CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BHLHE40
(
Bos taurus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSBTAG00000009863
T033072_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bhlhe40
M00119_2.00
Mus musculus
DCACGTGMN
NKCACGTGH
PBM
Badis et al.(2009)
Bhlhb2_1274
0.914
1.000
Bhlhe40
M01738_2.00
Mus musculus
NCACRNBN
NVNYGTGN
PBM
Weirauch et al.(2014)
pTH4330
0.914
1.000
BHLHE40
M02788_2.00
Homo sapiens
NKCACGTGMH
DKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB2_1
0.914
1.000
Bhlhe40
M02817_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_1
0.914
1.000
Bhlhe40
M02818_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_2
0.914
1.000
BHLHE40
M04126_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX
0.914
1.000
BHLHE40
M07798_2.00
Homo sapiens
DCACGTGMSN
NSKCACGTGH
ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha
0.914
1.000
BHLHE40
M08726_2.00
Homo sapiens
DDCACGTGMS
SKCACGTGHH
Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A
0.914
1.000
Bhlhe40
M08761_2.00
Mus musculus
DCACGTGMS
SKCACGTGH
Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A
0.914
1.000
BHLHE40
M09456_2.00
Homo sapiens
DCACGTGMNN
NNKCACGTGH
Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477
0.914
1.000
BHLHE40
M09842_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BHLHE40_03
0.914
1.000
BHLHE40
M09843_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q2
0.914
1.000
BHLHE40
M09844_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q3
0.914
1.000
BHLHE40
M09845_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STRA13_01
0.914
1.000
BHLHE40
M04127_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX
0.914
1.000
Bhlhe41
M01739_2.00
Mus musculus
NMNCGTGMN
NKCACGNKN
PBM
Weirauch et al.(2014)
pTH5060
0.914
0.981
BHLHE41
M02782_2.00
Homo sapiens
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB3_1
0.914
0.981
BHLHE41
M02783_2.00
Homo sapiens
RKCACGTGAY
RTCACGTGMY
SELEX
Jolma et al.(2013)
BHLHE41_1
0.914
0.981
BHLHE41
M04106_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX
0.914
0.981
BHLHE41
M09833_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q2
0.914
0.981
BHLHE41
M09834_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q3
0.914
0.981
BHLHE41
M04107_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000013008
bHLH
54
108
KLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALT
Links
Other
bHLH
family TFs
Other
Bos taurus
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLHE41
Homo sapiens
ENSG00000123095
D
0.914
BHLHE40
Homo sapiens
ENSG00000134107
D
0.914
Bhlhe40
Mus musculus
ENSMUSG00000030103
D
0.914
Bhlhe41
Mus musculus
ENSMUSG00000030256
D
0.914
BHLHE41
Anolis carolinensis
ENSACAG00000000432
I
0.914
BHLHE40
Anolis carolinensis
ENSACAG00000012577
I
0.914
ENSAMEG00000011905
Ailuropoda melanoleuca
ENSAMEG00000011905
I
0.914
ENSAMEG00000016060
Ailuropoda melanoleuca
ENSAMEG00000016060
I
0.914
ENSAMXG00000007020
Astyanax mexicanus
ENSAMXG00000007020
I
0.890
ENSAMXG00000020366
Astyanax mexicanus
ENSAMXG00000020366
I
0.914
BHLHE41
Bos taurus
ENSBTAG00000030575
I
0.914
BHLHE40
Canis familiaris
