CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000009780
(
Xiphophorus maculatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSXMAG00000009780
T038142_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYOD1
M04116_2.00
Homo sapiens
BAACASSTGNYV
BRNCASSTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1
0.894
0.923
MYOD1
M04117_2.00
Homo sapiens
BRVCASMTGDCG
CGHCAKSTGBYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2
0.894
0.923
MYOD1
M04120_2.00
Homo sapiens
NAACASSTGNYV
BRNCASSTGTTN
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1
0.894
0.923
MYOD1
M04121_2.00
Homo sapiens
BRMCASCTGDCR
YGHCAGSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2
0.894
0.923
Myod1
M08060_2.00
Mus musculus
NVNRRCAGSTGBN
NVCASCTGYYNBN
ChIP-seq
Mathelier et al.(2014)
MA0499.1
0.894
0.923
MYOD1
M08724_2.00
Homo sapiens
NVNNRNRRCAGCTGN
NCAGCTGYYNYNNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A
0.894
0.923
Myod1
M08745_2.00
Mus musculus
NVNRRNRRCAGSTGB
VCASCTGYYNYYNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A
0.894
0.923
MYOD1
M09838_2.00
Homo sapiens
HRVCACCTGHBB
VVDCAGGTGBYD
Transfac
Matys et al.(2006)
V$MYOD_01
0.894
0.923
MYOD1
M09839_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOD_Q6_02
0.894
0.923
MYOD1
M09840_2.00
Homo sapiens
NVCABCTGNY
RNCAGVTGBN
Transfac
Matys et al.(2006)
V$MYOD_Q6
0.894
0.923
MYOD1
M04118_2.00
Homo sapiens
BAACANVTGTYV
BRACABNTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1
0.894
0.923
MYOD1
M04119_2.00
Homo sapiens
BRRCASSTGDCR
YGHCASSTGYYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2
0.894
0.923
MYOD1
M04122_2.00
Homo sapiens
NAMCASSTGBYV
BRVCASSTGKTN
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1
0.894
0.923
MYOD1
M04123_2.00
Homo sapiens
BRMCASVTGNCR
YGNCABSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2
0.894
0.923
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH
DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.846
0.865
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC
GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.846
0.865
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC
GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.846
0.865
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY
RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.846
0.865
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC
GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.846
0.865
Myf5
M09463_2.00
Mus musculus
NRRCAGCTGY
RCAGCTGYYN
Misc
Heinz et al.(2010)
GM-Myf5_GSE24852
0.840
0.904
MYF5
M09821_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYF5_Q6
0.840
0.904
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000009796
bHLH
91
142
RRKAATMRERRRLSKVNDAFETLKRCTASNPNQRLPKVEILRNAISYIESLQ
Links
Other
bHLH
family TFs
Other
Xiphophorus maculatus
TFs
167 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL014322
Aedes aegypti
AAEL014322
I
0.840
AAL11024
Xenopus tropicalis
AAL11024
I
0.840
AALB008334
