BRADI1G05430 (Brachypodium distachyon)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 BRADI1G05430 T031585_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.209.40.1
M01756_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8070 		0.852 0.875
LRL2
M06738_2.00 		Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH69_col_a 		0.852 0.833
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G05430.2 bHLH 126 173

Links

Other bHLH family TFs
Other Brachypodium distachyon TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_30957 Aegilops tauschii F775_30957 I 0.888
AMTR_s00065p00184910 Amborella trichopoda AMTR_s00065p00184910 I 0.852
Aquca_016_00200 Aquilegia coerulea Aquca_016_00200 I 0.852
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N 0.873
LRL3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001435 I 0.852
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N 0.861
LRL1 Arabidopsis lyrata fgenesh2_kg.4__341__AT2G24260.1 I 0.852
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N 0.861
LRL2 Arabidopsis lyrata fgenesh2_kg.7__1084__AT4G30980.1 I 0.852
AT1G03040 Arabidopsis thaliana AT1G03040 N 0.861
BHLH66 Arabidopsis thaliana AT2G24260 I 0.852
UNE12 Arabidopsis thaliana AT4G02590 N 0.861
LRL2 Arabidopsis thaliana AT4G30980 D 0.852
BHLH82 Arabidopsis thaliana AT5G58010 I 0.852
Bostr.26833s0448 Boechera stricta Bostr.26833s0448 I 0.852
Bostr.27895s0056 Boechera stricta Bostr.27895s0056 I 0.852
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N 0.861
Bostr.7867s0954 Boechera stricta Bostr.7867s0954 I 0.852
BRADI1G47350 Brachypodium distachyon BRADI1G47350 I 0.852
BRADI1G55427 Brachypodium distachyon BRADI1G55427 I 0.914
Bo01031s030 Brassica oleracea Bo01031s030 N 0.861
Bo1g011740 Brassica oleracea Bo1g011740 I 0.852
Bo2g028920 Brassica oleracea Bo2g028920 I 0.852
Bo2g100750 Brassica oleracea Bo2g100750 N 0.861
Bo3g018990 Brassica oleracea Bo3g018990 I 0.852
Bo4g154370 Brassica oleracea Bo4g154370 I 0.852
Bo5g003580 Brassica oleracea Bo5g003580 N 0.861
Bo8g099910 Brassica oleracea Bo8g099910 I 0.852
Bo9g005930 Brassica oleracea Bo9g005930 N 0.861
Bo9g133640 Brassica oleracea Bo9g133640 I 0.852
Bra000872 Brassica rapa Bra000872 N 0.861
Bra002679 Brassica rapa Bra002679 I 0.852
Bra006788 Brassica rapa Bra006788 I 0.852
Bra007863 Brassica rapa Bra007863 I 0.852
Bra011237 Brassica rapa Bra011237 I 0.852
Bra018539 Brassica rapa Bra018539 N 0.861
Bra020398 Brassica rapa Bra020398 I 0.852
Bra032111 Brassica rapa Bra032111 I 0.852
Bra033368 Brassica rapa Bra033368 N 0.861
Bra036256 Brassica rapa Bra036256 N 0.861
PK14040.1 Cannabis sativa PK14040.1 I 0.852
PK20184.1 Cannabis sativa PK20184.1 N 0.873
PK25419.1 Cannabis sativa PK25419.1 N 0.861
Cagra.0380s0028 Capsella grandiflora Cagra.0380s0028 I 0.852
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N 0.861
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N 0.861
Cagra.2848s0086 Capsella grandiflora Cagra.2848s0086 I 0.852
Cagra.4091s0032 Capsella grandiflora Cagra.4091s0032 I 0.852
Carubv10001523m.g Capsella rubella Carubv10001523m.g N 0.861
Carubv10005248m.g Capsella rubella Carubv10005248m.g I 0.852
Carubv10009831m.g Capsella rubella Carubv10009831m.g N 0.861
Carubv10023532m.g Capsella rubella Carubv10023532m.g I 0.852
