TCF12 (Pan troglodytes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPTRG00000007109 T037018_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tcf12
M01740_2.00
Mus musculus
NVCAYCTGB

VCAGRTGBN
PBM
Weirauch et al.(2014)
pTH5071
0.914 1.000
TCF12
M04137_2.00
Homo sapiens
VCACSTGB

VCASGTGB
SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX
0.914 1.000
Tcf12
M08062_2.00
Mus musculus
RRCAGCTGNNN

NNNCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0521.1
0.914 1.000
TCF12
M07805_2.00
Homo sapiens
NVDSCAGSTGB

VCASCTGSHBN
ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha
0.914 1.000
TCF12
M07806_2.00
Homo sapiens
VCASCTGB

VCAGSTGB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha
0.914 1.000
TCF12
M08731_2.00
Homo sapiens
CMCASCTGSH

DSCAGSTGKG
Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A
0.914 1.000
Tcf12
M08762_2.00
Mus musculus
VMCASCTGSH

DSCAGSTGKB
Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A
0.914 1.000
TCF12
M09458_2.00
Homo sapiens
NNVCAGCTGB

VCAGCTGBNN
Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465
0.914 1.000
TCF12
M09858_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEB_Q6
0.914 1.000
TCF12
M09859_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HTF4_Q2
0.914 1.000
TCF12
M09860_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_01
0.914 1.000
TCF12
M09861_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_03
0.914 1.000
TCF12
M09862_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_05
0.914 1.000
TCF12
M04138_2.00
Homo sapiens
NCAYCTGN

NCAGRTGN
SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX
0.914 1.000
Tcf3
M00753_2.00
Mus musculus
VCACCTGBN

NVCAGGTGB
PBM
Weirauch et al.(2013)
pTH3866
0.914 0.885
Tcf3
M01723_2.00
Mus musculus
NNVCACSTGB

VCASGTGBNN
PBM
Weirauch et al.(2014)
pTH4580
0.914 0.885
Tcf3
M00118_2.00
Mus musculus
VCAYCTGB

VCAGRTGB
PBM
Badis et al.(2009)
Tcfe2a_3865
0.914 0.885
Tcf4
M01750_2.00
Mus musculus
VCAGVTGBN

NVCABCTGB
PBM
Weirauch et al.(2014)
pTH5101
0.912 0.962
TCF4
M02807_2.00
Homo sapiens
HRCACCTGBN

NVCAGGTGYD
SELEX
Jolma et al.(2013)
TCF4_1
0.912 0.962
TCF4
M02808_2.00
Homo sapiens
NVCACCTBBN

NVVAGGTGBN
SELEX
Jolma et al.(2013)
TCF4_2
0.912 0.962
TCF4
M02728_2.00
Homo sapiens
RCACCTG

CAGGTGY
SELEX
Jolma et al.(2010)
TCF4_dimer
0.912 0.962
TCF4
M04214_2.00
Homo sapiens
VCACCTGB

VCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX
0.912 0.962
Tcf4
M08775_2.00
Mus musculus
HRCACCTGB

VCAGGTGYD
Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B
0.912 0.962
TCF4
M09461_2.00
Homo sapiens
ASWTCAAAGRVN

NBYCTTTGAWST
Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054
0.912 0.962
TCF4
M04215_2.00
Homo sapiens
VCACCTGN

NCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX
0.912 0.962
Tcf3
M09465_2.00
Mus musculus
ABWTCAAAGS

SCTTTGAWVT
Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724
0.886 0.962
Tcf3
M09466_2.00
Mus musculus
VCAGCTGBNN

NNVCAGCTGB
Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978
0.886 0.962
Tcf3
M09886_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E47_05
0.886 0.962
TCF3
M02775_2.00
Homo sapiens
NVCACCTGBN

NVCAGGTGBN
SELEX
Jolma et al.(2013)
TCF3_1
0.886 0.923
TCF3
M08710_2.00
Homo sapiens
VVCASCTGCHN

NDGCAGSTGBB
Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A
0.886 0.923
TCF3
M09791_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E12_Q6
0.886 0.923
TCF3
M09792_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_01
0.886 0.923
TCF3
M09793_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_02
0.886 0.923
TCF3
M09794_2.00
Homo sapiens
VVVVMCACCTGCNBB

