CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GG12413
(
Drosophila erecta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
FBgn0104701
T038590_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH
DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.914
1.000
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC
GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.914
1.000
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC
GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.914
1.000
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY
RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.914
1.000
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC
GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.914
1.000
MYOD1
M04116_2.00
Homo sapiens
BAACASSTGNYV
BRNCASSTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1
0.866
0.885
MYOD1
M04117_2.00
Homo sapiens
BRVCASMTGDCG
CGHCAKSTGBYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2
0.866
0.885
MYOD1
M04120_2.00
Homo sapiens
NAACASSTGNYV
BRNCASSTGTTN
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1
0.866
0.885
MYOD1
M04121_2.00
Homo sapiens
BRMCASCTGDCR
YGHCAGSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2
0.866
0.885
Myod1
M08060_2.00
Mus musculus
NVNRRCAGSTGBN
NVCASCTGYYNBN
ChIP-seq
Mathelier et al.(2014)
MA0499.1
0.866
0.885
MYOD1
M08724_2.00
Homo sapiens
NVNNRNRRCAGCTGN
NCAGCTGYYNYNNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A
0.866
0.885
Myod1
M08745_2.00
Mus musculus
NVNRRNRRCAGSTGB
VCASCTGYYNYYNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A
0.866
0.885
MYOD1
M09838_2.00
Homo sapiens
HRVCACCTGHBB
VVDCAGGTGBYD
Transfac
Matys et al.(2006)
V$MYOD_01
0.866
0.885
MYOD1
M09839_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOD_Q6_02
0.866
0.885
MYOD1
M09840_2.00
Homo sapiens
NVCABCTGNY
RNCAGVTGBN
Transfac
Matys et al.(2006)
V$MYOD_Q6
0.866
0.885
MYOD1
M04118_2.00
Homo sapiens
BAACANVTGTYV
BRACABNTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1
0.866
0.885
MYOD1
M04119_2.00
Homo sapiens
BRRCASSTGDCR
YGHCASSTGYYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2
0.866
0.885
MYOD1
M04122_2.00
Homo sapiens
NAMCASSTGBYV
BRVCASSTGKTN
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1
0.866
0.885
MYOD1
M04123_2.00
Homo sapiens
BRMCASVTGNCR
YGNCABSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2
0.866
0.885
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0130959
bHLH
162
213
RRKAATMRERRRLRKVNEAFEILKRRTSSNPNQRLPKVEILRNAIEYIESLE
Links
Other
bHLH
family TFs
Other
Drosophila erecta
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nau
Drosophila melanogaster
FBgn0002922
D
0.914
GA10192
Drosophila pseudoobscura
FBgn0070251
I
0.914
GF18746
Drosophila ananassae
FBgn0095763
I
0.914
GH13904
Drosophila grimshawi
FBgn0121380
I
0.914
GI24830
Drosophila mojavensis
FBgn0147551
I
0.914
GL13832
Drosophila persimilis
FBgn0151437
I
0.914
GM23547
Drosophila sechellia
FBgn0178413
I
0.914
GD18361
Drosophila simulans
FBgn0189889
I
0.914
GJ24474
Drosophila virilis
FBgn0211554
I
0.914
GK22777
Drosophila willistoni
FBgn0224749
I
0.914
GE23932
Drosophila yakuba
FBgn0241076
I
0.914
LCUP007809
Lucilia cuprina
LCUP007809
I
0.914
Sjc_0011830
Schistosoma japonicum
Sjc_0011830
I
0.901
PHUM424120
Pediculus humanus
PHUM424120
I
0.890
CapteG36721
Capitella teleta