Carubv10028492m.g Capsella rubella Carubv10028492m.g I 0.852
evm.TU.contig_30708.1 Carica papaya evm.TU.contig_30708.1 I 0.852
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N 0.873
Ca_03340 Cicer arietinum Ca_03340 I 0.852
Ca_03755 Cicer arietinum Ca_03755 N 0.873
Ca_07790 Cicer arietinum Ca_07790 N 0.861
Ca_12194 Cicer arietinum Ca_12194 N 0.861
Cla011475 Citrullus lanatus Cla011475 N 0.873
Cla013823 Citrullus lanatus Cla013823 I 0.852
Cla015040 Citrullus lanatus Cla015040 N 0.861
Cla019007 Citrullus lanatus Cla019007 I 0.852
Ciclev10001768m.g Citrus clementina Ciclev10001768m.g N 0.852
Ciclev10008192m.g Citrus clementina Ciclev10008192m.g I 0.852
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N 0.861
orange1.1g012156m.g Citrus sinensis orange1.1g012156m.g I 0.852
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N 0.861
Cucsa.132830 Cucumis sativus Cucsa.132830 I 0.852
Cucsa.289090 Cucumis sativus Cucsa.289090 N 0.873
Cucsa.350940 Cucumis sativus Cucsa.350940 I 0.852
Cucsa.388780 Cucumis sativus Cucsa.388780 N 0.861
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N 0.861
Eucgr.C00360 Eucalyptus grandis Eucgr.C00360 I 0.852
Eucgr.C02592 Eucalyptus grandis Eucgr.C02592 I 0.852
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N 0.873
Thhalv10000220m.g Eutrema salsugineum Thhalv10000220m.g I 0.852
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N 0.861
Thhalv10014212m.g Eutrema salsugineum Thhalv10014212m.g I 0.852
Thhalv10025656m.g Eutrema salsugineum Thhalv10025656m.g I 0.852
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N 0.861
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N 0.861
gene10062-v1.0-hybrid Fragaria vesca gene10062-v1.0-hybrid I 0.852
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N 0.873
GLYMA02G16110 Glycine max GLYMA02G16110 N 0.861
GLYMA02G36380 Glycine max GLYMA02G36380 I 0.852
GLYMA03G31510 Glycine max GLYMA03G31510 N 0.861
GLYMA09G14380 Glycine max GLYMA09G14380 I 0.852
GLYMA10G03690 Glycine max GLYMA10G03690 N 0.861
GLYMA10G30430 Glycine max GLYMA10G30430 N 0.873
GLYMA15G33020 Glycine max GLYMA15G33020 I 0.852
GLYMA17G08300 Glycine max GLYMA17G08300 I 0.852
GLYMA19G34360 Glycine max GLYMA19G34360 N 0.861
GLYMA20G36770 Glycine max GLYMA20G36770 N 0.873
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N 0.861
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N 0.861
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N 0.873
Gorai.009G055200 Gossypium raimondii Gorai.009G055200 I 0.852
MLOC_13438 Hordeum vulgare MLOC_13438 I 0.852
MLOC_38567 Hordeum vulgare MLOC_38567 I 0.852
LPERR02G29460 Leersia perrieri LPERR02G29460 I 0.852
LPERR03G31640 Leersia perrieri LPERR03G31640 I 0.914
LPERR07G04600 Leersia perrieri LPERR07G04600 I 0.914
LPERR09G07210 Leersia perrieri LPERR09G07210 I 0.852
Lus10006587.g Linum usitatissimum Lus10006587.g N 0.873
Lus10015909.g Linum usitatissimum Lus10015909.g N 0.873
Lus10021846.g Linum usitatissimum Lus10021846.g I 0.852
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N 0.861
chr5.LjT29J15.30.nc Lotus japonicus chr5.LjT29J15.30.nc N 0.860
chr6.CM0037.770.nc Lotus japonicus chr6.CM0037.770.nc I 0.852
MDP0000121522 Malus domestica MDP0000121522 I 0.852
