NHLH2 (Cavia porcellus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCPOG00000026593 T033473_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Nhlh2
M00756_2.00
Mus musculus
NKCAGCTGHN

NDCAGCTGMN
PBM
Weirauch et al.(2013)
pTH3037
0.914 1.000
NHLH2
M04177_2.00
Homo sapiens
DDGNMGCAGCTGCGYCMH

DKGRCGCAGCTGCKNCHH
SELEX
Yin et al.(2017)
NHLH2_FL_HT-SELEX
0.914 1.000
NHLH2
M09878_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEN2_Q2
0.914 1.000
NHLH2
M04178_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH

DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH2_FL_Methyl-HT-SELEX
0.914 1.000
NHLH1
M02796_2.00
Homo sapiens
CGCAGCTGCB

VGCAGCTGCG
SELEX
Jolma et al.(2013)
NHLH1_1
0.914 0.981
NHLH1
M02797_2.00
Homo sapiens
VGCAGCTGCK

MGCAGCTGCB
SELEX
Jolma et al.(2013)
NHLH1_2
0.914 0.981
NHLH1
M04162_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH

DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_eDBD_HT-SELEX
0.914 0.981
NHLH1
M04164_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH

DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_FL_HT-SELEX
0.914 0.981
Nhlh1
M08773_2.00
Mus musculus
BKGGNMNCAGCTGCGBCCYY

RRGGVCGCAGCTGNKNCCMV
Misc
Kulakovskiy et al.(2013)
HEN1_MOUSE.H11MO.0.C
0.914 0.981
NHLH1
M09875_2.00
Homo sapiens
NNDGGNMVCAGCTGVGNCCNNN

NNNGGNCBCAGCTGBKNCCHNN
Transfac
Matys et al.(2006)
V$HEN1_01
0.914 0.981
NHLH1
M09876_2.00
Homo sapiens
NDRGGVMGCAGCTGMKNCCHHN

NDDGGNMKCAGCTGCKBCCYHN
Transfac
Matys et al.(2006)
V$HEN1_02
0.914 0.981
NHLH1
M04163_2.00
Homo sapiens
NRGBMKCAGCTGCGYCCH

DGGRCGCAGCTGMKVCYN
SELEX
Yin et al.(2017)
NHLH1_eDBD_Methyl-HT-SELEX
0.914 0.981
NHLH1
M04165_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH

DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH1_FL_Methyl-HT-SELEX
0.914 0.981
HLH4C
M03609_2.00
Drosophila melanogaster
DDNCRCAGCTGYGNHH

DDNCRCAGCTGYGNHH
SELEX
Nitta et al.(2015)
HLH4C_1
0.891 0.904
HLH4C
M03610_2.00
Drosophila melanogaster
DRSMYCAGCTGVKSYH

DRSMBCAGCTGRKSYH
SELEX
Nitta et al.(2015)
HLH4C_2
0.891 0.904
HLH4C
M03611_2.00
Drosophila melanogaster
NRBMYCAGCTGYGNHH

DDNCRCAGCTGRKVYN
SELEX
Nitta et al.(2015)
HLH4C_3
0.891 0.904
HLH4C
M05963_2.00
Drosophila melanogaster
CACCTGMDCC

GGHKCAGGTG
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_3_FBgn0011277
0.891 0.904
HLH4C
M05964_2.00
Drosophila melanogaster
MCAYCTGMGMMM

KKKCKCAGRTGK
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_4_FBgn0011277
0.891 0.904
HLH4C
M05965_2.00
Drosophila melanogaster
VNHHVCACCTGMBNC

GNVKCAGGTGBDDNB
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_FBgn0011277
0.891 0.904
HLH4C
M05966_2.00
Drosophila melanogaster
RGSMYCAGCTGCGYY

RRCGCAGCTGRKSCY
B1H
Zhu et al.(2011)
HLH4C_SANGER_5_FBgn0011277
0.891 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000015430 bHLH 78 130

