CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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myf5
(
Takifugu rubripes
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTRUG00000010781
T037874_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Myf6
M00120_2.00
Mus musculus
NCRNNTGNY
RNCANNYGN
PBM
Badis et al.(2009)
Myf6_3824
0.844
0.750
Myf6
M01742_2.00
Mus musculus
RACAGHTGH
DCADCTGTY
PBM
Weirauch et al.(2014)
pTH5099
0.844
0.750
MYF6
M02780_2.00
Homo sapiens
AACARCTGTY
RACAGYTGTT
SELEX
Jolma et al.(2013)
MYF6_1
0.844
0.750
MYF6
M04084_2.00
Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_1
0.844
0.750
MYF6
M04085_2.00
Homo sapiens
NRACASSTGWYV
BRWCASSTGTYN
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_2
0.844
0.750
MYF6
M05831_2.00
Homo sapiens
BRACAKNTGNY
RNCANMTGTYV
SMiLE-seq
Isakova et al.(2017)
MYF6
0.844
0.750
MYF6
M08717_2.00
Homo sapiens
CASCTGC
GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_HUMAN.H11MO.0.C
0.844
0.750
Myf6
M08767_2.00
Mus musculus
CASCTGC
GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_MOUSE.H11MO.0.C
0.844
0.750
MYF6
M09820_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MRF4_Q3
0.844
0.750
MYF6
M04086_2.00
Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_1
0.844
0.750
MYF6
M04087_2.00
Homo sapiens
BAACASSTGWYV
BRWCASSTGTTV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_2
0.844
0.750
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000027204
bHLH
68
119
RRRAATMRERRRLKKVNHAFDALRRCTSANSSQRLPKVEILRNAIQYIESLQ
Links
Other
bHLH
family TFs
Other
Takifugu rubripes
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
myf5
Tetraodon nigroviridis
ENSTNIG00000011406
I
0.914
ENSAMXG00000000428
Astyanax mexicanus
ENSAMXG00000000428
I
0.886
myf5
Danio rerio
ENSDARG00000007277
I
0.886
ENSONIG00000000077
Oreochromis niloticus
ENSONIG00000000077
I
0.886
myf5
Oryzias latipes
ENSORLG00000016257
I
0.886
ENSPFOG00000017488
Poecilia formosa
ENSPFOG00000017488
I
0.886
ENSXMAG00000017496
Xiphophorus maculatus
ENSXMAG00000017496
I
0.886
ENSAPLG00000001124
Anas platyrhynchos
ENSAPLG00000001124
I
0.866
ENSFALG00000010507
Ficedula albicollis
ENSFALG00000010507
I
0.866
MYF5
Gallus gallus
ENSGALG00000028091
I
0.866
ENSMEUG00000010628
Macropus eugenii
ENSMEUG00000010628
I
0.866
ENSMGAG00000011091
Meleagris gallopavo
ENSMGAG00000011091
I
0.866
MYF5
Monodelphis domestica
ENSMODG00000020478
I
0.866
MYF5
Ornithorhynchus anatinus
ENSOANG00000004853
I
0.866
MYF5
Otolemur garnettii
ENSOGAG00000001039
I
0.866
ENSPSIG00000012000
Pelodiscus sinensis
ENSPSIG00000012000
I
0.866
ENSSHAG00000013391
Sarcophilus harrisii
ENSSHAG00000013391
I
0.866
ENSTGUG00000007755
Taeniopygia guttata
ENSTGUG00000007755
I
0.866
Alligator_sinensis_CCG017419.1
Alligator sinensis
Alligator_sinensis_CCG017419.1
I
0.866
Brh_R000054
Buceros rhinoceros
Brh_R000054
I
0.866
MYF6
Anolis carolinensis
ENSACAG00000022851
I
0.844
ENSAMEG00000013207
Ailuropoda melanoleuca
ENSAMEG00000013207
I
0.844
ENSAPLG00000002254
Anas platyrhynchos
ENSAPLG00000002254
I
0.844
MYF6
Bos taurus
ENSBTAG00000014003
I
0.844
MYF6
Canis familiaris
ENSCAFG00000005805
I
0.844
MYF6
Callithrix jacchus
ENSCJAG00000019339
I
0.844
ENSCPOG00000007763
Cavia porcellus
ENSCPOG00000007763
I
0.844
ENSCSAG00000003893
Chlorocebus sabaeus
ENSCSAG00000003893
I
0.844
MYF6
Dasypus novemcinctus
ENSDNOG00000019387
I
0.844
MYF6
Equus caballus
ENSECAG00000018919
I
0.844
ENSFALG00000010503
