CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TWIST2
(
Sus scrofa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSSSCG00000016343
T037442_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Twist2
M01718_2.00
Mus musculus
NACATATGKN
NMCATATGTN
PBM
Weirauch et al.(2014)
pTH5033
0.914
1.000
TWIST1
M08052_2.00
Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN
ChIP-seq
Mathelier et al.(2014)
MA1123.1
0.914
0.962
TWIST1
M08722_2.00
Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW
Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A
0.914
0.962
Twist1
M08766_2.00
Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW
Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B
0.914
0.962
TWIST1
M09831_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6_01
0.914
0.962
TWIST1
M09832_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6
0.914
0.962
twi
M03605_2.00
Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK
SELEX
Nitta et al.(2015)
twi_1
0.859
0.827
twi
M03606_2.00
Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK
SELEX
Nitta et al.(2015)
twi_2
0.859
0.827
twi
M05955_2.00
Drosophila melanogaster
VCCAGATGTB
VACATCTGGB
B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900
0.859
0.827
twi
M05956_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900
0.859
0.827
twi
M07538_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
DNaseI footprinting
Mathelier et al.(2014)
MA0249.1
0.859
0.827
twi
M09657_2.00
Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT
Misc
Kulakovskiy et al.(2009)
twi
0.859
0.827
twi
M09892_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TWI_Q6
0.859
0.827
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000017317
bHLH
67
118
QRILANVRERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLY
Links
Other
bHLH
family TFs
Other
Sus scrofa
TFs
236 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000008896
Ailuropoda melanoleuca
ENSAMEG00000008896
N
ENSCAFG00000031771
Canis familiaris
ENSCAFG00000031771
N
ENSCSAG00000013677
Chlorocebus sabaeus
ENSCSAG00000013677
N
THAP10
Homo sapiens
ENSG00000129028
N
THAP10
Gorilla gorilla
ENSGGOG00000013943
N
ENSMEUG00000004169
Macropus eugenii
ENSMEUG00000004169
N
ENSMICG00000011238
Microcebus murinus
ENSMICG00000011238
N
THAP10
Macaca mulatta
ENSMMUG00000015085
N
THAP10
Monodelphis domestica
ENSMODG00000009022
N
ENSMPUG00000017085
Mustela putorius furo
ENSMPUG00000017085
N
ENSNLEG00000013697
Nomascus leucogenys
ENSNLEG00000013697
N
ENSP00000249861
Macaca fascicularis
ENSP00000249861
N
ENSPANG00000016336
Papio anubis
ENSPANG00000016336
N
ENSPPYG00000006605
Pongo abelii
ENSPPYG00000006605
N
THAP10
Pan troglodytes
ENSPTRG00000007235
N
ENSSHAG00000018533
Sarcophilus harrisii
ENSSHAG00000018533
N
ENSTSYG00000000900
Tarsius syrichta
ENSTSYG00000000900
N