CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
FERD3L
(
Takifugu rubripes
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTRUG00000014737
T037907_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FERD3L
M04140_2.00
Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1
0.852
0.923
FERD3L
M04141_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2
0.852
0.923
FERD3L
M04142_2.00
Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1
0.852
0.923
FERD3L
M04143_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2
0.852
0.923
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000037678
bHLH
87
139
QRQAANVRERKRMFSLNEAFDELRRKVPTFAYEKRLSRIDTLRLAIVYISFMT
Links
Other
bHLH
family TFs
Other
Takifugu rubripes
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FERD3L
Gasterosteus aculeatus
ENSGACG00000006421
I
0.914
FERD3L
Tetraodon nigroviridis
ENSTNIG00000017777
I
0.914
ENSACAG00000011821
Anolis carolinensis
ENSACAG00000011821
I
0.888
ENSAMXG00000025611
Astyanax mexicanus
ENSAMXG00000025611
I
0.888
ferd3l
Danio rerio
ENSDARG00000092160
I
0.888
ENSLOCG00000018351
Lepisosteus oculatus
ENSLOCG00000018351
I
0.888
FERD3L
Oryzias latipes
ENSORLG00000004008
I
0.888
ENSPFOG00000020055
Poecilia formosa
ENSPFOG00000020055
I
0.864
ENSXMAG00000020141
Xiphophorus maculatus
ENSXMAG00000020141
I
0.864
SMU15040320
Schmidtea mediterranea
SMU15040320
I
0.864
ENSAMEG00000019030
Ailuropoda melanoleuca
ENSAMEG00000019030
I
0.852
ENSAPLG00000001417
Anas platyrhynchos
ENSAPLG00000001417
I
0.852
FERD3L
Bos taurus
ENSBTAG00000039955
I
0.852
FERD3L
Canis familiaris
ENSCAFG00000002506
I
0.852
ENSCSAG00000019609
Chlorocebus sabaeus
ENSCSAG00000019609
I
0.852
FERD3L
Dasypus novemcinctus
ENSDNOG00000037813
I
0.852
Ferd3l
Dipodomys ordii
ENSDORG00000012867
I
0.852
FERD3L
Equus caballus
ENSECAG00000002518
I
0.852
FERD3L
Erinaceus europaeus
ENSEEUG00000004309
I
0.852
ENSFALG00000014487
Ficedula albicollis
ENSFALG00000014487
I
0.852
FERD3L
Felis catus
ENSFCAG00000010289
I
0.852
FERD3L
Homo sapiens
ENSG00000146618
D
0.852
FERD3L
Gallus gallus
ENSGALG00000010862
I
0.852
FERD3L
Gorilla gorilla
ENSGGOG00000021943
I
0.852
ENSLACG00000013215
Latimeria chalumnae
ENSLACG00000013215
I
0.852
FERD3L
Loxodonta africana
ENSLAFG00000012782
I
0.852
FERD3L
Meleagris gallopavo
ENSMGAG00000015843
I
0.852
ENSMICG00000010110
Microcebus murinus
ENSMICG00000010110
I
0.852
FERD3L
Myotis lucifugus
ENSMLUG00000006930
I
0.852
FERD3L
Macaca mulatta
ENSMMUG00000011174
I
0.852
Ferd3l
Mus musculus
ENSMUSG00000046518
I
0.852
ENSNLEG00000019265
Nomascus leucogenys
ENSNLEG00000019265
I
0.852
FERD3L
Ornithorhynchus anatinus
ENSOANG00000009615
I
0.852
ENSOARG00000008159
Ovis aries
ENSOARG00000008159
I
0.852
FERD3L
Oryctolagus cuniculus
ENSOCUG00000016121
I
0.852
FERD3L
Otolemur garnettii
ENSOGAG00000014773
I
0.852
FERD3L
Ochotona princeps
ENSOPRG00000004265
I
0.852
ENSPANG00000010936
Papio anubis
ENSPANG00000010936
I
0.852
FERD3L
Procavia capensis
ENSPCAG00000013680
I
0.852
ENSPPYG00000017753
Pongo abelii
ENSPPYG00000017753
I
0.852
ENSPSIG00000000691
Pelodiscus sinensis
ENSPSIG00000000691
I
0.852
FERD3L
Pan troglodytes
ENSPTRG00000018961
I
0.852
FERD3L
Pteropus vampyrus
ENSPVAG00000001711
I
0.852
Ferd3l
Rattus norvegicus
ENSRNOG00000011091
I
0.852
FERD3L
Sus scrofa
ENSSSCG00000015371
I
0.852
ENSSTOG00000025739
Ictidomys tridecemlineatus
ENSSTOG00000025739
I
0.852
FERD3L
Tupaia belangeri
ENSTBEG00000003400
I
0.852
FERD3L
Taeniopygia guttata
ENSTGUG00000002644
I
0.852
ENSTSYG00000010121
Tarsius syrichta
ENSTSYG00000010121
I
0.852
SMAR006706
Strigamia maritima
SMAR006706
I
0.852
YQE_05939
Dendroctonus ponderosae
YQE_05939
I
0.852
Aan_R001045
Calypte anna
Aan_R001045
I
0.852
Afo_R003467
Aptenodytes forsteri
Afo_R003467
I
0.852
Alligator_sinensis_CCG002586.1
Alligator sinensis
Alligator_sinensis_CCG002586.1
I
0.852
Brh_R002964
Buceros rhinoceros
Brh_R002964
I
0.852
Cmyd_10011491
Chelonia mydas
Cmyd_10011491
I
0.852
ENSP00000275461-D1
Bos grunniens
ENSP00000275461-D1
I
0.852
ENSP00000275461
Macaca fascicularis
ENSP00000275461
I
0.852
Gfo_R002784
Geospiza fortis
Gfo_R002784
I
0.852
Myotis_brandtii_FERD3L_10031741
Myotis brandtii
Myotis_brandtii_FERD3L_10031741
I
0.852
Ogr11551
Ophisaurus gracilis
Ogr11551
I
0.852
Ocbimv22002150m.g
Octopus bimaculoides
Ocbimv22002150m.g
I
0.852
LCUP001463
Lucilia cuprina
LCUP001463
I
0.852
ferd3l
Xenopus tropicalis
XB-GENE-983144
I
0.852
LLOJ008652
Lutzomyia longipalpis
LLOJ008652
I
0.852
MDOA011992
Musca domestica
MDOA011992
I
0.852
PPAI004805
Phlebotomus papatasi
PPAI004805
I
0.852