CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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bhlhe41
(
Takifugu rubripes
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTRUG00000005639
T037844_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bhlhe41
M01739_2.00
Mus musculus
NMNCGTGMN
NKCACGNKN
PBM
Weirauch et al.(2014)
pTH5060
0.889
0.944
BHLHE41
M02782_2.00
Homo sapiens
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB3_1
0.889
0.944
BHLHE41
M02783_2.00
Homo sapiens
RKCACGTGAY
RTCACGTGMY
SELEX
Jolma et al.(2013)
BHLHE41_1
0.889
0.944
BHLHE41
M04106_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX
0.889
0.944
BHLHE41
M09833_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q2
0.889
0.944
BHLHE41
M09834_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q3
0.889
0.944
BHLHE41
M04107_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX
0.889
0.944
Bhlhe40
M00119_2.00
Mus musculus
DCACGTGMN
NKCACGTGH
PBM
Badis et al.(2009)
Bhlhb2_1274
0.889
0.926
Bhlhe40
M01738_2.00
Mus musculus
NCACRNBN
NVNYGTGN
PBM
Weirauch et al.(2014)
pTH4330
0.889
0.926
BHLHE40
M02788_2.00
Homo sapiens
NKCACGTGMH
DKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB2_1
0.889
0.926
Bhlhe40
M02817_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_1
0.889
0.926
Bhlhe40
M02818_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_2
0.889
0.926
BHLHE40
M04126_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX
0.889
0.926
BHLHE40
M07798_2.00
Homo sapiens
DCACGTGMSN
NSKCACGTGH
ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha
0.889
0.926
BHLHE40
M08726_2.00
Homo sapiens
DDCACGTGMS
SKCACGTGHH
Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A
0.889
0.926
Bhlhe40
M08761_2.00
Mus musculus
DCACGTGMS
SKCACGTGH
Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A
0.889
0.926
BHLHE40
M09456_2.00
Homo sapiens
DCACGTGMNN
NNKCACGTGH
Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477
0.889
0.926
BHLHE40
M09842_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BHLHE40_03
0.889
0.926
BHLHE40
M09843_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q2
0.889
0.926
BHLHE40
M09844_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q3
0.889
0.926
BHLHE40
M09845_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STRA13_01
0.889
0.926
BHLHE40
M04127_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX
0.889
0.926
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000013624
bHLH
47
101
KLPHRLIEKKRRDRINECIGQLKDLLPEHLKLSTLGHLEKAVVLELTLKHLNALT
ENSTRUP00000013625
bHLH
47
101
KLPHRLIEKKRRDRINECIGQLKDLLPEHLKLSTLGHLEKAVVLELTLKHLNALT
Links
Other
bHLH
family TFs
Other
Takifugu rubripes
TFs
118 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAG_13812
Allomyces macrogynus
AMAG_13812
I
AMAG_13560
Allomyces macrogynus
AMAG_13560
I
M378DRAFT_52467
Amanita muscaria
M378DRAFT_52467
I
BATDEDRAFT_89666
Batrachochytrium dendrobatidis
BATDEDRAFT_89666
N
BOTBODRAFT_182611
Botryobasidium botryosum
BOTBODRAFT_182611
I
Bcin02g03320
Botrytis cinerea
Bcin02g03320
I
CERSUDRAFT_114103
Ceriporiopsis subvermispora
CERSUDRAFT_114103
I
CHGG_05974
Chaetomium globosum
CHGG_05974
I
CC1G_07415
Coprinopsis cinerea
CC1G_07415
I
estExt_Genewise1Plus.C_140165
Cryphonectria parasitica
estExt_Genewise1Plus.C_140165
I
DACRYDRAFT_48176
Dacryopinax sp
DACRYDRAFT_48176
I
FIBRA_08626
Fibroporia radiculosa
FIBRA_08626
I
FOMPIDRAFT_1123646
Fomitopsis pinicola
FOMPIDRAFT_1123646
I
GGTG_12878
Gaeumannomyces graminis
GGTG_12878
I
GALMADRAFT_123329
