CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ARNT2
(
Tupaia belangeri
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTBEG00000015444
T037602_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Arnt2
M01720_2.00
Mus musculus
NCAYRTGMNN
NNKCAYRTGN
PBM
Weirauch et al.(2014)
pTH5159
0.914
1.000
ARNT2
M04170_2.00
Homo sapiens
RDCACGTGMN
NKCACGTGHY
SELEX
Yin et al.(2017)
ARNT2_eDBD_HT-SELEX
0.914
1.000
Arnt2
M09888_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT2_01
0.914
1.000
Arnt
M01719_2.00
Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN
PBM
Weirauch et al.(2014)
pTH5111
0.862
0.944
ARNT
M08732_2.00
Homo sapiens
NKRCGTGMN
NKCACGYMN
Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B
0.862
0.944
ARNT
M09459_2.00
Homo sapiens
KCACGTNN
NNACGTGM
Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937
0.862
0.944
ARNT
M09863_2.00
Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN
Transfac
Matys et al.(2006)
V$ARNT_01
0.862
0.944
ARNT
M09864_2.00
Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB
Transfac
Matys et al.(2006)
V$ARNT_02
0.862
0.944
ARNT
M09865_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6_01
0.862
0.944
ARNT
M09866_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARNT_Q6
0.862
0.944
tgo
M06005_2.00
Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY
B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06006_2.00
Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS
B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014
0.862
0.907
tgo
M06007_2.00
Drosophila melanogaster
KCACGTGAC
GTCACGTGM
B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06008_2.00
Drosophila melanogaster
RTACGTGAC
GTCACGTAY
B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06009_2.00
Drosophila melanogaster
VWACGTGACY
RGTCACGTWB
B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06010_2.00
Drosophila melanogaster
TGCGTGAC
GTCACGCA
B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06011_2.00
Drosophila melanogaster
RCACGTGAC
GTCACGTGY
B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014
0.862
0.907
tgo
M06012_2.00
Drosophila melanogaster
VTACGTGACB
VGTCACGTAB
B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014
0.862
0.907
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000013421
bHLH
49
102
SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMR
Links
Other
bHLH
family TFs
Other
Tupaia belangeri
TFs
175 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.8__1059__AT5G51780.1
Arabidopsis lyrata
fgenesh2_kg.8__1059__AT5G51780.1
I
AT5G51780
Arabidopsis thaliana
AT5G51780
I
AT4G25400
Arabidopsis thaliana
AT4G25400
D
Bostr.13671s0206
Boechera stricta
Bostr.13671s0206
I
Bostr.7867s0349
Boechera stricta
Bostr.7867s0349
I
Bostr.15774s0324
Boechera stricta
Bostr.15774s0324
I
Bo2g048240
Brassica oleracea
Bo2g048240
I
Bo7g110280
Brassica oleracea
Bo7g110280
I
Bra022562
Brassica rapa
Bra022562
I
Bra019167
Brassica rapa
Bra019167
I
PK15358.1
Cannabis sativa
PK15358.1
I
PK11667.1
Cannabis sativa
PK11667.1
I
Cagra.0277s0021
Capsella grandiflora
Cagra.0277s0021
I
Cagra.0568s0165
Capsella grandiflora
Cagra.0568s0165
N
Carubv10027166m.g
Capsella rubella
Carubv10027166m.g
I
Carubv10011792m.g
Capsella rubella
Carubv10011792m.g
N
evm.TU.supercontig_4.181
Carica papaya
evm.TU.supercontig_4.181
I
evm.TU.supercontig_4.179
Carica papaya
evm.TU.supercontig_4.179
N
Ca_22233
Cicer arietinum
Ca_22233
I
Ciclev10006639m.g
Citrus clementina
Ciclev10006639m.g
N
Ciclev10006628m.g
Citrus clementina
Ciclev10006628m.g
I
orange1.1g036406m.g
Citrus sinensis
orange1.1g036406m.g
I
Eucgr.F04119
Eucalyptus grandis
Eucgr.F04119
I
Thhalv10009922m.g
Eutrema salsugineum
Thhalv10009922m.g
I
Thhalv10015297m.g
Eutrema salsugineum
Thhalv10015297m.g
I
Thhalv10026341m.g
Eutrema salsugineum
Thhalv10026341m.g
I
gene32346-v1.0-hybrid
Fragaria vesca
gene32346-v1.0-hybrid
N
gene13365-v1.0-hybrid
Fragaria vesca
gene13365-v1.0-hybrid
N
GLYMA09G27610
Glycine max
GLYMA09G27610
I
GLYMA09G27630
Glycine max
GLYMA09G27630
N
GLYMA10G38630
Glycine max
GLYMA10G38630
N
GLYMA16G32610
Glycine max
GLYMA16G32610
I
GLYMA16G32620
Glycine max
GLYMA16G32620
N
GLYMA20G29120
Glycine max
GLYMA20G29120
N
Gorai.008G282300
Gossypium raimondii
Gorai.008G282300
I
Gorai.006G196500
Gossypium raimondii
Gorai.006G196500
I
Lus10027394.g
Linum usitatissimum
Lus10027394.g
N
LjSGA_023375.1
Lotus japonicus
LjSGA_023375.1
I
MDP0000246258
Malus domestica
MDP0000246258
I
cassava21379.m1
Manihot esculenta
cassava21379.m1
I
cassava45968.m1
Manihot esculenta
cassava45968.m1
I
MTR_0007s0380
Medicago truncatula
MTR_0007s0380
N
MTR_1g102370
Medicago truncatula
MTR_1g102370
N
MTR_0007s0330
Medicago truncatula
MTR_0007s0330
N
POPTR_0012s14080
Populus trichocarpa
POPTR_0012s14080
I
Pm019419
Prunus mume
Pm019419
I
30147.m014147
Ricinus communis
30147.m014147
N
SapurV1A.0881s0080
Salix purpurea
SapurV1A.0881s0080
N
Solyc06g035490.2
Solanum lycopersicum
Solyc06g035490.2
I
TCM_016133
Theobroma cacao
TCM_016133
I
TCM_016134
Theobroma cacao
TCM_016134
I