Anopheles albimanus
AALB008334
I
0.840
Aan_R006542
Calypte anna
Aan_R006542
I
0.864
AARA002094
Anopheles arabiensis
AARA002094
I
0.840
AATE018889
Anopheles atroparvus
AATE018889
I
0.840
ACHR010174
Anopheles christyi
ACHR010174
I
0.840
ACOM034431
Anopheles coluzzii
ACOM034431
I
0.840
ACUA006973
Anopheles culicifacies
ACUA006973
I
0.840
ADAC002492
Anopheles darlingi
ADAC002492
I
0.840
ADIR010448
Anopheles dirus
ADIR010448
I
0.840
AEPI006062
Anopheles epiroticus
AEPI006062
I
0.840
AFAF001067
Anopheles farauti
AFAF001067
I
0.840
Afo_R014556
Aptenodytes forsteri
Afo_R014556
I
0.864
AFUN011634
Anopheles funestus
AFUN011634
I
0.840
Alligator_sinensis_CCG013129.1
Alligator sinensis
Alligator_sinensis_CCG013129.1
I
0.864
Alligator_sinensis_CCG017419.1
Alligator sinensis
Alligator_sinensis_CCG017419.1
I
0.840
AMAM006832
Anopheles maculatus
AMAM006832
I
0.840
AMEM001613
Anopheles merus
AMEM001613
I
0.840
AMIN003460
Anopheles minimus
AMIN003460
I
0.840
AQUA000514
Anopheles quadriannulatus
AQUA000514
I
0.840
ASTEI05690
Anopheles stephensi
ASTEI05690
I
0.840
Brh_R000054
Buceros rhinoceros
Brh_R000054
I
0.840
Brh_R006718
Buceros rhinoceros
Brh_R006718
I
0.864
CPIJ005345
Culex quinquefasciatus
CPIJ005345
I
0.840
CpipJ_CPIJ005345
Culex pipiens
CpipJ_CPIJ005345
I
0.840
ENSAMEG00000013193
Ailuropoda melanoleuca
ENSAMEG00000013193
I
0.840
ENSAMEG00000018197
Ailuropoda melanoleuca
ENSAMEG00000018197
I
0.894
ENSAMXG00000000428
Astyanax mexicanus
ENSAMXG00000000428
I
0.840
ENSAMXG00000017040
Astyanax mexicanus
ENSAMXG00000017040
I
0.884
ENSAPLG00000001124
Anas platyrhynchos
ENSAPLG00000001124
I
0.840
ENSAPLG00000005673
Anas platyrhynchos
ENSAPLG00000005673
I
0.864
ENSBTAP00000002868-D1
Bos grunniens
ENSBTAP00000002868-D1
I
0.894
ENSCSAG00000003889
Chlorocebus sabaeus
ENSCSAG00000003889
I
0.840
ENSCSAG00000004934
Chlorocebus sabaeus
ENSCSAG00000004934
I
0.894
ENSFALG00000000758
Ficedula albicollis
ENSFALG00000000758
I
0.864
ENSFALG00000010507
Ficedula albicollis
ENSFALG00000010507
I
0.840
ENSGMOG00000011389
Gadus morhua
ENSGMOG00000011389
I
0.884
ENSGMOG00000016963
Gadus morhua
ENSGMOG00000016963
I
0.890
ENSLACG00000014430
Latimeria chalumnae
ENSLACG00000014430
I
0.864
ENSLOCG00000002164
Lepisosteus oculatus
ENSLOCG00000002164
I
0.864
ENSMEUG00000010628
Macropus eugenii
ENSMEUG00000010628
I
0.840
ENSMEUG00000014270
Macropus eugenii
ENSMEUG00000014270
I
0.894
ENSMGAG00000007210
Meleagris gallopavo
ENSMGAG00000007210
I
0.864
ENSMGAG00000011091
Meleagris gallopavo
ENSMGAG00000011091
I
0.840
ENSMICG00000011211
Microcebus murinus
ENSMICG00000011211
I
0.840
ENSMPUG00000004935
Mustela putorius furo
ENSMPUG00000004935
I
0.840
ENSMPUG00000013563
Mustela putorius furo
ENSMPUG00000013563
I
0.894
ENSNLEG00000005207
Nomascus leucogenys
ENSNLEG00000005207
I
0.840
ENSOARG00000015159
Ovis aries
ENSOARG00000015159
I
0.840
ENSOARG00000025174
Ovis aries
ENSOARG00000025174
I
0.894
ENSONIG00000000077
Oreochromis niloticus
ENSONIG00000000077
I
0.840
ENSONIG00000007897
Oreochromis niloticus
