CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G46100
(
Brachypodium distachyon
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
BRADI1G46100
T031606_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G46100.1
bHLH
96
141
QSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAVRYVRFLK
Links
Other
bHLH
family TFs
Other
Brachypodium distachyon
TFs
251 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_4332
Hordeum vulgare
MLOC_4332
N
0.914
BGIOSGA022533
Oryza indica
BGIOSGA022533
N
0.903
LPERR06G06410
Leersia perrieri
LPERR06G06410
N
0.903
OMERI06G08170
Oryza meridionalis
OMERI06G08170
N
0.903
OPUNC06G06640
Oryza punctata
OPUNC06G06640
N
0.903
ORGLA06G0065500
Oryza glaberrima
ORGLA06G0065500
N
0.903
ORUFI06G07280
Oryza rufipogon
ORUFI06G07280
N
0.903
mgf016799m
Mimulus guttatus
mgf016799m
N
0.889
Cla020499
Citrullus lanatus
Cla020499
N
0.873
Cucsa.366890
Cucumis sativus
Cucsa.366890
N
0.873
Sb09g027030
Sorghum bicolor
Sb09g027030
N
0.858
Pavir.Ca00715
Panicum virgatum
Pavir.Ca00715
N
0.858
Pavir.J21430
Panicum virgatum
Pavir.J21430
N
0.858
GSMUA_Achr9G15380_001
Musa acuminata
GSMUA_Achr9G15380_001
N
0.856
POPTR_0007s10950
Populus trichocarpa
POPTR_0007s10950
N
0.856
PGSC0003DMG400004039
Solanum tuberosum
PGSC0003DMG400004039
N
0.855
Solyc02g090950.1
Solanum lycopersicum
Solyc02g090950.1
N
0.855
SapurV1A.0623s0130
Salix purpurea
SapurV1A.0623s0130
N
0.854
BGIOSGA000939
Oryza indica
BGIOSGA000939
N
0.845
GRMZM2G111666
Zea mays
GRMZM2G111666
N
0.845
LPERR01G24260
Leersia perrieri
LPERR01G24260
N
0.845
OB01G37310
Oryza brachyantha
OB01G37310
N
0.845
OBART01G28250
Oryza barthii
OBART01G28250
N
0.845
OGLUM01G32180
Oryza glumaepatula
OGLUM01G32180
N
0.845
OLONG_008667
Oryza longistaminata
OLONG_008667
N
0.845
OMERI05G07470
Oryza meridionalis
OMERI05G07470
N
0.845
ONIVA01G32170
Oryza nivara
ONIVA01G32170
N
0.845
OPUNC01G28050
Oryza punctata
OPUNC01G28050
N
0.845
ORGLA01G0233600
Oryza glaberrima
ORGLA01G0233600
N
0.845
ORUFI01G31350
Oryza rufipogon
ORUFI01G31350
N
0.845
OS01G0707500
Oryza sativa
OS01G0707500
N
0.845
Sb03g032520
Sorghum bicolor
Sb03g032520
N
0.845
Si001743m.g
Setaria italica
Si001743m.g
N
0.845
TRAES3BF075800010CFD_g
Triticum aestivum
TRAES3BF075800010CFD_g
N
0.845
TRIUR3_19402
Triticum urartu
TRIUR3_19402
N
0.845
Pavir.Eb02901
Panicum virgatum
Pavir.Eb02901
N
0.845
AMTR_s00008p00265010
Amborella trichopoda
AMTR_s00008p00265010
N
0.844
HEC2
Arabidopsis thaliana
AT3G50330
N
0.844
HEC3
Arabidopsis thaliana
AT5G09750
N
0.844
HEC1
Arabidopsis thaliana
AT5G67060
N
0.844
BGIOSGA001389
Oryza indica
BGIOSGA001389
N
0.844
BGIOSGA026828
Oryza indica
BGIOSGA026828
N
0.844
BGIOSGA027780
Oryza indica
BGIOSGA027780
N
0.844
BGIOSGA030896
Oryza indica
BGIOSGA030896
N
0.844
Bo1g084640
Brassica oleracea
Bo1g084640
N
0.844
Bo2g009510