MDP0000176749 Malus domestica MDP0000176749 N 0.861
MDP0000295593 Malus domestica MDP0000295593 N 0.873
MDP0000534784 Malus domestica MDP0000534784 I 0.852
MDP0000606021 Malus domestica MDP0000606021 I 0.840
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N 0.873
cassava22164.valid.m1 Manihot esculenta cassava22164.valid.m1 I 0.852
cassava22165.valid.m1 Manihot esculenta cassava22165.valid.m1 I 0.852
cassava22704.valid.m1 Manihot esculenta cassava22704.valid.m1 N 0.860
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N 0.861
MTR_1g070870 Medicago truncatula MTR_1g070870 N 0.861
MTR_1g080890 Medicago truncatula MTR_1g080890 N 0.873
MTR_4g131160 Medicago truncatula MTR_4g131160 I 0.852
mgf001459m Mimulus guttatus mgf001459m I 0.852
mgf009435m Mimulus guttatus mgf009435m I 0.852
mgf014585m Mimulus guttatus mgf014585m I 0.852
GSMUA_Achr10G24090_001 Musa acuminata GSMUA_Achr10G24090_001 I 0.852
GSMUA_Achr10G30710_001 Musa acuminata GSMUA_Achr10G30710_001 I 0.852
GSMUA_Achr4G01910_001 Musa acuminata GSMUA_Achr4G01910_001 I 0.852
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I 0.902
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I 0.902
GSMUA_Achr5G16470_001 Musa acuminata GSMUA_Achr5G16470_001 I 0.852
GSMUA_Achr9G25560_001 Musa acuminata GSMUA_Achr9G25560_001 I 0.902
OBART03G37400 Oryza barthii OBART03G37400 I 0.914
OBART06G05420 Oryza barthii OBART06G05420 I 0.852
OBART07G05280 Oryza barthii OBART07G05280 I 0.914
OB06G14990 Oryza brachyantha OB06G14990 I 0.852
OB07G13990 Oryza brachyantha OB07G13990 I 0.914
ORGLA02G0311000 Oryza glaberrima ORGLA02G0311000 I 0.852
ORGLA06G0244900 Oryza glaberrima ORGLA06G0244900 I 0.914
ORGLA07G0044500 Oryza glaberrima ORGLA07G0044500 I 0.914
OGLUM02G37030 Oryza glumaepatula OGLUM02G37030 I 0.852
OGLUM03G37150 Oryza glumaepatula OGLUM03G37150 I 0.914
OGLUM06G05610 Oryza glumaepatula OGLUM06G05610 I 0.852
OGLUM07G04790 Oryza glumaepatula OGLUM07G04790 I 0.914
OGLUM09G10750 Oryza glumaepatula OGLUM09G10750 I 0.852
BGIOSGA013729 Oryza indica BGIOSGA013729 I 0.914
BGIOSGA021777 Oryza indica BGIOSGA021777 I 0.852
BGIOSGA025266 Oryza indica BGIOSGA025266 I 0.914
BGIOSGA029759 Oryza indica BGIOSGA029759 I 0.852
OLONG_014165 Oryza longistaminata OLONG_014165 I 0.914
OMERI02G33790 Oryza meridionalis OMERI02G33790 I 0.852
OMERI03G34570 Oryza meridionalis OMERI03G34570 I 0.914
OMERI05G15760 Oryza meridionalis OMERI05G15760 I 0.914
ONIVA02G37880 Oryza nivara ONIVA02G37880 I 0.852
ONIVA03G38760 Oryza nivara ONIVA03G38760 I 0.914
ONIVA06G06250 Oryza nivara ONIVA06G06250 I 0.852
ONIVA07G04020 Oryza nivara ONIVA07G04020 I 0.914
ONIVA09G10010 Oryza nivara ONIVA09G10010 I 0.852
OPUNC03G34510 Oryza punctata OPUNC03G34510 I 0.914
OPUNC07G05040 Oryza punctata OPUNC07G05040 I 0.914
ORUFI02G37320 Oryza rufipogon ORUFI02G37320 I 0.852
ORUFI06G05560 Oryza rufipogon ORUFI06G05560 I 0.852
ORUFI07G05060 Oryza rufipogon ORUFI07G05060 I 0.914
OS03G0797600 Oryza sativa OS03G0797600 I 0.914
OS06G0184000 Oryza sativa OS06G0184000 I 0.852
Pavir.Aa00205 Panicum virgatum Pavir.Aa00205 I 0.852
Pavir.Ab03158 Panicum virgatum Pavir.Ab03158 I 0.852
Pavir.Ba01914 Panicum virgatum Pavir.Ba01914 I 0.852
Pavir.Ba03672 Panicum virgatum Pavir.Ba03672 I 0.914