ENSCAFG00000005621
I
0.914
ENSCAFG00000031081
Canis familiaris
ENSCAFG00000031081
I
0.914
BHLHE40
Callithrix jacchus
ENSCJAG00000015832
I
0.914
ENSCPOG00000025122
Cavia porcellus
ENSCPOG00000025122
I
0.914
ENSCSAG00000007728
Chlorocebus sabaeus
ENSCSAG00000007728
I
0.914
ENSCSAG00000010905
Chlorocebus sabaeus
ENSCSAG00000010905
I
0.914
bhlhe40
Danio rerio
ENSDARG00000004060
I
0.890
bhlhe41
Danio rerio
ENSDARG00000041691
I
0.914
BHLHE40
Dasypus novemcinctus
ENSDNOG00000035717
I
0.914
ENSDORG00000006908
Dipodomys ordii
ENSDORG00000006908
I
0.914
ENSECAG00000000494
Equus caballus
ENSECAG00000000494
I
0.914
BHLHE40
Equus caballus
ENSECAG00000015069
I
0.914
BHLHE41
Echinops telfairi
ENSETEG00000017468
I
0.914
ENSFALG00000003877
Ficedula albicollis
ENSFALG00000003877
I
0.914
ENSFALG00000013572
Ficedula albicollis
ENSFALG00000013572
I
0.914
BHLHE40
Felis catus
ENSFCAG00000002966
I
0.914
ENSFCAG00000022143
Felis catus
ENSFCAG00000022143
I
0.914
BHLHE40
Gasterosteus aculeatus
ENSGACG00000000659
I
0.914
bhlhe41
Gasterosteus aculeatus
ENSGACG00000011684
I
0.889
bhlhe40
Gasterosteus aculeatus
ENSGACG00000011940
I
0.890
BHLHE40
Gallus gallus
ENSGALG00000008308
I
0.914
BHLHE41
Gorilla gorilla
ENSGGOG00000015498
I
0.914
BHLHE40
Gorilla gorilla
ENSGGOG00000015864
I
0.914
ENSGMOG00000002353
Gadus morhua
ENSGMOG00000002353
I
0.890
ENSGMOG00000003444
Gadus morhua
ENSGMOG00000003444
I
0.858
ENSGMOG00000004494
Gadus morhua
ENSGMOG00000004494
I
0.914
ENSLACG00000013163
Latimeria chalumnae
ENSLACG00000013163
I
0.914
BHLHE40
Loxodonta africana
ENSLAFG00000004896
I
0.914
BHLHE41
Loxodonta africana
ENSLAFG00000030711
I
0.914
ENSLOCG00000010962
Lepisosteus oculatus
ENSLOCG00000010962
I
0.914
ENSLOCG00000015327
Lepisosteus oculatus
ENSLOCG00000015327
I
0.914
ENSMEUG00000010801
Macropus eugenii
ENSMEUG00000010801
I
0.914
ENSMEUG00000013058
Macropus eugenii
ENSMEUG00000013058
I
0.914
BHLHE41
Myotis lucifugus
ENSMLUG00000028371
I
0.914
ENSMMUG00000014588
Macaca mulatta
ENSMMUG00000014588
I
0.914
ENSMMUG00000018629
Macaca mulatta
ENSMMUG00000018629
I
0.914
BHLHE40
Monodelphis domestica
ENSMODG00000004516
I
0.914
BHLHE41
Monodelphis domestica
ENSMODG00000016551
I
0.914
ENSMPUG00000010346
Mustela putorius furo
ENSMPUG00000010346
I
0.914
ENSMPUG00000017029
Mustela putorius furo
ENSMPUG00000017029
I
0.914
ENSNLEG00000003704
Nomascus leucogenys
ENSNLEG00000003704
I
0.914
ENSNLEG00000005307
Nomascus leucogenys
ENSNLEG00000005307
I
0.914
ENSNLEG00000026535
Nomascus leucogenys
ENSNLEG00000026535
I
0.894
BHLHE40
Ornithorhynchus anatinus
ENSOANG00000003764
I
0.914
ENSOARG00000007840
Ovis aries
ENSOARG00000007840
I
0.914
ENSOARG00000019968
Ovis aries
ENSOARG00000019968
I
0.914
BHLHE40
Oryctolagus cuniculus
ENSOCUG00000015177
I
0.914
BHLHE40
Otolemur garnettii
ENSOGAG00000029762
I
0.914
ENSOGAG00000032001
Otolemur garnettii
ENSOGAG00000032001
I
0.914
ENSONIG00000014711
Oreochromis niloticus
ENSONIG00000014711
I
0.889
ENSONIG00000019148
Oreochromis niloticus
ENSONIG00000019148
I
0.914
ENSONIG00000020277
Oreochromis niloticus
ENSONIG00000020277
I
0.890
ENSOPRG00000009637
Ochotona princeps
ENSOPRG00000009637