Links

Other bHLH family TFs
Other Cavia porcellus TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R007988 Calypte anna Aan_R007988 N
ACEP14936 Atta cephalotes ACEP14936 N
ACEP21807 Atta cephalotes ACEP21807 N
Afo_R000495 Aptenodytes forsteri Afo_R000495 N
Alligator_sinensis_CCG000862.1 Alligator sinensis Alligator_sinensis_CCG000862.1 N
Brh_R013374 Buceros rhinoceros Brh_R013374 N
Cflo_02462--XP_391937.2_APIME Camponotus floridanus Cflo_02462--XP_391937.2_APIME N
Cmyd_10005570 Chelonia mydas Cmyd_10005570 N
CPIJ006378 Culex quinquefasciatus CPIJ006378 N
CpipJ_CPIJ006378 Culex pipiens CpipJ_CPIJ006378 N
ENSAMEG00000018716 Ailuropoda melanoleuca ENSAMEG00000018716 N
ENSAMXG00000020327 Astyanax mexicanus ENSAMXG00000020327 N
ENSAPLG00000000714 Anas platyrhynchos ENSAPLG00000000714 N
NPAS1 Bos taurus ENSBTAG00000015576 N
NPAS1 Canis familiaris ENSCAFG00000032405 N
NPAS3 Choloepus hoffmanni ENSCHOG00000013756 N
NPAS3 Callithrix jacchus ENSCJAG00000005437 N
NPAS1 Callithrix jacchus ENSCJAG00000011666 N
NPAS3 Cavia porcellus ENSCPOG00000006976 N
NPAS1 Cavia porcellus ENSCPOG00000023069 N
ENSCSAG00000003006 Chlorocebus sabaeus ENSCSAG00000003006 N
npas1 Danio rerio ENSDARG00000015876 N
NPAS1 Dasypus novemcinctus ENSDNOG00000035321 N
Npas3 Dipodomys ordii ENSDORG00000000860 N
ENSECAG00000004630 Equus caballus ENSECAG00000004630 N
NPAS3 Erinaceus europaeus ENSEEUG00000006528 N
NPAS3 Echinops telfairi ENSETEG00000016603 N
NPAS1 Felis catus ENSFCAG00000004833 N
NPAS1 Homo sapiens ENSG00000130751 N
NPAS3 Homo sapiens ENSG00000151322 N
NPAS3 Gallus gallus ENSGALG00000029022 N
NPAS1 Gorilla gorilla ENSGGOG00000013398 N
NPAS3 Gorilla gorilla ENSGGOG00000022941 N
ENSGMOG00000016149 Gadus morhua ENSGMOG00000016149 N
ENSLACG00000001145 Latimeria chalumnae ENSLACG00000001145 N
NPAS3 Loxodonta africana ENSLAFG00000007169 N
ENSLOCG00000009512 Lepisosteus oculatus ENSLOCG00000009512 N
ENSLOCG00000014899 Lepisosteus oculatus ENSLOCG00000014899 N
ENSMEUG00000000606 Macropus eugenii ENSMEUG00000000606 N
ENSMEUG00000012966 Macropus eugenii ENSMEUG00000012966 N
ENSMGAG00000016559 Meleagris gallopavo ENSMGAG00000016559 N
NPAS1 Microcebus murinus ENSMICG00000006346 N
NPAS1 Macaca mulatta ENSMMUG00000011330 N
NPAS3 Macaca mulatta ENSMMUG00000014839 N
NPAS1 Monodelphis domestica ENSMODG00000009053 N
ENSMODG00000024103 Monodelphis domestica ENSMODG00000024103 N
ENSMPUG00000001046 Mustela putorius furo ENSMPUG00000001046 N
ENSMPUG00000005118 Mustela putorius furo ENSMPUG00000005118 N
Npas1 Mus musculus ENSMUSG00000001988 N
Npas3 Mus musculus ENSMUSG00000021010 N
ENSNLEG00000002946 Nomascus leucogenys ENSNLEG00000002946 N
