128613 N
GD25013 Drosophila simulans FBgn0196325 N
GJ21774 Drosophila virilis FBgn0208892 N
GE11532 Drosophila yakuba FBgn0229332 N
fgenesh1_pg.4_#_114 Coccomyxa subellipsoidea C169 fgenesh1_pg.4_#_114 N
fgenesh2_kg.6__1935__AT5G23420.1 Arabidopsis lyrata fgenesh2_kg.6__1935__AT5G23420.1 N
fgeneshCV_pg.C_scaffold_4000123 Chlorella vulgaris fgeneshCV_pg.C_scaffold_4000123 N
GLYMA10G43440 Glycine max GLYMA10G43440 I
GLYMA20G23370 Glycine max GLYMA20G23370 I
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I
GRMZM2G125648 Zea mays GRMZM2G125648 N
GSMUA_AchrUn_randomG05290_001 Musa acuminata GSMUA_AchrUn_randomG05290_001 I
HMEL015307 Heliconius melpomene HMEL015307 N
LDEC020995 Leptinotarsa decemlineata LDEC020995 N
LPERR08G00140 Leersia perrieri LPERR08G00140 N
Lus10041009.g Linum usitatissimum Lus10041009.g N
MDOA007633 Musca domestica MDOA007633 N
MDP0000205665 Malus domestica MDP0000205665 I
mgf009124m Mimulus guttatus mgf009124m N
MLOC_77667 Hordeum vulgare MLOC_77667 I
MTR_8g018100 Medicago truncatula MTR_8g018100 N
OB04G28810 Oryza brachyantha OB04G28810 N
OB08G10120 Oryza brachyantha OB08G10120 N
OBART04G21800 Oryza barthii OBART04G21800 N
OBART08G00070 Oryza barthii OBART08G00070 I
OESDEN_24828 Oesophagostomum dentatum OESDEN_24828 N
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I
OLONG_014445 Oryza longistaminata OLONG_014445 I
OMERI04G18350 Oryza meridionalis OMERI04G18350 N
ONIVA04G20340 Oryza nivara ONIVA04G20340 N
ONIVA08G00070 Oryza nivara ONIVA08G00070 I
OPUNC04G19550 Oryza punctata OPUNC04G19550 N
OPUNC08G00150 Oryza punctata OPUNC08G00150 I
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I
OS04G0564600 Oryza sativa OS04G0564600 N
OS08G0101100 Oryza sativa OS08G0101100 I
Pavir.Fb00026 Panicum virgatum Pavir.Fb00026 N
Pavir.J10680 Panicum virgatum Pavir.J10680 N
PDK_20s1355261g001 Phoenix dactylifera PDK_20s1355261g001 N
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I
PK03866.1 Cannabis sativa PK03866.1 I
Pm006054 Prunus mume Pm006054 I
HMGB6 Populus trichocarpa POPTR_0007s15320 I
PPAI002521 Phlebotomus papatasi PPAI002521 N
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I
Sb07g000230 Sorghum bicolor Sb07g000230 N
Si007288m.g Setaria italica Si007288m.g I
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I
TCM_007659 Theobroma cacao TCM_007659 I
Thhalv10004817m.g Eutrema salsugineum Thhalv10004817m.g N
Traes_7AL_959534EDB Triticum aestivum Traes_7AL_959534EDB I
Traes_7BL_871FCAF2F Triticum aestivum Traes_7BL_871FCAF2F I
Traes_7DL_824BFE90C Triticum aestivum Traes_7DL_824BFE90C I
TRIUR3_35367 Triticum urartu TRIUR3_35367 I
HMGB6 Vitis vinifera VIT_10s0071g00870 I