CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000013876
(
Ictidomys tridecemlineatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSSTOG00000013876
T037508_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Arnt
M01719_2.00
Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN
PBM
Weirauch et al.(2014)
pTH5111
0.914
1.000
ARNT
M08732_2.00
Homo sapiens
NKRCGTGMN
NKCACGYMN
Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B
0.914
1.000
ARNT
M09459_2.00
Homo sapiens
KCACGTNN
NNACGTGM
Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937
0.914
1.000
ARNT
M09863_2.00
Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN
Transfac
Matys et al.(2006)
V$ARNT_01
0.914
1.000
ARNT
M09864_2.00
Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB
Transfac
Matys et al.(2006)
V$ARNT_02
0.914
1.000
ARNT
M09865_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6_01
0.914
1.000
ARNT
M09866_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6
0.914
1.000
tgo
M06005_2.00
Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY
B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014
0.914
0.926
tgo
M06006_2.00
Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS
B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014
0.914
0.926
tgo
M06007_2.00
Drosophila melanogaster
KCACGTGAC
GTCACGTGM
B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014
0.914
0.926
tgo
M06008_2.00
Drosophila melanogaster
RTACGTGAC
GTCACGTAY
B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014
0.914
0.926
tgo
M06009_2.00
Drosophila melanogaster
VWACGTGACY
RGTCACGTWB
B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014
0.914
0.926
tgo
M06010_2.00
Drosophila melanogaster
TGCGTGAC
GTCACGCA
B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014
0.914
0.926
tgo
M06011_2.00
Drosophila melanogaster
RCACGTGAC
GTCACGTGY
B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014
0.914
0.926
tgo
M06012_2.00
Drosophila melanogaster
VTACGTGACB
VGTCACGTAB
B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014
0.914
0.926
Arnt2
M01720_2.00
Mus musculus
NCAYRTGMNN
NNKCAYRTGN
PBM
Weirauch et al.(2014)
pTH5159
0.862
0.944
ARNT2
M04170_2.00
Homo sapiens
RDCACGTGMN
NKCACGTGHY
SELEX
Yin et al.(2017)
ARNT2_eDBD_HT-SELEX
0.862
0.944
Arnt2
M09888_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT2_01
0.862
0.944
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000012440
bHLH
90
143
ARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLR
Links
Other
bHLH
family TFs
Other
Ictidomys tridecemlineatus
TFs
199 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG104073
Fusarium solani
NechaG104073
N
estExt_fgenesh1_pm.C_sca_3_chr4_2_00260
Nectria haematococca
estExt_fgenesh1_pm.C_sca_3_chr4_2_00260
N
estExt_fgenesh1_pg.C_70076
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_70076
N
X797_004187
Metarhizium robertsii
X797_004187
N
VHEMI02651
Torrubiella hemipterigena
VHEMI02651
N
UCRPA7_4034
Togninia minima
UCRPA7_4034
N
SPBR_07677
Sporothrix brasiliensis
SPBR_07677
N
PODANS_1_17820
Podospora anserina
PODANS_1_17820
N
PDE_09174
Penicillium oxalicum
PDE_09174
N
CPUR_08422
Claviceps purpurea
CPUR_08422
N
MYCFIDRAFT_87337
Pseudocercospora fijiensis
MYCFIDRAFT_87337
N
MGU_03000
Metarhizium guizhouense
MGU_03000
N
MBR_03195
Metarhizium brunneum
MBR_03195
N
MANI_001839
Metarhizium anisopliae
MANI_001839
N
LEMA_P026490.1
Leptosphaeria maculans
LEMA_P026490.1
N
HMPREF1624_07649
Sporothrix schenckii
HMPREF1624_07649
N
GLOINDRAFT_11716
Rhizophagus irregularis
GLOINDRAFT_11716
N
DOTSEDRAFT_71721
Dothistroma septosporum
DOTSEDRAFT_71721
N