CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOARG00000003162
(
Ovis aries
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSOARG00000003162
T035930_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Usf1
M01732_2.00
Mus musculus
NRYCACGTGNN
NNCACGTGRYN
PBM
Weirauch et al.(2014)
pTH4376
0.914
0.944
USF1
M02792_2.00
Homo sapiens
RNCACGTGRY
RYCACGTGNY
SELEX
Jolma et al.(2013)
USF1_1
0.914
0.944
USF1
M04146_2.00
Homo sapiens
NVCACGTGVCN
NGBCACGTGBN
SELEX
Yin et al.(2017)
USF1_FL_HT-SELEX
0.914
0.944
USF1
M08056_2.00
Homo sapiens
RGTCACRTGVB
VBCAYGTGACY
ChIP-seq
Mathelier et al.(2014)
MA0093.2
0.914
0.944
USF1
M07807_2.00
Homo sapiens
VGTCACGTGRBSVVV
BBBSVYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
A549_USF1_HudsonAlpha
0.914
0.944
USF1
M07808_2.00
Homo sapiens
VVGTCACGTGVBSVS
SBSVBCACGTGACBB
ChIP-seq
Gerstein et al.(2012)
GM12878_USF1_HudsonAlpha
0.914
0.944
USF1
M07809_2.00
Homo sapiens
RGTCACGTGVBSVNN
NNBSVBCACGTGACY
ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF1_HudsonAlpha
0.914
0.944
USF1
M07810_2.00
Homo sapiens
VGTCACGTGRB
VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
HepG2_USF1_HudsonAlpha
0.914
0.944
USF1
M07811_2.00
Homo sapiens
NVGTCACGTGVSSV
BSSBCACGTGACBN
ChIP-seq
Gerstein et al.(2012)
K562_USF1_HudsonAlpha
0.914
0.944
USF1
M08733_2.00
Homo sapiens
VGTCACGTGVBS
SVBCACGTGACB
Misc
Kulakovskiy et al.(2013)
USF1_HUMAN.H11MO.0.A
0.914
0.944
Usf1
M08756_2.00
Mus musculus
NNGTCACGTGVBS
SVBCACGTGACNN
Misc
Kulakovskiy et al.(2013)
USF1_MOUSE.H11MO.0.A
0.914
0.944
USF1
M09460_2.00
Homo sapiens
YCACGTGRBN
NVYCACGTGR
Misc
Heinz et al.(2010)
GM12878-Usf1_GSE32465
0.914
0.944
USF1
M09867_2.00
Homo sapiens
NNRYCACGTGRYNN
NNRYCACGTGRYNN
Transfac
Matys et al.(2006)
V$USF_01
0.914
0.944
USF1
M09868_2.00
Homo sapiens
NNRNCAYRTGNYNN
NNRNCAYRTGNYNN
Transfac
Matys et al.(2006)
V$USF_02
0.914
0.944
USF1
M09869_2.00
Homo sapiens
HCACGTGH
DCACGTGD
Transfac
Matys et al.(2006)
V$USF_C
0.914
0.944
USF1
M04147_2.00
Homo sapiens
VHCAYGTGAYN
NRTCACRTGDB
SELEX
Yin et al.(2017)
USF1_FL_Methyl-HT-SELEX
0.914
0.944
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOARP00000003367
bHLH
80
135
LRAQHNEVERRRRDKINNWIIQLSKIIPDCSMESTKSGQSKGGILAKACDYIQELR
Links
Other
bHLH
family TFs
Other
Ovis aries
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000015606
Ailuropoda melanoleuca
ENSAMEG00000015606
I
0.914
USF1
Bos taurus
ENSBTAG00000017873
I
0.914
USF1
Canis familiaris
ENSCAFG00000012689
I
0.914
USF1
Choloepus hoffmanni
