ENSLOCG00000006013 (Lepisosteus oculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLOCG00000006013 T035017_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.914 0.923
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.914 0.923
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.914 0.923
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.923
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.923
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.923
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.923
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.923
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.923
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.923
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.886 0.885
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.886 0.885
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.886 0.885
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.886 0.885
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.886 0.885
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.886 0.885
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.886 0.885
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.886 0.885
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.886 0.885
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.886 0.885
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.886 0.885
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.886 0.885
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.886 0.885
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.886 0.885
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.886 0.846
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.886 0.846
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.886 0.846
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.884 0.885
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.884 0.885
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.884 0.885
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.884 0.885
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.884 0.885
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.884 0.885
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.884 0.885
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.884 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000007277 bHLH 568 621

Links

Other bHLH family TFs
Other Lepisosteus oculatus TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00024p00098860 Amborella trichopoda AMTR_s00024p00098860 I
AtIDD16 Arabidopsis thaliana AT1G25250 I
IDD14 Arabidopsis thaliana AT1G68130 I
SGR5 Arabidopsis thaliana AT2G01940 D
BGIOSGA011151 Oryza indica BGIOSGA011151 I
BGIOSGA030871 Oryza indica BGIOSGA030871 I
Bo2g134790 Brassica oleracea Bo2g134790 I
Bo3g139880 Brassica oleracea Bo3g139880 I
Bo5g043540 Brassica oleracea Bo5g043540 I
Bo6g097320 Brassica oleracea Bo6g097320 I
Bo6g106560 Brassica oleracea Bo6g106560 I
Bo9g070370 Brassica oleracea Bo9g070370 I
Bostr.0556s0022 Boechera stricta Bostr.0556s0022 I
Bostr.15697s0010 Boechera stricta Bostr.15697s0010 I
Bostr.26959s0085 Boechera stricta Bostr.26959s0085 I
Bra004050 Brassica rapa Bra004050 I
Bra004283 Brassica rapa Bra004283 I
Bra010981 Brassica rapa Bra010981 I
Bra017432 Brassica rapa Bra017432 I
Bra024771 Brassica rapa Bra024771 I
Bra026624 Brassica rapa Bra026624 I
BRADI1G68730 Brachypodium distachyon BRADI1G68730 I
BRADI3G37890 Brachypodium distachyon BRADI3G37890 I
