TCF12 (Vicugna pacos)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSVPAG00000006545 T038077_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tcf12
M01740_2.00
Mus musculus
NVCAYCTGB

VCAGRTGBN
PBM
Weirauch et al.(2014)
pTH5071
0.914 0.981
TCF12
M04137_2.00
Homo sapiens
VCACSTGB

VCASGTGB
SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX
0.914 0.981
Tcf12
M08062_2.00
Mus musculus
RRCAGCTGNNN

NNNCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0521.1
0.914 0.981
TCF12
M07805_2.00
Homo sapiens
NVDSCAGSTGB

VCASCTGSHBN
ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha
0.914 0.981
TCF12
M07806_2.00
Homo sapiens
VCASCTGB

VCAGSTGB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha
0.914 0.981
TCF12
M08731_2.00
Homo sapiens
CMCASCTGSH

DSCAGSTGKG
Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A
0.914 0.981
Tcf12
M08762_2.00
Mus musculus
VMCASCTGSH

DSCAGSTGKB
Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A
0.914 0.981
TCF12
M09458_2.00
Homo sapiens
NNVCAGCTGB

VCAGCTGBNN
Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465
0.914 0.981
TCF12
M09858_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEB_Q6
0.914 0.981
TCF12
M09859_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HTF4_Q2
0.914 0.981
TCF12
M09860_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_01
0.914 0.981
TCF12
M09861_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_03
0.914 0.981
TCF12
M09862_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_05
0.914 0.981
TCF12
M04138_2.00
Homo sapiens
NCAYCTGN

NCAGRTGN
SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX
0.914 0.981
Tcf3
M00753_2.00
Mus musculus
VCACCTGBN

NVCAGGTGB
PBM
Weirauch et al.(2013)
pTH3866
0.914 0.865
Tcf3
M01723_2.00
Mus musculus
NNVCACSTGB

VCASGTGBNN
PBM
Weirauch et al.(2014)
pTH4580
0.914 0.865
Tcf3
M00118_2.00
Mus musculus
VCAYCTGB

VCAGRTGB
PBM
Badis et al.(2009)
Tcfe2a_3865
0.914 0.865
Tcf4
M01750_2.00
Mus musculus
VCAGVTGBN

NVCABCTGB
PBM
Weirauch et al.(2014)
pTH5101
0.912 0.942
TCF4
M02807_2.00
Homo sapiens
HRCACCTGBN

NVCAGGTGYD
SELEX
Jolma et al.(2013)
TCF4_1
0.912 0.942
TCF4
M02808_2.00
Homo sapiens
NVCACCTBBN

NVVAGGTGBN
SELEX
Jolma et al.(2013)
TCF4_2
0.912 0.942
TCF4
M02728_2.00
Homo sapiens
RCACCTG

CAGGTGY
SELEX
Jolma et al.(2010)
TCF4_dimer
0.912 0.942
TCF4
M04214_2.00
Homo sapiens
VCACCTGB

VCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX
0.912 0.942
Tcf4
M08775_2.00
Mus musculus
HRCACCTGB

VCAGGTGYD
Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B
0.912 0.942
TCF4
M09461_2.00
Homo sapiens
ASWTCAAAGRVN

NBYCTTTGAWST
Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054
0.912 0.942
TCF4
M04215_2.00
Homo sapiens
VCACCTGN

NCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX
0.912 0.942
Tcf3
M09465_2.00
Mus musculus
ABWTCAAAGS

SCTTTGAWVT
Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724
0.886 0.942
Tcf3
M09466_2.00
Mus musculus
VCAGCTGBNN

NNVCAGCTGB
Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978
0.886 0.942
Tcf3
M09886_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E47_05
0.886 0.942
TCF3
M02775_2.00
Homo sapiens
NVCACCTGBN

NVCAGGTGBN
SELEX
Jolma et al.(2013)
TCF3_1
0.886 0.904
TCF3
M08710_2.00
Homo sapiens
VVCASCTGCHN

NDGCAGSTGBB
Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A
0.886 0.904
TCF3
M09791_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E12_Q6
0.886 0.904
TCF3
M09792_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_01
0.886 0.904
TCF3
M09793_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_02
0.886 0.904
TCF3
M09794_2.00
Homo sapiens
VVVVMCACCTGCNBB

VVNGCAGGTGKBBBB
Transfac
Matys et al.(2006)
V$E47_01
0.886 0.904
TCF3
M09795_2.00
Homo sapiens
NNKWRCACCTGYDNNN

NNNHRCAGGTGYWMNN
Transfac
Matys et al.(2006)
V$E47_02
0.886 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000006077 bHLH 578 631

Links

Other bHLH family TFs
Other Vicugna pacos TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL010018 Aedes aegypti AAEL010018 N
AALB007309 Anopheles albimanus AALB007309 N
AARA003537 Anopheles arabiensis AARA003537 N
AATE002975 Anopheles atroparvus AATE002975 N
ACOM036335 Anopheles coluzzii ACOM036335 N
ACUA014377 Anopheles culicifacies ACUA014377 N
ACYPI002842 Acyrthosiphon pisum ACYPI002842 N
ADAC008881 Anopheles darlingi ADAC008881 N
ADIR001662 Anopheles dirus ADIR001662 N
AEPI005384 Anopheles epiroticus AEPI005384 N
AFAF009086 Anopheles farauti AFAF009086 N
AFUN009703 Anopheles funestus AFUN009703 N
AGAP004937 Anopheles gambiae AGAP004937 N
AMEC010771 Anopheles melas AMEC010771 N
AMEM004326 Anopheles merus AMEM004326 N
AMIN011430 Anopheles minimus AMIN011430 N
AQUA002735 Anopheles quadriannulatus AQUA002735 N
ASTEI09049 Anopheles stephensi ASTEI09049 N
Cflo_03361--XP_397449.2_APIME Camponotus floridanus Cflo_03361--XP_397449.2_APIME N
CPIJ005674 Culex quinquefasciatus CPIJ005674 N
CpipJ_CPIJ005674 Culex pipiens CpipJ_CPIJ005674 N
GF10107 Drosophila ananassae FBgn0087148 N
GG15082 Drosophila erecta FBgn0107336 N
GH16406 Drosophila grimshawi FBgn0123877 N
GI12487 Drosophila mojavensis FBgn0135244 N
GM24938 Drosophila sechellia FBgn0179800 N
GJ12391 Drosophila virilis FBgn0199634 N
GK17751 Drosophila willistoni FBgn0219750 N
GE21305 Drosophila yakuba FBgn0238572 N
GA23356 Drosophila pseudoobscura FBgn0244758 N
Unr Drosophila melanogaster FBgn0263352 N
GB44291 Apis mellifera GB44291 N
HMEL010553 Heliconius melpomene HMEL010553 N
Hsal_01772--XP_397449.2_APIME Harpegnathos saltator Hsal_01772--XP_397449.2_APIME N
KGM_15374 Danaus plexippus KGM_15374 N
LCUP007228 Lucilia cuprina LCUP007228 N
LDEC004584 Leptinotarsa decemlineata LDEC004584 N
MDOA004006 Musca domestica MDOA004006 N
NV10220 Nasonia vitripennis NV10220 N
SINV23787 Solenopsis invicta SINV23787 N
TC002472 Tribolium castaneum TC002472 N