Ficedula albicollis
ENSFALG00000010503
I
0.844
MYF6
Felis catus
ENSFCAG00000015010
I
0.844
MYF6
Homo sapiens
ENSG00000111046
D
0.844
myf6
Gasterosteus aculeatus
ENSGACG00000020008
I
0.844
MYF6
Gallus gallus
ENSGALG00000010936
I
0.844
MYF6
Gorilla gorilla
ENSGGOG00000004369
I
0.844
MYF6
Loxodonta africana
ENSLAFG00000016476
I
0.844
ENSMEUG00000010618
Macropus eugenii
ENSMEUG00000010618
I
0.844
MYF6
Microcebus murinus
ENSMICG00000004274
I
0.844
MYF6
Myotis lucifugus
ENSMLUG00000004940
I
0.844
MYF6
Macaca mulatta
ENSMMUG00000011667
I
0.844
MYF6
Monodelphis domestica
ENSMODG00000020477
I
0.844
ENSMPUG00000004945
Mustela putorius furo
ENSMPUG00000004945
I
0.844
Myf6
Mus musculus
ENSMUSG00000035923
D
0.844
ENSNLEG00000005194
Nomascus leucogenys
ENSNLEG00000005194
I
0.844
MYF6
Ornithorhynchus anatinus
ENSOANG00000004854
I
0.844
ENSOARG00000015145
Ovis aries
ENSOARG00000015145
I
0.844
MYF6
Oryctolagus cuniculus
ENSOCUG00000001457
I
0.844
MYF6
Otolemur garnettii
ENSOGAG00000001038
I
0.844
ENSONIG00000000007
Oreochromis niloticus
ENSONIG00000000007
I
0.844
myf6
Oryzias latipes
ENSORLG00000016261
I
0.844
ENSPANG00000007910
Papio anubis
ENSPANG00000007910
I
0.844
MYF6
Procavia capensis
ENSPCAG00000001692
I
0.844
ENSPFOG00000017498
Poecilia formosa
ENSPFOG00000017498
I
0.844
ENSPPYG00000004799
Pongo abelii
ENSPPYG00000004799
I
0.844
ENSPSIG00000012468
Pelodiscus sinensis
ENSPSIG00000012468
I
0.844
MYF6
Pan troglodytes
ENSPTRG00000005260
I
0.844
MYF6
Pteropus vampyrus
ENSPVAG00000003335
I
0.844
Myf6
Rattus norvegicus
ENSRNOG00000004878
I
0.844
MYF6
Sorex araneus
ENSSARG00000008211
I
0.844
ENSSHAG00000013331
Sarcophilus harrisii
ENSSHAG00000013331
I
0.844
MYF6
Sus scrofa
ENSSSCG00000026533
I
0.844
ENSSTOG00000015808
Ictidomys tridecemlineatus
ENSSTOG00000015808
I
0.844
MYF6
Taeniopygia guttata
ENSTGUG00000007751
I
0.844
myf6
Takifugu rubripes
ENSTRUG00000010842
I
0.844
ENSTSYG00000003275
Tarsius syrichta
ENSTSYG00000003275
I
0.844
MYF6
Tursiops truncatus
ENSTTRG00000014689
I
0.844
MYF6
Vicugna pacos
ENSVPAG00000001926
I
0.844
ENSXMAG00000017492
Xiphophorus maculatus
ENSXMAG00000017492
I
0.844
Aan_R006110
Calypte anna
Aan_R006110
I
0.844
Afo_R014067
Aptenodytes forsteri
Afo_R014067
I
0.844
Alligator_sinensis_CCG017418.1
Alligator sinensis
Alligator_sinensis_CCG017418.1
I
0.844
ENSP00000228641-D1
Bos grunniens
ENSP00000228641-D1
I
0.844
ENSP00000228641
Macaca fascicularis
ENSP00000228641
I
0.844
Gfo_R003967
Geospiza fortis
Gfo_R003967
I
0.844
Myotis_brandtii_MYF6_10034130
Myotis brandtii
Myotis_brandtii_MYF6_10034130
I
0.844
Pvit_10244
Pogona vitticeps
Pvit_10244
I
0.844
AAO11649
Xenopus laevis
AAO11649
I
0.844
ABU42126
Xenopus laevis
ABU42126
I
0.844
myf6.L
Xenopus laevis
XB-GENE-6252334
I
0.844
myf6
Xenopus tropicalis
XB-GENE-998203
I
0.844
myf6.S
Xenopus laevis
XB-GENE-998208
I
0.844
ENSAMXG00000017040
Astyanax mexicanus
ENSAMXG00000017040
I
0.842
myod1
Gasterosteus aculeatus
ENSGACG00000008444
I
0.842
myod1
Gasterosteus aculeatus
ENSGACG00000017350
I
0.842
ENSONIG00000010796
Oreochromis niloticus
ENSONIG00000010796
I
0.842
myod1
Oryzias latipes
ENSORLG00000000694
I
0.842
ENSPFOG00000013532
Poecilia formosa
ENSPFOG00000013532
I
0.842
myod1
Tetraodon nigroviridis
ENSTNIG00000002808
I
0.842
ENSXMAG00000007430
Xiphophorus maculatus
ENSXMAG00000007430
I
0.842
Sakowv30008488m.g
Saccoglossus kowalevskii
Sakowv30008488m.g
I
0.842
myf6
Tetraodon nigroviridis
ENSTNIG00000011407
I
0.841