Brassica oleracea
Bo2g009510
N
0.844
Bo2g167880
Brassica oleracea
Bo2g167880
N
0.844
Bo7g064100
Brassica oleracea
Bo7g064100
N
0.844
Bo8g079710
Brassica oleracea
Bo8g079710
N
0.844
Bo9g020420
Brassica oleracea
Bo9g020420
N
0.844
Bo9g173860
Brassica oleracea
Bo9g173860
N
0.844
Bra012128
Brassica rapa
Bra012128
N
0.844
Bra028620
Brassica rapa
Bra028620
N
0.844
Bra030002
Brassica rapa
Bra030002
N
0.844
Bra036071
Brassica rapa
Bra036071
N
0.844
Bra036801
Brassica rapa
Bra036801
N
0.844
Bra037128
Brassica rapa
Bra037128
N
0.844
BRADI2G41390
Brachypodium distachyon
BRADI2G41390
N
0.844
BRADI3G13300
Brachypodium distachyon
BRADI3G13300
N
0.844
BRADI3G38250
Brachypodium distachyon
BRADI3G38250
N
0.844
BRADI4G32060
Brachypodium distachyon
BRADI4G32060
N
0.844
F775_04427
Aegilops tauschii
F775_04427
N
0.844
F775_52433
Aegilops tauschii
F775_52433
N
0.844
HEC2
Arabidopsis lyrata
fgenesh2_kg.5__1376__AT3G50330.1
N
0.844
HEC3
Arabidopsis lyrata
fgenesh2_kg.6__929__AT5G09750.1
N
0.844
HEC1
Arabidopsis lyrata
fgenesh2_kg.8__2711__AT5G67060.1
N
0.844
GLYMA01G39360
Glycine max
GLYMA01G39360
N
0.844
GLYMA04G04190
Glycine max
GLYMA04G04190
N
0.844
GLYMA05G19920
Glycine max
GLYMA05G19920
N
0.844
GLYMA06G04380
Glycine max
GLYMA06G04380
N
0.844
GLYMA11G05920
Glycine max
GLYMA11G05920
N
0.844
GLYMA17G19830
Glycine max
GLYMA17G19830
N
0.844
GRMZM2G081816
Zea mays
GRMZM2G081816
N
0.844
GRMZM2G134735
Zea mays
GRMZM2G134735
N
0.844
GRMZM2G354618
Zea mays
GRMZM2G354618
N
0.844
GRMZM2G414252
Zea mays
GRMZM2G414252
N
0.844
GRMZM2G471635
Zea mays
GRMZM2G471635
N
0.844
GRMZM5G812883
Zea mays
GRMZM5G812883
N
0.844
GRMZM5G817854
Zea mays
GRMZM5G817854
N
0.844
GRMZM5G818776
Zea mays
GRMZM5G818776
N
0.844
GSMUA_Achr10G25590_001
Musa acuminata
GSMUA_Achr10G25590_001
N
0.844
GSMUA_Achr5G01290_001
Musa acuminata
GSMUA_Achr5G01290_001
N
0.844
GSMUA_Achr6G18580_001
Musa acuminata
GSMUA_Achr6G18580_001
N
0.844
GSMUA_Achr9G29130_001
Musa acuminata
GSMUA_Achr9G29130_001
N
0.844
LPERR01G17090
Leersia perrieri
LPERR01G17090
N
0.844
LPERR08G01030
Leersia perrieri
LPERR08G01030
N
0.844
LPERR08G14680
Leersia perrieri
LPERR08G14680
N
0.844
LPERR09G09120
Leersia perrieri
LPERR09G09120
N
0.844
MLOC_16429
Hordeum vulgare
MLOC_16429
N
0.844
MTR_5g017210
Medicago truncatula
MTR_5g017210
N
0.844
OB08G10720
Oryza brachyantha
OB08G10720
N
0.844
OBART01G19850
Oryza barthii
OBART01G19850
N
0.844
OGLUM01G23470
Oryza glumaepatula
OGLUM01G23470
N
0.844
OGLUM08G00660
Oryza glumaepatula
OGLUM08G00660
N
0.844
OGLUM08G18600
Oryza glumaepatula
OGLUM08G18600
N
0.844
OGLUM09G13100
Oryza glumaepatula
OGLUM09G13100
N
0.844
OMERI01G18460
Oryza meridionalis
OMERI01G18460
N
0.844
OMERI08G00980
Oryza meridionalis
OMERI08G00980
N
0.844
OMERI09G10060
Oryza meridionalis
OMERI09G10060
N
0.844
ONIVA01G07440
Oryza nivara
ONIVA01G07440
