CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCF12
(
Microcebus murinus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMICG00000009110
T035262_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcf12
M01740_2.00
Mus musculus
NVCAYCTGB
VCAGRTGBN
PBM
Weirauch et al.(2014)
pTH5071
0.914
1.000
TCF12
M04137_2.00
Homo sapiens
VCACSTGB
VCASGTGB
SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX
0.914
1.000
Tcf12
M08062_2.00
Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0521.1
0.914
1.000
TCF12
M07805_2.00
Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN
ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha
0.914
1.000
TCF12
M07806_2.00
Homo sapiens
VCASCTGB
VCAGSTGB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha
0.914
1.000
TCF12
M08731_2.00
Homo sapiens
CMCASCTGSH
DSCAGSTGKG
Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A
0.914
1.000
Tcf12
M08762_2.00
Mus musculus
VMCASCTGSH
DSCAGSTGKB
Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A
0.914
1.000
TCF12
M09458_2.00
Homo sapiens
NNVCAGCTGB
VCAGCTGBNN
Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465
0.914
1.000
TCF12
M09858_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEB_Q6
0.914
1.000
TCF12
M09859_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HTF4_Q2
0.914
1.000
TCF12
M09860_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_01
0.914
1.000
TCF12
M09861_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_03
0.914
1.000
TCF12
M09862_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_05
0.914
1.000
TCF12
M04138_2.00
Homo sapiens
NCAYCTGN
NCAGRTGN
SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX
0.914
1.000
Tcf3
M00753_2.00
Mus musculus
VCACCTGBN
NVCAGGTGB
PBM
Weirauch et al.(2013)
pTH3866
0.914
0.885
Tcf3
M01723_2.00
Mus musculus
NNVCACSTGB
VCASGTGBNN
PBM
Weirauch et al.(2014)
pTH4580
0.914
0.885
Tcf3
M00118_2.00
Mus musculus
VCAYCTGB
VCAGRTGB
PBM
Badis et al.(2009)
Tcfe2a_3865
0.914
0.885
Tcf4
M01750_2.00
Mus musculus
VCAGVTGBN
NVCABCTGB
PBM
Weirauch et al.(2014)
pTH5101
0.912
0.962
TCF4
M02807_2.00
Homo sapiens
HRCACCTGBN
NVCAGGTGYD
SELEX
Jolma et al.(2013)
TCF4_1
0.912
0.962
TCF4
M02808_2.00
Homo sapiens
NVCACCTBBN
NVVAGGTGBN
SELEX
Jolma et al.(2013)
TCF4_2
0.912
0.962
TCF4
M02728_2.00
Homo sapiens
RCACCTG
CAGGTGY
SELEX
Jolma et al.(2010)
TCF4_dimer
0.912
0.962
TCF4
M04214_2.00
Homo sapiens
VCACCTGB
VCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX
0.912
0.962
Tcf4
M08775_2.00
Mus musculus
HRCACCTGB
VCAGGTGYD
Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B
0.912
0.962
TCF4
M09461_2.00
Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST
Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054
0.912
0.962
TCF4
M04215_2.00
Homo sapiens
VCACCTGN
NCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX
0.912
0.962
Tcf3
M09465_2.00
Mus musculus
ABWTCAAAGS
SCTTTGAWVT
Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724
0.886
0.962
Tcf3
M09466_2.00
Mus musculus
VCAGCTGBNN
NNVCAGCTGB
Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978
0.886
0.962
Tcf3
M09886_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E47_05