I
0.914
bhlhe41
Oryzias latipes
ENSORLG00000011401
I
0.889
dec1a
Oryzias latipes
ENSORLG00000012739
I
0.890
dec1b
Oryzias latipes
ENSORLG00000014397
I
0.914
ENSPANG00000006688
Papio anubis
ENSPANG00000006688
I
0.914
ENSPANG00000008563
Papio anubis
ENSPANG00000008563
I
0.914
ENSPFOG00000004275
Poecilia formosa
ENSPFOG00000004275
I
0.890
ENSPFOG00000007800
Poecilia formosa
ENSPFOG00000007800
I
0.914
ENSPFOG00000015542
Poecilia formosa
ENSPFOG00000015542
I
0.889
ENSPMAG00000003684
Petromyzon marinus
ENSPMAG00000003684
I
0.889
ENSPPYG00000004372
Pongo abelii
ENSPPYG00000004372
I
0.914
ENSPPYG00000013696
Pongo abelii
ENSPPYG00000013696
I
0.914
ENSPSIG00000016504
Pelodiscus sinensis
ENSPSIG00000016504
I
0.914
ENSPSIG00000018157
Pelodiscus sinensis
ENSPSIG00000018157
I
0.914
BHLHE41
Pan troglodytes
ENSPTRG00000004779
I
0.914
BHLHE40
Pan troglodytes
ENSPTRG00000014571
I
0.914
BHLHE41
Pteropus vampyrus
ENSPVAG00000004507
I
0.914
BHLHE40
Pteropus vampyrus
ENSPVAG00000007723
I
0.914
Bhlhe40
Rattus norvegicus
ENSRNOG00000007152
I
0.914
Bhlhe41
Rattus norvegicus
ENSRNOG00000048961
I
0.914
ENSSSCG00000011534
Sus scrofa
ENSSSCG00000011534
I
0.914
BHLHE41
Sus scrofa
ENSSSCG00000028552
I
0.914
ENSSTOG00000000793
Ictidomys tridecemlineatus
ENSSTOG00000000793
I
0.914
ENSSTOG00000021007
Ictidomys tridecemlineatus
ENSSTOG00000021007
I
0.914
ENSTGUG00000012230
Taeniopygia guttata
ENSTGUG00000012230
I
0.914
bhlhe40
Tetraodon nigroviridis
ENSTNIG00000007338
I
0.890
bhlhe41
Tetraodon nigroviridis
ENSTNIG00000012152
I
0.889
bhlhe41
Takifugu rubripes
ENSTRUG00000005639
I
0.889
BHLHE40
Takifugu rubripes
ENSTRUG00000011390
I
0.914
bhlhe40
Takifugu rubripes
ENSTRUG00000014524
I
0.890
ENSTSYG00000002535
Tarsius syrichta
ENSTSYG00000002535
I
0.914
BHLHE40
Tursiops truncatus
ENSTTRG00000002786
I
0.914
BHLHE41
Tursiops truncatus
ENSTTRG00000014501
I
0.914
ENSXMAG00000001113
Xiphophorus maculatus
ENSXMAG00000001113
I
0.889
ENSXMAG00000002248
Xiphophorus maculatus
ENSXMAG00000002248
I
0.914
ENSXMAG00000008981
Xiphophorus maculatus
ENSXMAG00000008981
I
0.890
Aan_R007938
Calypte anna
Aan_R007938
I
0.914
Afo_R006295
Aptenodytes forsteri
Afo_R006295
I
0.889
Alligator_sinensis_CCG021907.1
Alligator sinensis
Alligator_sinensis_CCG021907.1
I
0.914
Cmyd_10013122
Chelonia mydas
Cmyd_10013122
I
0.914
Cmyd_10013769
Chelonia mydas
Cmyd_10013769
I
0.914
ENSBTAP00000040772-D1
Bos grunniens
ENSBTAP00000040772-D1
I
0.914
ENSMMUP00000024507
Macaca fascicularis
ENSMMUP00000024507
I
0.914
ENSP00000256495-D1
Bos grunniens
ENSP00000256495-D1
I
0.914
ENSP00000256495
Macaca fascicularis
ENSP00000256495
I
0.914
Gfo_R015175
Geospiza fortis
Gfo_R015175
I
0.914
Myotis_brandtii_BHLHE40_10019553
Myotis brandtii
Myotis_brandtii_BHLHE40_10019553
I
0.914
Myotis_brandtii_BHLHE41_10027341
Myotis brandtii
Myotis_brandtii_BHLHE41_10027341
I
0.914
Pvit_15832
Pogona vitticeps
Pvit_15832
I
0.914
Pvit_19380
Pogona vitticeps
Pvit_19380
I
0.914
bhlhe40.S
Xenopus laevis
XB-GENE-17337587
I
0.890
bhlhe40
Xenopus tropicalis
XB-GENE-486416
I
0.890
bhlhe40.L
Xenopus laevis
XB-GENE-865608
I
0.890
bhlhe41
Xenopus tropicalis
XB-GENE-994875
I
0.914