VVNGCAGGTGKBBBB
Transfac
Matys et al.(2006)
V$E47_01
0.886 0.923
TCF3
M09795_2.00
Homo sapiens
NNKWRCACCTGYDNNN

NNNHRCAGGTGYWMNN
Transfac
Matys et al.(2006)
V$E47_02
0.886 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000012156 bHLH 602 655

Links

Other bHLH family TFs
Other Pan troglodytes TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANIA_04562 Aspergillus nidulans CADANIAG00005876 D
AMAG_08133 Allomyces macrogynus AMAG_08133 I
AMAG_18789 Allomyces macrogynus AMAG_18789 I
CIMG_01816 Coccidioides immitis CIMG_01816 I
MCYG_03346 Microsporum canis MCYG_03346 I
RO3G_00882 Rhizopus oryzae RO3G_00882 I
RO3G_07291 Rhizopus oryzae RO3G_07291 I
RO3G_09518 Rhizopus oryzae RO3G_09518 I
RO3G_11752 Rhizopus oryzae RO3G_11752 I
RO3G_13320 Rhizopus oryzae RO3G_13320 I
SNOG_00166 Stagonospora nodorum SNOG_00166 I
A1O1_05481 Capronia coronata A1O1_05481 I
A1O5_02846 Cladophialophora psammophila A1O5_02846 I
A1O7_06866 Cladophialophora yegresii A1O7_06866 I
A1O9_01300 Exophiala aquamarina A1O9_01300 I
AOL_s00079g257 Arthrobotrys oligospora AOL_s00079g257 I
ARB_03451 Arthroderma benhamiae ARB_03451 I
BAUCODRAFT_23289 Baudoinia compniacensis BAUCODRAFT_23289 I
CADAFLAG00007235 Aspergillus flavus CADAFLAG00007235 I
AFUA_2G02540 Aspergillus fumigatus CADAFUAG00003598 I
CADANGAG00005877 Aspergillus niger CADANGAG00005877 I
ATEG_06925 Aspergillus terreus CADATEAG00003197 I
CANTEDRAFT_114901 Candida tenuis CANTEDRAFT_114901 I
CFIO01_10839 Colletotrichum fioriniae CFIO01_10839 I
CH063_04138 Colletotrichum higginsianum CH063_04138 I
CHGG_06554 Chaetomium globosum CHGG_06554 I
CMQ_4918 Grosmannia clavigera CMQ_4918 I
Cob_04988 Colletotrichum orbiculare Cob_04988 I
COCC4DRAFT_125759 Bipolaris maydis COCC4DRAFT_125759 I
COCCADRAFT_29461 Bipolaris zeicola COCCADRAFT_29461 I
COCMIDRAFT_108054 Bipolaris oryzae COCMIDRAFT_108054 I
COCSADRAFT_86485 Bipolaris sorokiniana COCSADRAFT_86485 I
COCVIDRAFT_20419 Bipolaris victoriae COCVIDRAFT_20419 I
COCVIDRAFT_30018 Bipolaris victoriae COCVIDRAFT_30018 I
CORT_0E05690 Candida orthopsilosis CORT_0E05690 I
CPC735_046790 Coccidioides posadasii CPC735_046790 I
CSUB01_03547 Colletotrichum sublineola CSUB01_03547 I
DOTSEDRAFT_48303 Dothistroma septosporum DOTSEDRAFT_48303 I
EPUS_07397 Endocarpon pusillum EPUS_07397 I
EURHEDRAFT_409443 Aspergillus ruber EURHEDRAFT_409443 I
G647_03229 Cladophialophora carrionii G647_03229 I
GLOINDRAFT_44500 Rhizophagus irregularis GLOINDRAFT_44500 I
GLRG_02502 Colletotrichum graminicola GLRG_02502 I
GMDG_07872 Pseudogymnoascus destructans GMDG_07872 I
GSTUM_00002563001 Tuber melanosporum GSTUM_00002563001 I
H101_05542 Trichophyton interdigitale H101_05542 I
H102_08445 Trichophyton rubrum H102_08445 I
HMPREF1541_10554 Cyphellophora europaea HMPREF1541_10554 I