N
0.844
ONIVA03G20840
Oryza nivara
ONIVA03G20840
N
0.844
ONIVA08G00590
Oryza nivara
ONIVA08G00590
N
0.844
ONIVA08G19790
Oryza nivara
ONIVA08G19790
N
0.844
OPUNC01G20250
Oryza punctata
OPUNC01G20250
N
0.844
OPUNC08G00600
Oryza punctata
OPUNC08G00600
N
0.844
OPUNC08G15570
Oryza punctata
OPUNC08G15570
N
0.844
OPUNC09G11020
Oryza punctata
OPUNC09G11020
N
0.844
ORGLA01G0163600
Oryza glaberrima
ORGLA01G0163600
N
0.844
ORGLA08G0155700
Oryza glaberrima
ORGLA08G0155700
N
0.844
ORGLA08G0237200
Oryza glaberrima
ORGLA08G0237200
N
0.844
ORGLA09G0096500
Oryza glaberrima
ORGLA09G0096500
N
0.844
ORUFI08G00650
Oryza rufipogon
ORUFI08G00650
N
0.844
ORUFI08G19930
Oryza rufipogon
ORUFI08G19930
N
0.844
ORUFI09G13650
Oryza rufipogon
ORUFI09G13650
N
0.844
OS01G0566800
Oryza sativa
OS01G0566800
N
0.844
OS08G0108500
Oryza sativa
OS08G0108500
N
0.844
OS09G0455300
Oryza sativa
OS09G0455300
N
0.844
PGSC0003DMG400007964
Solanum tuberosum
PGSC0003DMG400007964
N
0.844
POPTR_0002s12660
Populus trichocarpa
POPTR_0002s12660
N
0.844
POPTR_0005s18210
Populus trichocarpa
POPTR_0005s18210
N
0.844
POPTR_0014s02720
Populus trichocarpa
POPTR_0014s02720
N
0.844
PRUPE_ppa021226mg
Prunus persica
PRUPE_ppa021226mg
N
0.844
Sb02g026530
Sorghum bicolor
Sb02g026530
N
0.844
Sb03g025570
Sorghum bicolor
Sb03g025570
N
0.844
Sb07g000900
Sorghum bicolor
Sb07g000900
N
0.844
Sb07g000910
Sorghum bicolor
Sb07g000910
N
0.844
Sb07g022920
Sorghum bicolor
Sb07g022920
N
0.844
Si003753m.g
Setaria italica
Si003753m.g
N
0.844
Si015197m.g
Setaria italica
Si015197m.g
N
0.844
Si015349m.g
Setaria italica
Si015349m.g
N
0.844
Si030966m.g
Setaria italica
Si030966m.g
N
0.844
Solyc04g078790.2
Solanum lycopersicum
Solyc04g078790.2
N
0.844
TCM_000632
Theobroma cacao
TCM_000632
N
0.844
TCM_033818
Theobroma cacao
TCM_033818
N
0.844
TRAES3BF276900020CFD_g
Triticum aestivum
TRAES3BF276900020CFD_g
N
0.844
Traes_5BL_DDC2491F7
Triticum aestivum
Traes_5BL_DDC2491F7
N
0.844
Traes_6AS_C1A37E015
Triticum aestivum
Traes_6AS_C1A37E015
N
0.844
Traes_7DL_F43F7A9A3
Triticum aestivum
Traes_7DL_F43F7A9A3
N
0.844
TRIUR3_19098
Triticum urartu
TRIUR3_19098
N
0.844
TRIUR3_28638
Triticum urartu
TRIUR3_28638
N
0.844
VIT_07s0031g00550
Vitis vinifera
VIT_07s0031g00550
N
0.844
Ca_01550
Cicer arietinum
Ca_01550
N
0.844
Ca_09282
Cicer arietinum
Ca_09282
N
0.844
Cla015855
Citrullus lanatus
Cla015855
N
0.844
Cla020973
Citrullus lanatus
Cla020973
N
0.844
Cla022928
Citrullus lanatus
Cla022928
N
0.844
Pm005293
Prunus mume
Pm005293
N
0.844
30115.m001220
Ricinus communis
30115.m001220
N
0.844
30170.m013861
Ricinus communis
30170.m013861
N
0.844
cassava41909.m1
Manihot esculenta
cassava41909.m1
N
0.844
cassava45275.m1
Manihot esculenta
cassava45275.m1
N
0.844
cassava8495.m1
Manihot esculenta
cassava8495.m1
N
0.844
Cucsa.352300
Cucumis sativus
Cucsa.352300
N
