CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MSGN1
(
Cavia porcellus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSCPOG00000003061
T033396_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MSGN1
M04144_2.00
Homo sapiens
NVMCAWWTGGYN
NRCCAWWTGKBN
SELEX
Yin et al.(2017)
MSGN1_eDBD_HT-SELEX
0.894
0.964
Msgn1
M08772_2.00
Mus musculus
NNRMCAAATGGY
RCCATTTGKYNN
Misc
Kulakovskiy et al.(2013)
MSGN1_MOUSE.H11MO.0.C
0.894
0.964
MSGN1
M04145_2.00
Homo sapiens
NRMCAWWTGSYN
NRSCAWWTGKYN
SELEX
Yin et al.(2017)
MSGN1_eDBD_Methyl-HT-SELEX
0.894
0.964
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000002771
bHLH
125
179
RRRKASEREKLRMRTLAEALHTLRNYLPPIYSQRGQPLTKIQTLKYTIKYIGELT
Links
Other
bHLH
family TFs
Other
Cavia porcellus
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSACAG00000001604
Anolis carolinensis
ENSACAG00000001604
I
0.914
ENSAMEG00000019874
Ailuropoda melanoleuca
ENSAMEG00000019874
I
0.894
ENSAPLG00000001852
Anas platyrhynchos
ENSAPLG00000001852
I
0.894
MSGN1
Bos taurus
ENSBTAG00000039113
I
0.894
MSGN1
Canis familiaris
ENSCAFG00000003750
I
0.894
MSGN1
Callithrix jacchus
ENSCJAG00000032633
I
0.894
ENSCSAG00000000377
Chlorocebus sabaeus
ENSCSAG00000000377
I
0.894
MSGN1
Dasypus novemcinctus
ENSDNOG00000013441
I
0.894
Msgn1
Dipodomys ordii
ENSDORG00000003509
I
0.894
MSGN1
Equus caballus
ENSECAG00000002724
I
0.894
MSGN1
Erinaceus europaeus
ENSEEUG00000015222
I
0.894
ENSFALG00000001820
Ficedula albicollis
ENSFALG00000001820
I
0.894
MSGN1
Felis catus
ENSFCAG00000013583
I
0.894
MSGN1
Homo sapiens
ENSG00000151379
D
0.894
MSGN1
Gorilla gorilla
ENSGGOG00000012168
I
0.894
MSGN1
Loxodonta africana
ENSLAFG00000015319
I
0.894
MSGN1
Meleagris gallopavo
ENSMGAG00000016374
I
0.894
ENSMICG00000010842
Microcebus murinus
ENSMICG00000010842
I
0.894
MSGN1
Myotis lucifugus
ENSMLUG00000007599
I
0.894
MSGN1
Macaca mulatta
ENSMMUG00000008141
I
0.894
ENSMPUG00000019484
Mustela putorius furo
ENSMPUG00000019484
I
0.894
Msgn1
Mus musculus
ENSMUSG00000047002
D
0.894
ENSNLEG00000018810
Nomascus leucogenys
ENSNLEG00000018810
I
0.894
MSGN1
Ornithorhynchus anatinus
ENSOANG00000002188
I
0.894
ENSOARG00000016765
Ovis aries
ENSOARG00000016765
I
0.894
MSGN1
Oryctolagus cuniculus
ENSOCUG00000000309
I
0.894
MSGN1
Otolemur garnettii
ENSOGAG00000012569
I
0.894
ENSPANG00000004064
Papio anubis
ENSPANG00000004064
I
0.894
MSGN1
Procavia capensis
ENSPCAG00000015116
I
0.894
ENSPPYG00000012628
Pongo abelii
ENSPPYG00000012628
I
0.894
MSGN1
Pan troglodytes
ENSPTRG00000011679
I
0.894
MSGN1
Pteropus vampyrus
ENSPVAG00000015666
I
0.894
Msgn1
Rattus norvegicus
ENSRNOG00000028518
I
0.894
MSGN1
Sorex araneus
ENSSARG00000007866
I
0.894
MSGN1
Sus scrofa
ENSSSCG00000026538
I
0.894
ENSSTOG00000013981
Ictidomys tridecemlineatus
ENSSTOG00000013981
I
0.894
MSGN1
Tupaia belangeri
ENSTBEG00000001387
I
0.894
MSGN1
Taeniopygia guttata
ENSTGUG00000013122
I
0.894
ENSTSYG00000003733
Tarsius syrichta
ENSTSYG00000003733
I
0.894
MSGN1
Tursiops truncatus
ENSTTRG00000015917
I
0.894
Aan_R015364
Calypte anna
Aan_R015364
I
0.894
Afo_R001760
Aptenodytes forsteri
Afo_R001760
I
0.894
Alligator_sinensis_CCG020380.1
Alligator sinensis
Alligator_sinensis_CCG020380.1
I
0.894
Brh_R011720
Buceros rhinoceros
Brh_R011720
I
0.894
ENSP00000281047-D1
Bos grunniens
ENSP00000281047-D1
I
0.894
ENSP00000281047
Macaca fascicularis
ENSP00000281047
I
0.894
Gfo_R015241
Geospiza fortis
Gfo_R015241
I
0.894
Myotis_brandtii_MSGN1_10020188
Myotis brandtii
Myotis_brandtii_MSGN1_10020188
I
0.894
Tal_R008386
Tyto alba
Tal_R008386
I
0.894
Pvit_07087
Pogona vitticeps
Pvit_07087
I
0.893
Ogr03919
Ophisaurus gracilis
Ogr03919
I
0.879
MSGN1
Gallus gallus
ENSGALG00000016469
I
0.873
ENSMEUG00000006206
Macropus eugenii
ENSMEUG00000006206
I
0.859
MSGN1
Monodelphis domestica
ENSMODG00000004056
I
0.859