Pavir.Bb02117 Panicum virgatum Pavir.Bb02117 I 0.852
Pavir.Da02078 Panicum virgatum Pavir.Da02078 I 0.852
Pavir.J00283 Panicum virgatum Pavir.J00283 I 0.914
Pavir.J03221 Panicum virgatum Pavir.J03221 I 0.914
Pavir.J04249 Panicum virgatum Pavir.J04249 I 0.914
Pavir.J04712 Panicum virgatum Pavir.J04712 I 0.852
e_gw1.173.38.1 Physcomitrella patens e_gw1.173.38.1 I 0.852
e_gw1.209.40.1 Physcomitrella patens e_gw1.209.40.1 D 0.852
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N 0.861
POPTR_0018s11800 Populus trichocarpa POPTR_0018s11800 I 0.852
Pm003525 Prunus mume Pm003525 N 0.873
Pm020229 Prunus mume Pm020229 N 0.861
Pm027715 Prunus mume Pm027715 I 0.852
PRUPE_ppa005254mg Prunus persica PRUPE_ppa005254mg I 0.852
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N 0.873
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N 0.861
29598.m000464 Ricinus communis 29598.m000464 N 0.873
29737.m001209 Ricinus communis 29737.m001209 I 0.852
29883.m001988 Ricinus communis 29883.m001988 N 0.861
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N 0.861
SapurV1A.0100s0120 Salix purpurea SapurV1A.0100s0120 I 0.852
SapurV1A.0347s0080 Salix purpurea SapurV1A.0347s0080 I 0.852
SELMODRAFT_24890 Selaginella moellendorffii SELMODRAFT_24890 I 0.852
SELMODRAFT_24892 Selaginella moellendorffii SELMODRAFT_24892 I 0.852
SELMODRAFT_422025 Selaginella moellendorffii SELMODRAFT_422025 I 0.852
SELMODRAFT_444782 Selaginella moellendorffii SELMODRAFT_444782 I 0.852
Si017553m.g Setaria italica Si017553m.g I 0.852
Si029708m.g Setaria italica Si029708m.g I 0.852
Si030704m.g Setaria italica Si030704m.g I 0.914
Si036929m.g Setaria italica Si036929m.g I 0.914
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N 0.870
Solyc07g005400.2 Solanum lycopersicum Solyc07g005400.2 I 0.841
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N 0.872
Solyc12g010170.1 Solanum lycopersicum Solyc12g010170.1 I 0.852
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N 0.872
PGSC0003DMG400007827 Solanum tuberosum PGSC0003DMG400007827 I 0.852
PGSC0003DMG400011133 Solanum tuberosum PGSC0003DMG400011133 I 0.852
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N 0.872
Sb01g005130 Sorghum bicolor Sb01g005130 I 0.888
Sb02g004570 Sorghum bicolor Sb02g004570 I 0.914
Sb02g024750 Sorghum bicolor Sb02g024750 I 0.852
Sb04g035890 Sorghum bicolor Sb04g035890 I 0.852
Sb10g005650 Sorghum bicolor Sb10g005650 I 0.852
TCM_004217 Theobroma cacao TCM_004217 N 0.861
TCM_026346 Theobroma cacao TCM_026346 N 0.873
TCM_037077 Theobroma cacao TCM_037077 I 0.852
Traes_5BL_DB5410008 Triticum aestivum Traes_5BL_DB5410008 I 0.888
Traes_5DL_1CD573458 Triticum aestivum Traes_5DL_1CD573458 I 0.888
Traes_6AL_FD6EC5EA9 Triticum aestivum Traes_6AL_FD6EC5EA9 I 0.852
TRIUR3_33768 Triticum urartu TRIUR3_33768 I 0.852
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N 0.873
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N 0.861
VIT_11s0037g00040 Vitis vinifera VIT_11s0037g00040 I 0.852
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N 0.873
GRMZM2G004356 Zea mays GRMZM2G004356 I 0.914
GRMZM2G027563 Zea mays GRMZM2G027563 I 0.852
GRMZM2G067654 Zea mays GRMZM2G067654 I 0.852
GRMZM2G162382 Zea mays GRMZM2G162382 I 0.914
GRMZM2G350165 Zea mays GRMZM2G350165 I 0.852