0.844
Cucsa.360770
Cucumis sativus
Cucsa.360770
N
0.844
Cucsa.396050
Cucumis sativus
Cucsa.396050
N
0.844
estExt_fgenesh1_pg.C_550008
Physcomitrella patens
estExt_fgenesh1_pg.C_550008
N
0.844
fgenesh1_pg.scaffold_273000011
Physcomitrella patens
fgenesh1_pg.scaffold_273000011
N
0.844
gw1.67.189.1
Physcomitrella patens
gw1.67.189.1
N
0.844
mg018414m
Mimulus guttatus
mg018414m
N
0.844
Aquca_007_00665
Aquilegia coerulea
Aquca_007_00665
N
0.844
Bostr.0568s0128
Boechera stricta
Bostr.0568s0128
N
0.844
Bostr.13129s0018
Boechera stricta
Bostr.13129s0018
N
0.844
Bostr.6864s0212
Boechera stricta
Bostr.6864s0212
N
0.844
Cagra.0706s0009
Capsella grandiflora
Cagra.0706s0009
N
0.844
Cagra.1085s0086
Capsella grandiflora
Cagra.1085s0086
N
0.844
Cagra.2428s0003
Capsella grandiflora
Cagra.2428s0003
N
0.844
Carubv10003900m.g
Capsella rubella
Carubv10003900m.g
N
0.844
Carubv10019056m.g
Capsella rubella
Carubv10019056m.g
N
0.844
Carubv10027898m.g
Capsella rubella
Carubv10027898m.g
N
0.844
Ciclev10003815m.g
Citrus clementina
Ciclev10003815m.g
N
0.844
Eucgr.F00216
Eucalyptus grandis
Eucgr.F00216
N
0.844
Eucgr.H01682
Eucalyptus grandis
Eucgr.H01682
N
0.844
Eucgr.H02048
Eucalyptus grandis
Eucgr.H02048
N
0.844
evm.TU.supercontig_49.31
Carica papaya
evm.TU.supercontig_49.31
N
0.844
evm.TU.supercontig_55.142
Carica papaya
evm.TU.supercontig_55.142
N
0.844
gene09115-v1.0-hybrid
Fragaria vesca
gene09115-v1.0-hybrid
N
0.844
gene23830-v1.0-hybrid
Fragaria vesca
gene23830-v1.0-hybrid
N
0.844
Gorai.003G025300
Gossypium raimondii
Gorai.003G025300
N
0.844
Gorai.007G213700
Gossypium raimondii
Gorai.007G213700
N
0.844
Gorai.009G212900
Gossypium raimondii
Gorai.009G212900
N
0.844
Gorai.010G020500
Gossypium raimondii
Gorai.010G020500
N
0.844
Lus10012670.g
Linum usitatissimum
Lus10012670.g
N
0.844
MDP0000123893
Malus domestica
MDP0000123893
N
0.844
MDP0000123894
Malus domestica
MDP0000123894
N
0.844
MDP0000249405
Malus domestica
MDP0000249405
N
0.844
orange1.1g024139m.g
Citrus sinensis
orange1.1g024139m.g
N
0.844
Pavir.Ba02034
Panicum virgatum
Pavir.Ba02034
N
0.844
Pavir.Ea01618
Panicum virgatum
Pavir.Ea01618
N
0.844
Pavir.Eb02113
Panicum virgatum
Pavir.Eb02113
N
0.844
Pavir.Fa00680
Panicum virgatum
Pavir.Fa00680
N
0.844
Pavir.Fa02152
Panicum virgatum
Pavir.Fa02152
N
0.844
Pavir.J20328
Panicum virgatum
Pavir.J20328
N
0.844
Pavir.J21912
Panicum virgatum
Pavir.J21912
N
0.844
Pavir.J39499
Panicum virgatum
Pavir.J39499
N
0.844
SapurV1A.0167s0080
Salix purpurea
SapurV1A.0167s0080
N
0.844
SapurV1A.0423s0010
Salix purpurea
SapurV1A.0423s0010
N
0.844
SapurV1A.2123s0040
Salix purpurea
SapurV1A.2123s0040
N
0.844
Thhalv10004846m.g
Eutrema salsugineum
Thhalv10004846m.g
N
0.844
Thhalv10011068m.g
Eutrema salsugineum
Thhalv10011068m.g
N
0.844
Thhalv10015330m.g
Eutrema salsugineum
Thhalv10015330m.g
N
0.844