0.886
0.962
TCF3
M02775_2.00
Homo sapiens
NVCACCTGBN
NVCAGGTGBN
SELEX
Jolma et al.(2013)
TCF3_1
0.886
0.923
TCF3
M08710_2.00
Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB
Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A
0.886
0.923
TCF3
M09791_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E12_Q6
0.886
0.923
TCF3
M09792_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_01
0.886
0.923
TCF3
M09793_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_02
0.886
0.923
TCF3
M09794_2.00
Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB
Transfac
Matys et al.(2006)
V$E47_01
0.886
0.923
TCF3
M09795_2.00
Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN
Transfac
Matys et al.(2006)
V$E47_02
0.886
0.923
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000008303
bHLH
597
650
RRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLE
Links
Other
bHLH
family TFs
Other
Microcebus murinus
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000006403
Ailuropoda melanoleuca
ENSAMEG00000006403
I
Alligator_sinensis_CCG003669.1
Alligator sinensis
Alligator_sinensis_CCG003669.1
I
Alligator_sinensis_CCG019865.1
Alligator sinensis
Alligator_sinensis_CCG019865.1
I
ENSAPLG00000012971
Anas platyrhynchos
ENSAPLG00000012971
I
ENSACAG00000012356
Anolis carolinensis
ENSACAG00000012356
I
Afo_R011755
Aptenodytes forsteri
Afo_R011755
I
ENSAMXG00000003461
Astyanax mexicanus
ENSAMXG00000003461
I
ENSAMXG00000012874
Astyanax mexicanus
ENSAMXG00000012874
I
KLF15
Bos taurus
ENSBTAG00000008313
I
gw.37.333.1
Branchiostoma floridae
gw.37.333.1
I
gw.442.76.1
Branchiostoma floridae
gw.442.76.1
I
Brh_R002160
Buceros rhinoceros
Brh_R002160
I
KLF15
Callithrix jacchus
ENSCJAG00000006941
I
Aan_R004458
Calypte anna
Aan_R004458
I
KLF15
Canis familiaris
ENSCAFG00000003807
I
KLF15
Cavia porcellus
ENSCPOG00000005315
I
Cmyd_10010595
Chelonia mydas
Cmyd_10010595
I
Cmyd_10013831
Chelonia mydas
Cmyd_10013831
I
ENSCSAG00000008037
Chlorocebus sabaeus
ENSCSAG00000008037
I
CGI_10020309
Crassostrea gigas
CGI_10020309
I
si:ch211-117k10.3
Danio rerio
ENSDARG00000090914
I
klf15
Danio rerio
ENSDARG00000091127
I
KLF15
Dasypus novemcinctus
ENSDNOG00000036157
I
ENSDORG00000016283
Dipodomys ordii
ENSDORG00000016283
I
cbt
Drosophila ananassae
FBgn0101744
I
cbt
Drosophila erecta
FBgn0116778
I
cbt
Drosophila grimshawi
FBgn0117994
I
cbt
Drosophila melanogaster
FBgn0043364
D
cbt
Drosophila mojavensis
FBgn0140770
I
cbt
Drosophila persimilis
FBgn0156858
I
cbt
Drosophila pseudoobscura
FBgn0078183
I
cbt
Drosophila sechellia
FBgn0171577
I
cbt
Drosophila simulans
FBgn0194348
I
cbt
Drosophila virilis
FBgn0206865
I
cbt
Drosophila willistoni
FBgn0226609
I
cbt
Drosophila yakuba
FBgn0233632
I
KLF15
Equus caballus
ENSECAG00000021092
I
ENSFALG00000012601
Ficedula albicollis
ENSFALG00000012601
I
ENSGMOG00000000921
Gadus morhua
ENSGMOG00000000921
I
ENSGMOG00000003751
Gadus morhua
ENSGMOG00000003751
I
ENSGALG00000006245
Gallus gallus
ENSGALG00000006245
I
ENSGALG00000021702
Gallus gallus
ENSGALG00000021702
I
klf15
Gasterosteus aculeatus
ENSGACG00000003717
I
KLF15
Gasterosteus aculeatus