ENSONIG00000007897
I
0.914
ENSONIG00000010796
Oreochromis niloticus
ENSONIG00000010796
I
0.884
ENSP00000228644
Macaca fascicularis
ENSP00000228644
I
0.840
ENSPANG00000011946
Papio anubis
ENSPANG00000011946
I
0.894
ENSPANG00000020394
Papio anubis
ENSPANG00000020394
I
0.840
ENSPFOG00000009843
Poecilia formosa
ENSPFOG00000009843
I
0.914
ENSPFOG00000013532
Poecilia formosa
ENSPFOG00000013532
I
0.884
ENSPFOG00000017488
Poecilia formosa
ENSPFOG00000017488
I
0.840
ENSPPYG00000003449
Pongo abelii
ENSPPYG00000003449
I
0.894
ENSPPYG00000004800
Pongo abelii
ENSPPYG00000004800
I
0.840
ENSPSIG00000012000
Pelodiscus sinensis
ENSPSIG00000012000
I
0.840
ENSSARG00000002401
Sorex araneus
ENSSARG00000002401
I
0.894
ENSSHAG00000013391
Sarcophilus harrisii
ENSSHAG00000013391
I
0.840
ENSSHAG00000017220
Sarcophilus harrisii
ENSSHAG00000017220
I
0.894
ENSSTOG00000011556
Ictidomys tridecemlineatus
ENSSTOG00000011556
I
0.894
ENSSTOG00000015810
Ictidomys tridecemlineatus
ENSSTOG00000015810
I
0.840
ENSTGUG00000007755
Taeniopygia guttata
ENSTGUG00000007755
I
0.840
ENSTSYG00000003282
Tarsius syrichta
ENSTSYG00000003282
I
0.840
ENSXMAG00000007430
Xiphophorus maculatus
ENSXMAG00000007430
I
0.884
ENSXMAG00000017496
Xiphophorus maculatus
ENSXMAG00000017496
I
0.840
GA10192
Drosophila pseudoobscura
FBgn0070251
I
0.846
GD18361
Drosophila simulans
FBgn0189889
I
0.846
GE23932
Drosophila yakuba
FBgn0241076
I
0.846
GF18746
Drosophila ananassae
FBgn0095763
I
0.846
Gfo_R009107
Geospiza fortis
Gfo_R009107
I
0.864
GG12413
Drosophila erecta
FBgn0104701
I
0.846
GH13904
Drosophila grimshawi
FBgn0121380
I
0.846
GI24830
Drosophila mojavensis
FBgn0147551
I
0.846
GJ24474
Drosophila virilis
FBgn0211554
I
0.846
GK22777
Drosophila willistoni
FBgn0224749
I
0.846
GL13832
Drosophila persimilis
FBgn0151437
I
0.846
GM23547
Drosophila sechellia
FBgn0178413
I
0.846
LCUP007809
Lucilia cuprina
LCUP007809
I
0.846
MYF5
Anolis carolinensis
ENSACAG00000014431
I
0.848
MYF5
Bos taurus
ENSBTAG00000026972
I
0.840
MYF5
Canis familiaris
ENSCAFG00000005808
I
0.840
MYF5
Choloepus hoffmanni
ENSCHOG00000008319
I
0.840
MYF5
Callithrix jacchus
ENSCJAG00000019340
I
0.840
MYF5
Cavia porcellus
ENSCPOG00000007766
I
0.840
myf5
Danio rerio
ENSDARG00000007277
I
0.840
MYF5
Dasypus novemcinctus
ENSDNOG00000034747
I
0.840
Myf5
Dipodomys ordii
ENSDORG00000015437
I
0.840
MYF5
Equus caballus
ENSECAG00000020047
I
0.840
MYF5
Erinaceus europaeus
ENSEEUG00000011612
I
0.840
MYF5
Echinops telfairi
ENSETEG00000011255
I
0.840
MYF5
Felis catus
ENSFCAG00000015011
I
0.840
MYF5
Homo sapiens
ENSG00000111049
D
0.840
MYF5
Gallus gallus
ENSGALG00000028091
I
0.840
MYF5
Gorilla gorilla
ENSGGOG00000004366
I
0.840
MYF5
Loxodonta africana
ENSLAFG00000016473
I
0.840
MYF5
Myotis lucifugus
ENSMLUG00000004943
I
0.840
MYF5
Macaca mulatta
ENSMMUG00000011669
I
0.840
MYF5
Monodelphis domestica
ENSMODG00000020478
I
0.840
Myf5
Mus musculus
ENSMUSG00000000435
D
0.840
MYF5
Ornithorhynchus anatinus
ENSOANG00000004853
I
0.840
MYF5
Oryctolagus cuniculus