HMPREF1624_04787 Sporothrix schenckii HMPREF1624_04787 I
LEMA_P113690.1 Leptosphaeria maculans LEMA_P113690.1 I
M7I_2756 Glarea lozoyensis M7I_2756 I
MAPG_10727 Magnaporthe poae MAPG_10727 I
MCYG_03346 Arthroderma otae MCYG_03346 I
MGYG_00508 Microsporum gypseum MGYG_00508 I
MYCFIDRAFT_49331 Pseudocercospora fijiensis MYCFIDRAFT_49331 I
Mycgr3G51498 Zymoseptoria tritici Mycgr3G51498 I
MYCTH_2298160 Myceliophthora thermophila MYCTH_2298160 I
OCS_00262 Ophiocordyceps sinensis OCS_00262 I
OIDMADRAFT_110220 Oidiodendron maius OIDMADRAFT_110220 I
PAAG_05122 Paracoccidioides sp lutzii PAAG_05122 I
PABG_04569 Paracoccidioides brasiliensis PABG_04569 I
PDE_05394 Penicillium oxalicum PDE_05394 I
PITC_036100 Penicillium italicum PITC_036100 I
PTRG_07150 Pyrenophora triticirepentis PTRG_07150 I
PTT_08596 Pyrenophora teres PTT_08596 I
PV04_07297 Capronia semiimmersa PV04_07297 I
PV05_09803 Exophiala xenobiotica PV05_09803 I
PV06_05518 Exophiala oligosperma PV06_05518 I
PV07_10932 Cladophialophora immunda PV07_10932 I
PV08_01459 Exophiala spinifera PV08_01459 I
PV10_06310 Exophiala mesophila PV10_06310 I
PV11_09617 Exophiala sideris PV11_09617 I
PVAR5_0698 Byssochlamys spectabilis PVAR5_0698 I
S40285_07743 Stachybotrys chlorohalonata S40285_07743 I
S40288_03446 Stachybotrys chartarum S40288_03446 I
SBOR_5107 Sclerotinia borealis SBOR_5107 I
SETTUDRAFT_111603 Setosphaeria turcica SETTUDRAFT_111603 I
SNOG_00166 Phaeosphaeria nodorum SNOG_00166 I
TEQG_00858 Trichophyton equinum TEQG_00858 I
TESG_06189 Trichophyton tonsurans TESG_06189 I
TRV_06106 Trichophyton verrucosum TRV_06106 I
UCRNP2_115 Neofusicoccum parvum UCRNP2_115 I
UREG_05510 Uncinocarpus reesii UREG_05510 I
V499_08520 Pseudogymnoascus pannorum V499_08520 I
Z517_09948 Fonsecaea pedrosoi Z517_09948 I
Z518_09068 Rhinocladiella mackenziei Z518_09068 I
Z519_07376 Cladophialophora bantiana Z519_07376 I
e_gw1.13.356.1 Mycosphaerella graminicola e_gw1.13.356.1 I
estExt_Genewise1.C_20182 Mycosphaerella fijiensis estExt_Genewise1.C_20182 I
estExt_Genewise1Plus.C_40021 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_40021 I
fgeneshMC_pg.2_#_504 Mucor circinelloides fgeneshMC_pg.2_#_504 I
fgeneshMC_pg.5_#_704 Mucor circinelloides fgeneshMC_pg.5_#_704 I
gw1.2.958.1 Phycomyces blakesleeanus gw1.2.958.1 I
gw1.4.1798.1 Mucor circinelloides gw1.4.1798.1 I
gw1.8.779.1 Mucor circinelloides gw1.8.779.1 I
AB08968.1 Alternaria brassicicola AB08968.1 I
e_gw1.00771.352.1 Aspergillus carbonarius e_gw1.00771.352.1 I
RO3G_08687 Rhizopus oryzae RO3G_08687 N
e_gw1.6.308.1 Phycomyces blakesleeanus e_gw1.6.308.1 N
e_gw1.9.210.1 Phycomyces blakesleeanus e_gw1.9.210.1 N
fgeneshMC_pg.8_#_258 Mucor circinelloides fgeneshMC_pg.8_#_258 N
gw1.26.112.1 Phycomyces blakesleeanus gw1.26.112.1 N