BRADI4G31770 Brachypodium distachyon BRADI4G31770 I
Cagra.1111s0006 Capsella grandiflora Cagra.1111s0006 I
Cagra.2231s0014 Capsella grandiflora Cagra.2231s0014 I
Cagra.3834s0006 Capsella grandiflora Cagra.3834s0006 I
Carubv10009424m.g Capsella rubella Carubv10009424m.g I
Carubv10017254m.g Capsella rubella Carubv10017254m.g I
Carubv10020337m.g Capsella rubella Carubv10020337m.g I
cassava1947.valid.m1 Manihot esculenta cassava1947.valid.m1 I
Ca_22171 Cicer arietinum Ca_22171 I
chr4.CM0387.280.nc Lotus japonicus chr4.CM0387.280.nc I
Cla005913 Citrullus lanatus Cla005913 I
Eucgr.G02066 Eucalyptus grandis Eucgr.G02066 I
Eucgr.H00574 Eucalyptus grandis Eucgr.H00574 I
Eucgr.K02292 Eucalyptus grandis Eucgr.K02292 I
F775_43255 Aegilops tauschii F775_43255 I
AtIDD14 Arabidopsis lyrata fgenesh2_kg.2__1036__AT1G68130.1 I
SGR5 Arabidopsis lyrata fgenesh2_kg.5__108__AT2G01940.1 I
gene00618-v1.0-hybrid Fragaria vesca gene00618-v1.0-hybrid I
GLYMA05G33590 Glycine max GLYMA05G33590 I
GLYMA07G12170 Glycine max GLYMA07G12170 I
GLYMA08G06130 Glycine max GLYMA08G06130 I
GLYMA09G30030 Glycine max GLYMA09G30030 I
GRMZM2G074032 Zea mays GRMZM2G074032 I
GRMZM2G110107 Zea mays GRMZM2G110107 I
GRMZM2G141031 Zea mays GRMZM2G141031 I
GRMZM2G465595 Zea mays GRMZM2G465595 I
GSMUA_Achr5G23130_001 Musa acuminata GSMUA_Achr5G23130_001 I
GSMUA_Achr6G02490_001 Musa acuminata GSMUA_Achr6G02490_001 I
GSMUA_Achr7G18610_001 Musa acuminata GSMUA_Achr7G18610_001 I
LPERR03G08760 Leersia perrieri LPERR03G08760 I
LPERR08G14510 Leersia perrieri LPERR08G14510 I
LPERR09G08790 Leersia perrieri LPERR09G08790 I
mgf008235m Mimulus guttatus mgf008235m I
MLOC_57613 Hordeum vulgare MLOC_57613 I
OB09G18760 Oryza brachyantha OB09G18760 I
OBART08G17550 Oryza barthii OBART08G17550 I
OBART09G12250 Oryza barthii OBART09G12250 I
OGLUM03G09920 Oryza glumaepatula OGLUM03G09920 I
OGLUM08G18370 Oryza glumaepatula OGLUM08G18370 I
OGLUM09G12720 Oryza glumaepatula OGLUM09G12720 I
OMERI03G09110 Oryza meridionalis OMERI03G09110 I
OMERI08G14120 Oryza meridionalis OMERI08G14120 I
OMERI09G13410 Oryza meridionalis OMERI09G13410 I
ONIVA03G10380 Oryza nivara ONIVA03G10380 I
ONIVA08G19430 Oryza nivara ONIVA08G19430 I
ONIVA09G13010 Oryza nivara ONIVA09G13010 I
OPUNC03G09440 Oryza punctata OPUNC03G09440 I
OPUNC08G15410 Oryza punctata OPUNC08G15410 I
OPUNC09G10740 Oryza punctata OPUNC09G10740 I
ORGLA03G0094200 Oryza glaberrima ORGLA03G0094200 I
ORGLA08G0153600 Oryza glaberrima ORGLA08G0153600 I
ORGLA09G0092400 Oryza glaberrima ORGLA09G0092400 I
ORGLA09G0169200 Oryza glaberrima ORGLA09G0169200 I
ORUFI03G10000 Oryza rufipogon ORUFI03G10000 I
ORUFI09G13180 Oryza rufipogon ORUFI09G13180 I
OS03G0237250 Oryza sativa OS03G0237250 I
OS08G0467100 Oryza sativa OS08G0467100 I
Pavir.Ba02057 Panicum virgatum Pavir.Ba02057 I
Pavir.Fa00691 Panicum virgatum Pavir.Fa00691 I
Pavir.Fb01741 Panicum virgatum Pavir.Fb01741 I
Pavir.J12350 Panicum virgatum Pavir.J12350 I
Pavir.J40191 Panicum virgatum Pavir.J40191 I
PK17145.1 Cannabis sativa PK17145.1 I
Pm005926 Prunus mume Pm005926 I
PRUPE_ppa005331mg Prunus persica PRUPE_ppa005331mg I
SapurV1A.0074s0350 Salix purpurea SapurV1A.0074s0350 I
Sb02g026230 Sorghum bicolor Sb02g026230 I
Sb07g022700 Sorghum bicolor Sb07g022700 I
Si029726m.g Setaria italica Si029726m.g I
Thhalv10004221m.g Eutrema salsugineum Thhalv10004221m.g I
Thhalv10009376m.g Eutrema salsugineum Thhalv10009376m.g I
Thhalv10018614m.g Eutrema salsugineum Thhalv10018614m.g I
Traes_4AS_2718699A7 Triticum aestivum Traes_4AS_2718699A7 I