ENSOCUG00000025477
I
0.840
MYF5
Otolemur garnettii
ENSOGAG00000001039
I
0.840
MYF5
Ochotona princeps
ENSOPRG00000009007
I
0.840
myf5
Oryzias latipes
ENSORLG00000016257
I
0.840
MYF5
Procavia capensis
ENSPCAG00000001722
I
0.840
MYF5
Pan troglodytes
ENSPTRG00000005261
I
0.840
MYF5
Pteropus vampyrus
ENSPVAG00000003336
I
0.840
Myf5
Rattus norvegicus
ENSRNOG00000004768
I
0.840
MYF5
Sorex araneus
ENSSARG00000008217
I
0.840
MYF5
Sus scrofa
ENSSSCG00000000937
I
0.840
MYF5
Tupaia belangeri
ENSTBEG00000008363
I
0.840
MYF5
Tursiops truncatus
ENSTTRG00000014691
I
0.840
MYF5
Vicugna pacos
ENSVPAG00000001927
I
0.840
myf5
Xenopus tropicalis
XB-GENE-493550
I
0.840
myf5.L
Xenopus laevis
XB-GENE-866267
I
0.840
MYF6
Ochotona princeps
ENSOPRG00000008999
I
0.847
MYOD1
Anolis carolinensis
ENSACAG00000000054
I
0.894
MYOD1
Bos taurus
ENSBTAG00000002216
I
0.894
MYOD1
Canis familiaris
ENSCAFG00000009066
I
0.894
MYOD1
Callithrix jacchus
ENSCJAG00000009258
I
0.894
MYOD1
Cavia porcellus
ENSCPOG00000021351
I
0.894
myod1
Danio rerio
ENSDARG00000030110
I
0.884
MYOD1
Dasypus novemcinctus
ENSDNOG00000017164
I
0.894
MYOD1
Equus caballus
ENSECAG00000002132
I
0.894
MYOD1
Echinops telfairi
ENSETEG00000003979
I
0.894
MYOD1
Felis catus
ENSFCAG00000004973
I
0.894
MYOD1
Homo sapiens
ENSG00000129152
D
0.894
myod1
Gasterosteus aculeatus
ENSGACG00000008444
I
0.884
myod1
Gasterosteus aculeatus
ENSGACG00000017350
I
0.860
MYOD1
Gallus gallus
ENSGALG00000006216
I
0.864
MYOD1
Gorilla gorilla
ENSGGOG00000008222
I
0.894
MYOD1
Loxodonta africana
ENSLAFG00000018353
I
0.894
MYOD1
Microcebus murinus
ENSMICG00000005566
I
0.894
MYOD1
Myotis lucifugus
ENSMLUG00000007940
I
0.894
MYOD1
Macaca mulatta
ENSMMUG00000006400
I
0.894
MYOD1
Monodelphis domestica
ENSMODG00000006749
I
0.894
Myod1
Mus musculus
ENSMUSG00000009471
D
0.894
MYOD1
Otolemur garnettii
ENSOGAG00000029784
I
0.894
MYOD1
Ochotona princeps
ENSOPRG00000002390
I
0.894
myod1
Oryzias latipes
ENSORLG00000000694
I
0.884
MYOD1
Procavia capensis
ENSPCAG00000001317
I
0.894
MYOD1
Pan troglodytes
ENSPTRG00000003406
I
0.894
MYOD1
Pteropus vampyrus
ENSPVAG00000012829
I
0.894
Myod1
Rattus norvegicus
ENSRNOG00000011306
I
0.894
MYOD1
Sus scrofa
ENSSSCG00000013375
I
0.894
MYOD1
Tupaia belangeri
ENSTBEG00000003438
I
0.894
MYOD1
Taeniopygia guttata
ENSTGUG00000008814
I
0.864
myod1
Tetraodon nigroviridis
ENSTNIG00000002808
I
0.864
myod1
Tetraodon nigroviridis
ENSTNIG00000018793
I
0.902
myod1
Takifugu rubripes
ENSTRUG00000016609
I
0.864
MYOD1
Tursiops truncatus
ENSTTRG00000013869
I
0.894
myod1
Xenopus tropicalis
XB-GENE-1017498
I
0.864
myod1.L
Xenopus laevis
XB-GENE-6252600
I
0.858
myod1.S
Xenopus laevis
XB-GENE-1017506
I
0.864
myod2
Takifugu rubripes
ENSTRUG00000014891
I
0.902
Myotis_brandtii_MYF5_10034131
Myotis brandtii
Myotis_brandtii_MYF5_10034131
I
0.840
nau
Drosophila melanogaster
FBgn0002922
D
0.846
Ogr16343
Ophisaurus gracilis
Ogr16343
I
0.864
PHUM424120
Pediculus humanus
PHUM424120
I
0.846
Pvit_01710
Pogona vitticeps
Pvit_01710
I
0.864