PK01043.1
Cannabis sativa
PK01043.1
N
0.844
IND
Arabidopsis thaliana
AT4G00120
N
0.841
Bo3g054830
Brassica oleracea
Bo3g054830
N
0.841
Bra000979
Brassica rapa
Bra000979
N
0.841
IND1
Arabidopsis lyrata
fgenesh2_kg.6__3690__AT4G00120.1
N
0.841
GLYMA04G39210
Glycine max
GLYMA04G39210
N
0.841
GLYMA05G32410
Glycine max
GLYMA05G32410
N
0.841
GLYMA06G15730
Glycine max
GLYMA06G15730
N
0.841
GLYMA08G16570
Glycine max
GLYMA08G16570
N
0.841
GSMUA_Achr8G24970_001
Musa acuminata
GSMUA_Achr8G24970_001
N
0.841
MTR_3g101810
Medicago truncatula
MTR_3g101810
N
0.841
MTR_8g093500
Medicago truncatula
MTR_8g093500
N
0.841
PGSC0003DMG400028657
Solanum tuberosum
PGSC0003DMG400028657
N
0.841
POPTR_0005s06220
Populus trichocarpa
POPTR_0005s06220
N
0.841
XM_002310473.1
Populus trichocarpa
POPTR_0007s03950
N
0.841
PRUPE_ppa021410mg
Prunus persica
PRUPE_ppa021410mg
N
0.841
PRUPE_ppa022938mg
Prunus persica
PRUPE_ppa022938mg
N
0.841
SELMODRAFT_405220
Selaginella moellendorffii
SELMODRAFT_405220
N
0.841
SELMODRAFT_415047
Selaginella moellendorffii
SELMODRAFT_415047
N
0.841
Solyc11g005780.1
Solanum lycopersicum
Solyc11g005780.1
N
0.841
Solyc12g088790.1
Solanum lycopersicum
Solyc12g088790.1
N
0.841
TCM_001435
Theobroma cacao
TCM_001435
N
0.841
HEC3
Vitis vinifera
VIT_04s0044g01040
N
0.841
VIT_18s0001g10400
Vitis vinifera
VIT_18s0001g10400
N
0.841
Ca_02154
Cicer arietinum
Ca_02154
N
0.841
Ca_09667
Cicer arietinum
Ca_09667
N
0.841
Cla008578
Citrullus lanatus
Cla008578
N
0.841
Pm001707
Prunus mume
Pm001707
N
0.841
Pm026380
Prunus mume
Pm026380
N
0.841
30136.m001043
Ricinus communis
30136.m001043
N
0.841
cassava15224.m1
Manihot esculenta
cassava15224.m1
N
0.841
cassava5871.m1
Manihot esculenta
cassava5871.m1
N
0.841
Cucsa.101020
Cucumis sativus
Cucsa.101020
N
0.841
mgf019142m
Mimulus guttatus
mgf019142m
N
0.841
Aquca_010_00306
Aquilegia coerulea
Aquca_010_00306
N
0.841
Aquca_022_00317
Aquilegia coerulea
Aquca_022_00317
N
0.841
Bostr.14547s0021
Boechera stricta
Bostr.14547s0021
N
0.841
Cagra.1261s0004
Capsella grandiflora
Cagra.1261s0004
N
0.841
Carubv10003163m.g
Capsella rubella
Carubv10003163m.g
N
0.841
Eucgr.H04946
Eucalyptus grandis
Eucgr.H04946
N
0.841
gene17881-v1.0-hybrid
Fragaria vesca
gene17881-v1.0-hybrid
N
0.841
Gorai.011G116100
Gossypium raimondii
Gorai.011G116100
N
0.841
Lus10005710.g
Linum usitatissimum
Lus10005710.g
N
0.841
Lus10042647.g
Linum usitatissimum
Lus10042647.g
N
0.841
MDP0000420192
Malus domestica
MDP0000420192
N
0.841
MDP0000711774
Malus domestica
MDP0000711774
N
0.841
SapurV1A.0352s0020
Salix purpurea
SapurV1A.0352s0020
N
0.841
SapurV1A.0550s0030
Salix purpurea
SapurV1A.0550s0030
N
0.841
Thhalv10029526m.g
Eutrema salsugineum
Thhalv10029526m.g
N
0.841
LjSGA_011209.1
Lotus japonicus
LjSGA_011209.1
N
0.841
LjT10C23.20.nc
Lotus japonicus
LjT10C23.20.nc
N
0.841