MSGN1 (Cavia porcellus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCPOG00000003061 T033396_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MSGN1
M04144_2.00
Homo sapiens
NVMCAWWTGGYN

NRCCAWWTGKBN
SELEX
Yin et al.(2017)
MSGN1_eDBD_HT-SELEX
0.894 0.964
Msgn1
M08772_2.00
Mus musculus
NNRMCAAATGGY

RCCATTTGKYNN
Misc
Kulakovskiy et al.(2013)
MSGN1_MOUSE.H11MO.0.C
0.894 0.964
MSGN1
M04145_2.00
Homo sapiens
NRMCAWWTGSYN

NRSCAWWTGKYN
SELEX
Yin et al.(2017)
MSGN1_eDBD_Methyl-HT-SELEX
0.894 0.964
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000002771 bHLH 125 179

Links

Other bHLH family TFs
Other Cavia porcellus TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSACAG00000001604 Anolis carolinensis ENSACAG00000001604 I 0.914
ENSAMEG00000019874 Ailuropoda melanoleuca ENSAMEG00000019874 I 0.894
ENSAPLG00000001852 Anas platyrhynchos ENSAPLG00000001852 I 0.894
MSGN1 Bos taurus ENSBTAG00000039113 I 0.894
MSGN1 Canis familiaris ENSCAFG00000003750 I 0.894
MSGN1 Callithrix jacchus ENSCJAG00000032633 I 0.894
ENSCSAG00000000377 Chlorocebus sabaeus ENSCSAG00000000377 I 0.894
MSGN1 Dasypus novemcinctus ENSDNOG00000013441 I 0.894
Msgn1 Dipodomys ordii ENSDORG00000003509 I 0.894
MSGN1 Equus caballus ENSECAG00000002724 I 0.894
MSGN1 Erinaceus europaeus ENSEEUG00000015222 I 0.894
ENSFALG00000001820 Ficedula albicollis ENSFALG00000001820 I 0.894
MSGN1 Felis catus ENSFCAG00000013583 I 0.894
MSGN1 Homo sapiens ENSG00000151379 D 0.894
MSGN1 Gorilla gorilla ENSGGOG00000012168 I 0.894
MSGN1 Loxodonta africana ENSLAFG00000015319 I 0.894
MSGN1 Meleagris gallopavo ENSMGAG00000016374 I 0.894
ENSMICG00000010842 Microcebus murinus ENSMICG00000010842 I 0.894
MSGN1 Myotis lucifugus ENSMLUG00000007599 I 0.894
MSGN1 Macaca mulatta ENSMMUG00000008141 I 0.894
ENSMPUG00000019484 Mustela putorius furo ENSMPUG00000019484 I 0.894
Msgn1 Mus musculus ENSMUSG00000047002 D 0.894
ENSNLEG00000018810 Nomascus leucogenys ENSNLEG00000018810 I 0.894
MSGN1 Ornithorhynchus anatinus ENSOANG00000002188 I 0.894
ENSOARG00000016765 Ovis aries ENSOARG00000016765 I 0.894
MSGN1 Oryctolagus cuniculus ENSOCUG00000000309 I 0.894
MSGN1 Otolemur garnettii ENSOGAG00000012569 I 0.894
ENSPANG00000004064 Papio anubis ENSPANG00000004064 I 0.894
MSGN1 Procavia capensis ENSPCAG00000015116 I 0.894
ENSPPYG00000012628 Pongo abelii ENSPPYG00000012628 I 0.894
MSGN1 Pan troglodytes ENSPTRG00000011679 I 0.894
MSGN1 Pteropus vampyrus ENSPVAG00000015666 I 0.894
Msgn1 Rattus norvegicus ENSRNOG00000028518 I 0.894
MSGN1 Sorex araneus ENSSARG00000007866 I 0.894
MSGN1 Sus scrofa ENSSSCG00000026538 I 0.894
ENSSTOG00000013981 Ictidomys tridecemlineatus ENSSTOG00000013981 I 0.894
MSGN1 Tupaia belangeri ENSTBEG00000001387 I 0.894
MSGN1 Taeniopygia guttata ENSTGUG00000013122 I 0.894
ENSTSYG00000003733 Tarsius syrichta ENSTSYG00000003733 I 0.894
MSGN1 Tursiops truncatus ENSTTRG00000015917 I 0.894
Aan_R015364 Calypte anna Aan_R015364 I 0.894
Afo_R001760 Aptenodytes forsteri Afo_R001760 I 0.894
Alligator_sinensis_CCG020380.1 Alligator sinensis Alligator_sinensis_CCG020380.1 I 0.894
Brh_R011720 Buceros rhinoceros Brh_R011720 I 0.894
ENSP00000281047-D1 Bos grunniens ENSP00000281047-D1 I 0.894
ENSP00000281047 Macaca fascicularis ENSP00000281047 I 0.894
Gfo_R015241 Geospiza fortis Gfo_R015241 I 0.894
Myotis_brandtii_MSGN1_10020188 Myotis brandtii Myotis_brandtii_MSGN1_10020188 I 0.894
Tal_R008386 Tyto alba Tal_R008386 I 0.894
Pvit_07087 Pogona vitticeps Pvit_07087 I 0.893
Ogr03919 Ophisaurus gracilis Ogr03919 I 0.879
MSGN1 Gallus gallus ENSGALG00000016469 I 0.873
ENSMEUG00000006206 Macropus eugenii ENSMEUG00000006206 I 0.859
MSGN1 Monodelphis domestica ENSMODG00000004056 I 0.859