ENSNLEG00000003239 Nomascus leucogenys ENSNLEG00000003239 N
ENSOANG00000014043 Ornithorhynchus anatinus ENSOANG00000014043 N
ENSOARG00000010869 Ovis aries ENSOARG00000010869 N
NPAS1 Otolemur garnettii ENSOGAG00000012829 N
NPAS3 Otolemur garnettii ENSOGAG00000014886 N
NPAS3 Ochotona princeps ENSOPRG00000008184 N
NPAS1 Ochotona princeps ENSOPRG00000014860 N
ENSORLG00000006931 Oryzias latipes ENSORLG00000006931 N
NPAS3 Oryzias latipes ENSORLG00000018065 N
ENSP00000348460 Macaca fascicularis ENSP00000348460 N
ENSP00000348460-D1 Bos grunniens ENSP00000348460-D1 N
ENSP00000405290 Macaca fascicularis ENSP00000405290 N
ENSPANG00000014704 Papio anubis ENSPANG00000014704 N
ENSPCAG00000000784 Procavia capensis ENSPCAG00000000784 N
NPAS3 Procavia capensis ENSPCAG00000007391 N
ENSPFOG00000008940 Poecilia formosa ENSPFOG00000008940 N
ENSPMAG00000007632 Petromyzon marinus ENSPMAG00000007632 N
ENSPPYG00000010165 Pongo abelii ENSPPYG00000010165 N
ENSPSIG00000017052 Pelodiscus sinensis ENSPSIG00000017052 N
NPAS3 Pan troglodytes ENSPTRG00000006249 N
NPAS1 Pan troglodytes ENSPTRG00000011199 N
Npas1 Rattus norvegicus ENSRNOG00000015376 N
NPAS3 Sorex araneus ENSSARG00000003164 N
ENSSARG00000014127 Sorex araneus ENSSARG00000014127 N
ENSSHAG00000011475 Sarcophilus harrisii ENSSHAG00000011475 N
NPAS1 Sus scrofa ENSSSCG00000003108 N
ENSSSCG00000024473 Sus scrofa ENSSSCG00000024473 N
ENSSTOG00000003396 Ictidomys tridecemlineatus ENSSTOG00000003396 N
ENSSTOG00000014736 Ictidomys tridecemlineatus ENSSTOG00000014736 N
NPAS3 Tupaia belangeri ENSTBEG00000016041 N
ENSTGUG00000011911 Taeniopygia guttata ENSTGUG00000011911 N
npas1 Takifugu rubripes ENSTRUG00000012318 N
NPAS3 Tursiops truncatus ENSTTRG00000003266 N
NPAS1 Tursiops truncatus ENSTTRG00000011416 N
NPAS3 Vicugna pacos ENSVPAG00000001108 N
ENSXMAG00000004213 Xiphophorus maculatus ENSXMAG00000004213 N
Gfo_R012966 Geospiza fortis Gfo_R012966 N
HelroG63031 Helobdella robusta HelroG63031 N
Hsal_10736--XP_391937.2_APIME Harpegnathos saltator Hsal_10736--XP_391937.2_APIME N
L798_01241 Zootermopsis nevadensis L798_01241 N
LCUP010821 Lucilia cuprina LCUP010821 N
LDEC011477 Leptinotarsa decemlineata LDEC011477 N
MDOA009035 Musca domestica MDOA009035 N
NEMVEDRAFT_v1g96877 Nematostella vectensis NEMVEDRAFT_v1g96877 N
NV13641 Nasonia vitripennis NV13641 N
PHUM613040 Pediculus humanus PHUM613040 N
Pvit_04747 Pogona vitticeps Pvit_04747 N
Sakowv30006415m.g Saccoglossus kowalevskii Sakowv30006415m.g N
SPU_014249 Strongylocentrotus purpuratus SPU_014249 N
Tal_R006980 Tyto alba Tal_R006980 N
TC001448 Tribolium castaneum TC001448 N
npas3 Xenopus tropicalis XB-GENE-999791 N