Galerina marginata
GALMADRAFT_123329
I
GLOTRDRAFT_21409
Gloeophyllum trabeum
GLOTRDRAFT_21409
I
CMQ_1414
Grosmannia clavigera
CMQ_1414
I
M413DRAFT_24434
Hebeloma cylindrosporum
M413DRAFT_24434
I
HETIRDRAFT_248206
Heterobasidion irregulare
HETIRDRAFT_248206
I
JAAARDRAFT_97747
Jaapia argillacea
JAAARDRAFT_97747
I
PAS_chr3_0766
Komagataella pastoris
PAS_chr3_0766
I
K443DRAFT_676702
Laccaria amethystina
K443DRAFT_676702
I
LELG_00868
Lodderomyces elongisporus
LELG_00868
I
MAPG_00591
Magnaporthe poae
MAPG_00591
I
EDP44549.1
Malassezia globosa
EDP44549.1
I
MSY001_2604
Malassezia sympodialis
MSY001_2604
I
MBM_02278
Marssonina brunnea
MBM_02278
I
MVLG_01455
Microbotryum violaceum
MVLG_01455
I
DI09_24p280
Microsporidia sp
DI09_24p280
N
Moror_8992
Moniliophthora roreri
Moror_8992
I
fgeneshMC_pg.11_#_166
Mucor circinelloides
fgeneshMC_pg.11_#_166
I
fgeneshMC_pg.10_#_374
Mucor circinelloides
fgeneshMC_pg.10_#_374
I
MYCTH_2297059
Myceliophthora thermophila
MYCTH_2297059
I
OIDMADRAFT_64370
Oidiodendron maius
OIDMADRAFT_64370
I
PAXRUDRAFT_147875
Paxillus rubicundulus
PAXRUDRAFT_147875
I
PFICI_01568
Pestalotiopsis fici
PFICI_01568
I
Phatr3_J39335
Phaeodactylum tricornutum
Phatr3_J39335
I
PHACADRAFT_54766
Phanerochaete carnosa
PHACADRAFT_54766
I
gwh2.6.574.1
Phanerochaete chrysosporium
gwh2.6.574.1
I
PHLGIDRAFT_43379
Phlebiopsis gigantea
PHLGIDRAFT_43379
I
fgeneshPB_pg.4__282
Phycomyces blakesleeanus
fgeneshPB_pg.4__282
I
estExt_fgeneshPB_pg.C_250119
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_250119
I
XP_002492996.1
Pichia pastoris
XP_002492996.1
I
PILCRDRAFT_824094
Piloderma croceum
PILCRDRAFT_824094
I
PIIN_00087
Piriformospora indica
PIIN_00087
I
PISMIDRAFT_40699
Pisolithus microcarpus
PISMIDRAFT_40699
I
M404DRAFT_68462
Pisolithus tinctorius
M404DRAFT_68462
I
PLEOSDRAFT_1027012
Pleurotus ostreatus
PLEOSDRAFT_1027012
I
POSPLDRAFT_42451
Postia placenta
POSPLDRAFT_42451
I
GMDG_04517
Pseudogymnoascus destructans
GMDG_04517
I
V499_07378
Pseudogymnoascus pannorum
V499_07378
I
PaG_02568
Pseudozyma aphidis
PaG_02568
N
PSEUBRA_SCAF2g02687
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02687
N
PFL1_05889
Pseudozyma flocculosa
PFL1_05889
I
PHSY_003968
Pseudozyma hubeiensis
PHSY_003968
N
V565_064680
Rhizoctonia solani
V565_064680
I
GLOINDRAFT_349601
Rhizophagus irregularis
GLOINDRAFT_349601
I
RO3G_00980
Rhizopus oryzae
RO3G_00980
I
RO3G_16178
Rhizopus oryzae
RO3G_16178
I
RHTO_00634
Rhodosporidium toruloides
RHTO_00634
I
RTG_01693
Rhodotorula glutinis
RTG_01693
I
SCHCODRAFT_110229
Schizophyllum commune
SCHCODRAFT_110229
I
SPOG_04316
Schizosaccharomyces cryophilus
SPOG_04316
I
SJAG_00698
Schizosaccharomyces japonicus
SJAG_00698
I
SOCG_03424
Schizosaccharomyces octosporus
SOCG_03424
I
php2
Schizosaccharomyces pombe
SPBC725.11c
I
SCLCIDRAFT_62922
Scleroderma citrinum
SCLCIDRAFT_62922
I
SS1G_01725
Sclerotinia sclerotiorum
SS1G_01725
I
SERLA73DRAFT_72938
Serpula lacrymans
SERLA73DRAFT_72938
I
sr12660
Sporisorium reilianum
sr12660
N
estExt_fgenesh1_pg.C_120063
Sporobolomyces roseus
estExt_fgenesh1_pg.C_120063
I
SPBR_07722
Sporothrix brasiliensis
SPBR_07722
I
HMPREF1624_07645
Sporothrix schenckii
HMPREF1624_07645
I
CY34DRAFT_54046
Suillus luteus
CY34DRAFT_54046
I
THITE_2112524
Thielavia terrestris
THITE_2112524
I
UCRPA7_4038
Togninia minima
UCRPA7_4038
I
BN946_scf184796.g4
Trametes cinnabarina
BN946_scf184796.g4
I
M407DRAFT_54328
Tulasnella calospora
M407DRAFT_54328
I
UHOR_02364
Ustilago hordei
UHOR_02364
N
UM01597
Ustilago maydis
UM01597
N