BRADI4G32967 (Brachypodium distachyon)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 BRADI4G32967 T031704_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fgenesh1_pg.scaffold_37000071
M01757_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8584 		0.885 0.860
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.855 0.840
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.855 0.840
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.855 0.840
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.855 0.840
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G32967.1 bHLH 57 106
BRADI4G32967.2 bHLH 57 106

Links

Other bHLH family TFs
Other Brachypodium distachyon TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA030958 Oryza indica BGIOSGA030958 I 0.914
F775_23096 Aegilops tauschii F775_23096 I 0.914
GRMZM2G009478 Zea mays GRMZM2G009478 I 0.914
GRMZM2G089501 Zea mays GRMZM2G089501 I 0.914
LPERR09G10080 Leersia perrieri LPERR09G10080 I 0.914
OBART09G13850 Oryza barthii OBART09G13850 I 0.914
OGLUM09G14430 Oryza glumaepatula OGLUM09G14430 I 0.914
OLONG_020060 Oryza longistaminata OLONG_020060 I 0.914
OMERI09G10560 Oryza meridionalis OMERI09G10560 I 0.914
ONIVA09G14370 Oryza nivara ONIVA09G14370 I 0.914
OPUNC09G12310 Oryza punctata OPUNC09G12310 I 0.914
ORGLA06G0286200 Oryza glaberrima ORGLA06G0286200 I 0.914
ORGLA09G0105800 Oryza glaberrima ORGLA09G0105800 I 0.914
ORUFI09G14830 Oryza rufipogon ORUFI09G14830 I 0.914
OS09G0475400 Oryza sativa OS09G0475400 I 0.914
Sb02g027460 Sorghum bicolor Sb02g027460 I 0.914
Si029604m.g Setaria italica Si029604m.g I 0.914
Traes_5AL_0D4BDDDCD Triticum aestivum Traes_5AL_0D4BDDDCD I 0.914
Traes_5BL_AAC9C7238 Triticum aestivum Traes_5BL_AAC9C7238 I 0.914
Traes_5DL_E96693018 Triticum aestivum Traes_5DL_E96693018 I 0.914
Pavir.J04606 Panicum virgatum Pavir.J04606 I 0.914
BGIOSGA028888 Oryza indica BGIOSGA028888 I 0.888
BRADI3G38970 Brachypodium distachyon BRADI3G38970 I 0.888
OB08G25940 Oryza brachyantha OB08G25940 I 0.888
OGLUM08G19830 Oryza glumaepatula OGLUM08G19830 I 0.888
OLONG_003583 Oryza longistaminata OLONG_003583 I 0.888
ONIVA08G20800 Oryza nivara ONIVA08G20800 I 0.888
OPUNC08G16820 Oryza punctata OPUNC08G16820 I 0.888
ORGLA08G0164200 Oryza glaberrima ORGLA08G0164200 I 0.888
ORUFI08G21030 Oryza rufipogon ORUFI08G21030 I 0.888
OS08G0490000 Oryza sativa OS08G0490000 I 0.888
SELMODRAFT_451475 Selaginella moellendorffii SELMODRAFT_451475 I 0.888
SELMODRAFT_451477 Selaginella moellendorffii SELMODRAFT_451477 I 0.888
AMTR_s00006p00250310 Amborella trichopoda AMTR_s00006p00250310 I 0.885
GLYMA05G07490 Glycine max GLYMA05G07490 I 0.885
MTR_4g110040 Medicago truncatula MTR_4g110040 I 0.885
POPTR_0015s03550 Populus trichocarpa POPTR_0015s03550 I 0.885
PRUPE_ppa003436mg Prunus persica PRUPE_ppa003436mg I 0.885
Solyc06g069370.2 Solanum lycopersicum Solyc06g069370.2 I 0.885
TCM_014392 Theobroma cacao TCM_014392 I 0.885
BIM1 Vitis vinifera VIT_17s0000g04790 I 0.885
cassava29318.valid.m1 Manihot esculenta cassava29318.valid.m1 I 0.885
cassava43379.valid.m1 Manihot esculenta cassava43379.valid.m1 I 0.885
estExt_fgenesh1_pg.C_2110039 Physcomitrella patens estExt_fgenesh1_pg.C_2110039 I 0.885
fgenesh1_pg.scaffold_37000071 Physcomitrella patens fgenesh1_pg.scaffold_37000071 D 0.885
gw1.90.123.1 Physcomitrella patens gw1.90.123.1 I 0.885
Ciclev10020248m.g Citrus clementina Ciclev10020248m.g I 0.885
evm.TU.supercontig_3.225 Carica papaya evm.TU.supercontig_3.225 I 0.885
orange1.1g038451m.g Citrus sinensis orange1.1g038451m.g I 0.885
SapurV1A.0178s0150 Salix purpurea SapurV1A.0178s0150 I 0.885
SapurV1A.0868s0010 Salix purpurea SapurV1A.0868s0010 I 0.885
GLYMA17G08980 Glycine max GLYMA17G08980 I 0.874
Cucsa.198520 Cucumis sativus Cucsa.198520 I 0.874
GSMUA_Achr9G28050_001 Musa acuminata GSMUA_Achr9G28050_001 I 0.873