ENSCHOG00000011010
I
0.914
USF1
Callithrix jacchus
ENSCJAG00000005396
I
0.914
USF1
Cavia porcellus
ENSCPOG00000003957
I
0.914
ENSCSAG00000002622
Chlorocebus sabaeus
ENSCSAG00000002622
I
0.914
ARHGAP30
Dasypus novemcinctus
ENSDNOG00000005811
I
0.914
USF1
Equus caballus
ENSECAG00000004755
I
0.914
USF1
Felis catus
ENSFCAG00000012307
I
0.914
USF1
Homo sapiens
ENSG00000158773
D
0.914
USF1
Gorilla gorilla
ENSGGOG00000003935
I
0.914
USF1
Loxodonta africana
ENSLAFG00000011338
I
0.914
ENSMEUG00000009683
Macropus eugenii
ENSMEUG00000009683
I
0.914
USF1
Microcebus murinus
ENSMICG00000007199
I
0.914
USF1
Myotis lucifugus
ENSMLUG00000009179
I
0.914
USF1
Macaca mulatta
ENSMMUG00000002003
I
0.914
USF1
Monodelphis domestica
ENSMODG00000005443
I
0.914
Usf1
Mus musculus
ENSMUSG00000026641
D
0.914
ENSNLEG00000013935
Nomascus leucogenys
ENSNLEG00000013935
I
0.914
ENSOARG00000009376
Ovis aries
ENSOARG00000009376
I
0.914
USF1
Oryctolagus cuniculus
ENSOCUG00000002352
I
0.914
ENSOGAG00000006705
Otolemur garnettii
ENSOGAG00000006705
I
0.914
USF1
Ochotona princeps
ENSOPRG00000003858
I
0.914
ENSPANG00000016141
Papio anubis
ENSPANG00000016141
I
0.914
ENSPPYG00000000619
Pongo abelii
ENSPPYG00000000619
I
0.914
ENSPSIG00000008116
Pelodiscus sinensis
ENSPSIG00000008116
I
0.914
USF1
Pan troglodytes
ENSPTRG00000001565
I
0.914
USF1
Pteropus vampyrus
ENSPVAG00000005489
I
0.914
Usf1
Rattus norvegicus
ENSRNOG00000004255
I
0.914
ENSSHAG00000016124
Sarcophilus harrisii
ENSSHAG00000016124
I
0.914
USF1
Sus scrofa
ENSSSCG00000006371
I
0.914
ENSSTOG00000012364
Ictidomys tridecemlineatus
ENSSTOG00000012364
I
0.914
USF1
Tupaia belangeri
ENSTBEG00000003164
I
0.914
USF1
Tursiops truncatus
ENSTTRG00000009151
I
0.914
USF1
Vicugna pacos
ENSVPAG00000008421
I
0.914
Alligator_sinensis_CCG013447.1
Alligator sinensis
Alligator_sinensis_CCG013447.1
I
0.914
ENSMMUP00000002682
Macaca fascicularis
ENSMMUP00000002682
I
0.914
ENSP00000357000-D1
Bos grunniens
ENSP00000357000-D1
I
0.914
Ogr08237
Ophisaurus gracilis
Ogr08237
I
0.914
Pvit_07548
Pogona vitticeps
Pvit_07548
I
0.914
B39674
Xenopus laevis
B39674
I
0.914
usf1
Xenopus tropicalis
XB-GENE-5918718
I
0.914
usf1.S
Xenopus laevis
XB-GENE-6255904
I
0.914
ENSMPUG00000014181
Mustela putorius furo
ENSMPUG00000014181
I
0.912
ENSONIG00000016360
Oreochromis niloticus
ENSONIG00000016360
I
0.874
ENSLACG00000001157
Latimeria chalumnae
ENSLACG00000001157
I
0.861
ENSLOCG00000000641
Lepisosteus oculatus
ENSLOCG00000000641
I
0.843
PHUM287950
Pediculus humanus
PHUM287950
I
0.839