CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI4G30350
(
Brachypodium distachyon
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
BRADI4G30350
T031699_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.209.40.1
M01756_2.00
Physcomitrella patens
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8070
0.848
0.882
LRL2
M06738_2.00
Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG
Dap-seq
OMalley et al.(2016)
bHLH69_col_a
0.848
0.863
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI4G30350.1
bHLH
258
308
DPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ
Links
Other
bHLH
family TFs
Other
Brachypodium distachyon
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB09G16940
Oryza brachyantha
OB09G16940
I
0.914
OBART09G10360
Oryza barthii
OBART09G10360
I
0.914
OMERI09G08190
Oryza meridionalis
OMERI09G08190
I
0.914
ORGLA09G0076200
Oryza glaberrima
ORGLA09G0076200
I
0.914
ORUFI09G11120
Oryza rufipogon
ORUFI09G11120
I
0.914
Traes_5BL_B820523A7
Triticum aestivum
Traes_5BL_B820523A7
I
0.914
AMTR_s00065p00184910
Amborella trichopoda
AMTR_s00065p00184910
I
0.848
BHLH66
Arabidopsis thaliana
AT2G24260
I
0.848
LRL2
Arabidopsis thaliana
AT4G30980
D
0.848
BHLH82
Arabidopsis thaliana
AT5G58010
I
0.848
BGIOSGA021777
Oryza indica
BGIOSGA021777
I
0.848
BGIOSGA029759
Oryza indica
BGIOSGA029759
I
0.848
Bo1g011740
Brassica oleracea
Bo1g011740
I
0.848
Bo2g028920
Brassica oleracea
Bo2g028920
I
0.848
Bo3g018990
Brassica oleracea
Bo3g018990
I
0.848
Bo4g154370
Brassica oleracea
Bo4g154370
I
0.848
Bo8g099910
Brassica oleracea
Bo8g099910
I
0.848
Bo9g133640
Brassica oleracea
Bo9g133640
I
0.848
Bra002679
Brassica rapa
Bra002679
I
0.848
Bra006788
Brassica rapa
Bra006788
I
0.848
Bra007863
Brassica rapa
Bra007863
I
0.848
Bra011237
Brassica rapa
Bra011237
I
0.848
Bra020398
Brassica rapa
Bra020398
I
0.848
Bra032111
Brassica rapa
Bra032111
I
0.848
BRADI1G47350
Brachypodium distachyon
BRADI1G47350
I
0.848
LRL3
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8001435
I
0.848
LRL1
Arabidopsis lyrata
fgenesh2_kg.4__341__AT2G24260.1
I
0.848
LRL2
Arabidopsis lyrata
fgenesh2_kg.7__1084__AT4G30980.1
I
0.848
GLYMA02G36380
Glycine max
GLYMA02G36380
I
0.848
GLYMA09G14380
Glycine max
GLYMA09G14380
I
0.848
GLYMA15G33020
Glycine max
GLYMA15G33020
I
0.848
GLYMA17G08300
Glycine max
GLYMA17G08300
I
0.848
GRMZM2G027563
Zea mays
GRMZM2G027563
I
0.848
GRMZM2G067654
Zea mays
GRMZM2G067654
I
0.848
GSMUA_Achr10G24090_001
Musa acuminata
GSMUA_Achr10G24090_001
I
0.848
GSMUA_Achr10G30710_001
Musa acuminata
GSMUA_Achr10G30710_001
I
0.848
GSMUA_Achr4G01910_001
Musa acuminata
GSMUA_Achr4G01910_001
I
0.848
LPERR02G29460
Leersia perrieri
LPERR02G29460
I
0.848
LPERR09G07210
Leersia perrieri
LPERR09G07210
I
0.848
MLOC_38567
Hordeum vulgare
MLOC_38567
I
0.848
MTR_4g131160
Medicago truncatula
MTR_4g131160
I
0.848
OB06G14990
Oryza brachyantha
OB06G14990
I
0.848
OBART06G05420
Oryza barthii
OBART06G05420
I
0.848
OGLUM02G37030
Oryza glumaepatula
OGLUM02G37030
I
0.848
OGLUM06G05610
Oryza glumaepatula
OGLUM06G05610
I
0.848
OGLUM09G10750
Oryza glumaepatula
OGLUM09G10750
I
0.848
OMERI02G33790
Oryza meridionalis
OMERI02G33790
I
0.848
ONIVA02G37880
Oryza nivara
ONIVA02G37880
I
0.848
ONIVA06G06250
Oryza nivara
ONIVA06G06250
I
0.848
ONIVA09G10010
Oryza nivara
ONIVA09G10010
I
0.848
ORGLA02G0311000
Oryza glaberrima
ORGLA02G0311000
I
0.848
ORUFI02G37320
Oryza rufipogon
ORUFI02G37320
I
0.848
ORUFI06G05560
Oryza rufipogon
ORUFI06G05560
I
0.848
OS06G0184000
Oryza sativa
OS06G0184000
I
0.848
PGSC0003DMG400007827
Solanum tuberosum