ENSGACG00000011317
I
Gfo_R014652
Geospiza fortis
Gfo_R014652
I
KLF15
Gorilla gorilla
ENSGGOG00000009916
I
KLF15
Homo sapiens
ENSG00000163884
D
XP_002161066.1
Hydra magnipapillata
XP_002161066.1
I
HmN_000574300
Hymenolepis microstoma
HmN_000574300
N
ENSLACG00000009512
Latimeria chalumnae
ENSLACG00000009512
I
ENSLACG00000013240
Latimeria chalumnae
ENSLACG00000013240
I
ENSLOCG00000011807
Lepisosteus oculatus
ENSLOCG00000011807
I
ENSLOCG00000013716
Lepisosteus oculatus
ENSLOCG00000013716
I
LDEC011944
Leptinotarsa decemlineata
LDEC011944
N
LDEC016289
Leptinotarsa decemlineata
LDEC016289
I
LotgiG100140
Lottia gigantea
LotgiG100140
I
KLF15
Loxodonta africana
ENSLAFG00000011970
I
ENSP00000296233
Macaca fascicularis
ENSP00000296233
I
KLF15
Macaca mulatta
ENSMMUG00000003721
I
ENSMGAG00000003006
Meleagris gallopavo
ENSMGAG00000003006
I
KLF15
Meleagris gallopavo
ENSMGAG00000007616
I
ENSMPUG00000017390
Mustela putorius furo
ENSMPUG00000017390
I
Klf15
Mus musculus
ENSMUSG00000030087
D
KLF15
Myotis lucifugus
ENSMLUG00000010178
I
ENSNLEG00000001047
Nomascus leucogenys
ENSNLEG00000001047
I
KLF15
Ochotona princeps
ENSOPRG00000005237
I
Ocbimv22012776m.g
Octopus bimaculoides
Ocbimv22012776m.g
I
Ogr01993
Ophisaurus gracilis
Ogr01993
I
Ogr18174
Ophisaurus gracilis
Ogr18174
I
ENSONIG00000003215
Oreochromis niloticus
ENSONIG00000003215
I
ENSONIG00000009164
Oreochromis niloticus
ENSONIG00000009164
I
KLF15
Ornithorhynchus anatinus
ENSOANG00000014825
I
KLF15
Oryctolagus cuniculus
ENSOCUG00000012493
I
klf15
Oryzias latipes
ENSORLG00000001165
I
si:ch211-117k10.3
Oryzias latipes
ENSORLG00000012237
I
KLF15
Otolemur garnettii
ENSOGAG00000000703
I
KLF15
Pan troglodytes
ENSPTRG00000015329
I
ENSPANG00000026096
Papio anubis
ENSPANG00000026096
I
ENSPFOG00000002472
Poecilia formosa
ENSPFOG00000002472
I
ENSPFOG00000003698
Poecilia formosa
ENSPFOG00000003698
I
ENSPFOG00000012815
Poecilia formosa
ENSPFOG00000012815
I
Pvit_06090
Pogona vitticeps
Pvit_06090
I
Pvit_11468
Pogona vitticeps
Pvit_11468
I
ENSPPYG00000013455
Pongo abelii
ENSPPYG00000013455
I
KLF15
Procavia capensis
ENSPCAG00000006301
I
KLF15
Pteropus vampyrus
ENSPVAG00000004109
I
Klf15
Rattus norvegicus
ENSRNOG00000017808
I
Sakowv30044439m.g
Saccoglossus kowalevskii
Sakowv30044439m.g
I
ENSSHAG00000007635
Sarcophilus harrisii
ENSSHAG00000007635
I
SMU15001129
Schmidtea mediterranea
SMU15001129
I
SPU_015772
Strongylocentrotus purpuratus
SPU_015772
I
si:ch211-117k10.3
Takifugu rubripes
ENSTRUG00000000076
I
KLF15
Takifugu rubripes
ENSTRUG00000006529
I
klf15
Takifugu rubripes
ENSTRUG00000014976
I
si:ch211-117k10.3
Tetraodon nigroviridis
ENSTNIG00000007382
I
KLF15
Tursiops truncatus
ENSTTRG00000008498
I
Tal_R002960
Tyto alba
Tal_R002960
I
Tal_R006156
Tyto alba
Tal_R006156
I
klf15.S
Xenopus laevis
XB-GENE-854150
I
klf15.2
Xenopus tropicalis
XB-GENE-1018580
I
klf15
Xenopus tropicalis
XB-GENE-854149
I
ENSXMAG00000001323
Xiphophorus maculatus
ENSXMAG00000001323
I
ENSXMAG00000007908
Xiphophorus maculatus
ENSXMAG00000007908
I
ENSXMAG00000013094
Xiphophorus maculatus
ENSXMAG00000013094
I
L798_11927
Zootermopsis nevadensis
L798_11927
I