GLYMA02G13670 Glycine max GLYMA02G13670 I 0.865
PGSC0003DMG400001919 Solanum tuberosum PGSC0003DMG400001919 I 0.865
PGSC0003DMG400019654 Solanum tuberosum PGSC0003DMG400019654 I 0.865
POPTR_0008s11120 Populus trichocarpa POPTR_0008s11120 I 0.865
POPTR_0010s14740 Populus trichocarpa POPTR_0010s14740 I 0.865
PRUPE_ppa008387mg Prunus persica PRUPE_ppa008387mg I 0.865
Solyc04g005280.2 Solanum lycopersicum Solyc04g005280.2 I 0.865
Solyc05g011810.2 Solanum lycopersicum Solyc05g011810.2 I 0.865
BIM2 Vitis vinifera VIT_01s0010g00540 I 0.865
Cla022382 Citrullus lanatus Cla022382 I 0.865
30138.m003899 Ricinus communis 30138.m003899 I 0.865
cassava29314.valid.m1 Manihot esculenta cassava29314.valid.m1 I 0.865
cassava43370.valid.m1 Manihot esculenta cassava43370.valid.m1 I 0.865
Cucsa.328060 Cucumis sativus Cucsa.328060 I 0.865
mgf013208m Mimulus guttatus mgf013208m I 0.865
Ciclev10032020m.g Citrus clementina Ciclev10032020m.g I 0.865
gene04534-v1.0-hybrid Fragaria vesca gene04534-v1.0-hybrid I 0.865
MDP0000261293 Malus domestica MDP0000261293 I 0.865
orange1.1g019960m.g Citrus sinensis orange1.1g019960m.g I 0.865
SapurV1A.0060s0510 Salix purpurea SapurV1A.0060s0510 I 0.865
SapurV1A.0084s0570 Salix purpurea SapurV1A.0084s0570 I 0.865
PK01364.1 Cannabis sativa PK01364.1 I 0.865
LPERR08G15680 Leersia perrieri LPERR08G15680 I 0.864
GSMUA_Achr2G05450_001 Musa acuminata GSMUA_Achr2G05450_001 I 0.861
GSMUA_Achr4G19530_001 Musa acuminata GSMUA_Achr4G19530_001 I 0.861
GSMUA_Achr9G19110_001 Musa acuminata GSMUA_Achr9G19110_001 I 0.861
30138.m003913 Ricinus communis 30138.m003913 I 0.861
Sb07g028860 Sorghum bicolor Sb07g028860 I 0.858
Si013622m.g Setaria italica Si013622m.g I 0.858
Pavir.Fb01833 Panicum virgatum Pavir.Fb01833 I 0.858
Pavir.J38910 Panicum virgatum Pavir.J38910 I 0.858
BIM1 Arabidopsis thaliana AT5G08130 D 0.855
Bo2g161110 Brassica oleracea Bo2g161110 I 0.855
Bo3g004690 Brassica oleracea Bo3g004690 I 0.855
Bo5g020460 Brassica oleracea Bo5g020460 I 0.855
Bo9g174770 Brassica oleracea Bo9g174770 I 0.855
Bra005969 Brassica rapa Bra005969 I 0.855
Bra009322 Brassica rapa Bra009322 I 0.855
Bra029354 Brassica rapa Bra029354 I 0.855
BIM1 Arabidopsis lyrata scaffold_600819.1 I 0.855
Solyc03g114720.2 Solanum lycopersicum Solyc03g114720.2 I 0.855
Cucsa.113490 Cucumis sativus Cucsa.113490 I 0.855
mgf001137m Mimulus guttatus mgf001137m I 0.855
mgf005849m Mimulus guttatus mgf005849m I 0.855
Aquca_002_00952 Aquilegia coerulea Aquca_002_00952 I 0.855
Bostr.13129s0152 Boechera stricta Bostr.13129s0152 I 0.855
Cagra.1365s0019 Capsella grandiflora Cagra.1365s0019 I 0.855
Carubv10000655m.g Capsella rubella Carubv10000655m.g I 0.855
Eucgr.B00645 Eucalyptus grandis Eucgr.B00645 I 0.855
Thhalv10013181m.g Eutrema salsugineum Thhalv10013181m.g I 0.855
PK10562.1 Cannabis sativa PK10562.1 I 0.855
GLYMA01G09010 Glycine max GLYMA01G09010 I 0.854
BGIOSGA005697 Oryza indica BGIOSGA005697 I 0.852
GRMZM2G317450 Zea mays GRMZM2G317450 I 0.852
OB02G38020 Oryza brachyantha OB02G38020 I 0.852
ORGLA02G0264700 Oryza glaberrima ORGLA02G0264700 I 0.852
OS02G0726700 Oryza sativa OS02G0726700 I 0.852
Sb04g029270 Sorghum bicolor Sb04g029270 I 0.852
Si016505m.g Setaria italica Si016505m.g I 0.852
evm.TU.supercontig_289.6 Carica papaya evm.TU.supercontig_289.6 I 0.852
Pavir.Aa00700 Panicum virgatum Pavir.Aa00700 I 0.852
Pavir.Ab03017 Panicum virgatum Pavir.Ab03017 I 0.852
Lus10007974.g Linum usitatissimum Lus10007974.g I 0.850
Lus10013502.g Linum usitatissimum Lus10013502.g I 0.850
GSMUA_Achr3G10640_001 Musa acuminata GSMUA_Achr3G10640_001 I 0.849
Cla018818 Citrullus lanatus Cla018818 I 0.843
POPTR_0012s06650 Populus trichocarpa POPTR_0012s06650 I 0.842
Gorai.006G269200 Gossypium raimondii Gorai.006G269200 I 0.842
gene26139-v1.0-hybrid Fragaria vesca gene26139-v1.0-hybrid I 0.841