PGSC0003DMG400007827
I
0.848
PGSC0003DMG400011133
Solanum tuberosum
PGSC0003DMG400011133
I
0.848
POPTR_0018s11800
Populus trichocarpa
POPTR_0018s11800
I
0.848
PRUPE_ppa005254mg
Prunus persica
PRUPE_ppa005254mg
I
0.848
Sb02g024750
Sorghum bicolor
Sb02g024750
I
0.848
Sb04g035890
Sorghum bicolor
Sb04g035890
I
0.848
Sb10g005650
Sorghum bicolor
Sb10g005650
I
0.848
SELMODRAFT_422025
Selaginella moellendorffii
SELMODRAFT_422025
I
0.848
SELMODRAFT_444782
Selaginella moellendorffii
SELMODRAFT_444782
I
0.848
Si017553m.g
Setaria italica
Si017553m.g
I
0.848
Si029708m.g
Setaria italica
Si029708m.g
I
0.848
Solyc12g010170.1
Solanum lycopersicum
Solyc12g010170.1
I
0.848
TCM_037077
Theobroma cacao
TCM_037077
I
0.848
Traes_6AL_FD6EC5EA9
Triticum aestivum
Traes_6AL_FD6EC5EA9
I
0.848
TRIUR3_33768
Triticum urartu
TRIUR3_33768
I
0.848
VIT_11s0037g00040
Vitis vinifera
VIT_11s0037g00040
I
0.848
Ca_03340
Cicer arietinum
Ca_03340
I
0.848
Cla013823
Citrullus lanatus
Cla013823
I
0.848
Cla019007
Citrullus lanatus
Cla019007
I
0.848
Pm027715
Prunus mume
Pm027715
I
0.848
29737.m001209
Ricinus communis
29737.m001209
I
0.848
cassava22164.valid.m1
Manihot esculenta
cassava22164.valid.m1
I
0.848
cassava22165.valid.m1
Manihot esculenta
cassava22165.valid.m1
I
0.848
Cucsa.132830
Cucumis sativus
Cucsa.132830
I
0.848
Cucsa.350940
Cucumis sativus
Cucsa.350940
I
0.848
e_gw1.173.38.1
Physcomitrella patens
e_gw1.173.38.1
I
0.848
e_gw1.209.40.1
Physcomitrella patens
e_gw1.209.40.1
D
0.848
mgf001459m
Mimulus guttatus
mgf001459m
I
0.848
mgf009435m
Mimulus guttatus
mgf009435m
I
0.848
mgf014585m
Mimulus guttatus
mgf014585m
I
0.848
Aquca_016_00200
Aquilegia coerulea
Aquca_016_00200
I
0.848
Bostr.26833s0448
Boechera stricta
Bostr.26833s0448
I
0.848
Bostr.27895s0056
Boechera stricta
Bostr.27895s0056
I
0.848
Bostr.7867s0954
Boechera stricta
Bostr.7867s0954
I
0.848
Cagra.0380s0028
Capsella grandiflora
Cagra.0380s0028
I
0.848
Cagra.2848s0086
Capsella grandiflora
Cagra.2848s0086
I
0.848
Cagra.4091s0032
Capsella grandiflora
Cagra.4091s0032
I
0.848
Carubv10005248m.g
Capsella rubella
Carubv10005248m.g
I
0.848
Carubv10023532m.g
Capsella rubella
Carubv10023532m.g
I
0.848
Carubv10028492m.g
Capsella rubella
Carubv10028492m.g
I
0.848
Ciclev10008192m.g
Citrus clementina
Ciclev10008192m.g
I
0.848
Eucgr.C00360
Eucalyptus grandis
Eucgr.C00360
I
0.848
Eucgr.C02592
Eucalyptus grandis
Eucgr.C02592
I
0.848
evm.TU.contig_30708.1
Carica papaya
evm.TU.contig_30708.1
I
0.848
gene10062-v1.0-hybrid
Fragaria vesca
gene10062-v1.0-hybrid
I
0.848
Gorai.009G055200
Gossypium raimondii
Gorai.009G055200
I
0.848
Lus10021846.g
Linum usitatissimum
Lus10021846.g
I
0.848
MDP0000121522
Malus domestica
MDP0000121522
I
0.848
MDP0000534784
Malus domestica
MDP0000534784
I
0.848
orange1.1g012156m.g
Citrus sinensis
orange1.1g012156m.g
I
0.848
Pavir.Aa00205
Panicum virgatum
Pavir.Aa00205
I
0.848
Pavir.Ab03158
Panicum virgatum
Pavir.Ab03158
I
0.848
Pavir.Ba01914
Panicum virgatum
Pavir.Ba01914
I
0.848
Pavir.Bb02117
Panicum virgatum
Pavir.Bb02117
I
0.848
Pavir.Da02078
Panicum virgatum
Pavir.Da02078
I
0.848
Pavir.J04712
Panicum virgatum
Pavir.J04712
I
0.848
SapurV1A.0100s0120
Salix purpurea
SapurV1A.0100s0120
I
0.848
SapurV1A.0347s0080
Salix purpurea
SapurV1A.0347s0080
I
0.848
Thhalv10000220m.g
Eutrema salsugineum
Thhalv10000220m.g
I
0.848
Thhalv10014212m.g
Eutrema salsugineum
Thhalv10014212m.g
I
0.848
Thhalv10025656m.g
Eutrema salsugineum
Thhalv10025656m.g
I
0.848
PK14040.1
Cannabis sativa
PK14040.1
I
0.848
chr6.CM0037.770.nc
Lotus japonicus
chr6.CM0037.770.nc
I
0.848