CapteG36721
I
0.884
CGI_10007380
Crassostrea gigas
CGI_10007380
I
0.884
EFV52759
Trichinella spiralis
EFV52759
I
0.884
GB55306
Apis mellifera
GB55306
I
0.884
NV10294
Nasonia vitripennis
NV10294
I
0.884
RPRC009735
Rhodnius prolixus
RPRC009735
I
0.884
SPU_021119
Strongylocentrotus purpuratus
SPU_021119
I
0.884
Cflo_03885--XP_001120527.1_APIME
Camponotus floridanus
Cflo_03885--XP_001120527.1_APIME
I
0.884
Hsal_05065--XP_001120527.1_APIME
Harpegnathos saltator
Hsal_05065--XP_001120527.1_APIME
I
0.884
fgenesh2_pg.scaffold_226000031
Branchiostoma floridae
fgenesh2_pg.scaffold_226000031
I
0.884
fgenesh2_pg.scaffold_226000032
Branchiostoma floridae
fgenesh2_pg.scaffold_226000032
I
0.884
fgenesh2_pg.scaffold_29000123
Branchiostoma floridae
fgenesh2_pg.scaffold_29000123
I
0.884
Ocbimv22002759m.g
Octopus bimaculoides
Ocbimv22002759m.g
I
0.884
CLEC002330
Cimex lectularius
CLEC002330
I
0.884
LLOJ004446
Lutzomyia longipalpis
LLOJ004446
I
0.884
D917_06339
Trichinella nativa
D917_06339
I
0.884
D918_04086
Trichuris suis
D918_04086
I
0.884
nRc.2.0.1.g24248
Romanomermis culicivorax
nRc.2.0.1.g24248
I
0.884
SBAD_0001285401
Soboliphyme baturini
SBAD_0001285401
I
0.884
TMUE_s0045001800
Trichuris muris
TMUE_s0045001800
I
0.884
TTRE_0000002701
Trichuris trichiura
TTRE_0000002701
I
0.884
ECANG7_02004
Echinococcus canadensis
ECANG7_02004
I
0.880
EmuJ_001053100
Echinococcus multilocularis
EmuJ_001053100
I
0.880
HmN_000553800
Hymenolepis microstoma
HmN_000553800
I
0.880
HNAJ_0001324201
Hymenolepis nana
HNAJ_0001324201
I
0.880
MCOS_0000168001
Mesocestoides corti
MCOS_0000168001
I
0.880
SPER_0001779001
Spirometra erinaceieuropaei
SPER_0001779001
I
0.880
SPER_0002215301
Spirometra erinaceieuropaei
SPER_0002215301
I
0.880
SSLN_0000613901
Schistocephalus solidus
SSLN_0000613901
I
0.880
TASK_0000583801
Taenia asiatica
TASK_0000583801
I
0.880
TsM_000079400
Taenia solium
TsM_000079400
I
0.880
Smp_167400
Schistosoma mansoni
Smp_167400
I
0.871
SMU15001149
Schmidtea mediterranea
SMU15001149
I
0.871
A_07871
Schistosoma haematobium
A_07871
I
0.871
csin100742
Clonorchis sinensis
csin100742
I
0.871
D915_09890
Fasciola hepatica
D915_09890
I
0.871
ECPE_0001678601
Echinostoma caproni
ECPE_0001678601
I
0.871
T265_10140
Opisthorchis viverrini
T265_10140
I
0.871
TRE_0000306101
Trichobilharzia regenti
TRE_0000306101
I
0.871
MYOD1
Anolis carolinensis
ENSACAG00000000054
I
0.866
ENSAMEG00000018197
Ailuropoda melanoleuca
ENSAMEG00000018197
I
0.866
MYOD1
Bos taurus
ENSBTAG00000002216
I
0.866
MYOD1
Canis familiaris
ENSCAFG00000009066
I
0.866
MYOD1
Callithrix jacchus
ENSCJAG00000009258
I
0.866
MYOD1
Cavia porcellus
ENSCPOG00000021351
I
0.866
ENSCSAG00000004934
Chlorocebus sabaeus
ENSCSAG00000004934
I
0.866
MYOD1
Dasypus novemcinctus
ENSDNOG00000017164
I
0.866
MYOD1
Equus caballus
ENSECAG00000002132
I
0.866
MYOD1
Echinops telfairi
ENSETEG00000003979
I
0.866
MYOD1
Felis catus
ENSFCAG00000004973
I
0.866
MYOD1
Homo sapiens
ENSG00000129152
D
0.866
MYOD1
Gorilla gorilla
ENSGGOG00000008222
I
0.866
MYOD1
Loxodonta africana
ENSLAFG00000018353
I
0.866
ENSMEUG00000014270
Macropus eugenii
ENSMEUG00000014270
I
0.866
MYOD1
Microcebus murinus
ENSMICG00000005566
I
0.866
MYOD1
Myotis lucifugus
ENSMLUG00000007940
I
0.866
MYOD1
Macaca mulatta
ENSMMUG00000006400
I
0.866
MYOD1
Monodelphis domestica
ENSMODG00000006749
I
0.866
ENSMPUG00000013563
Mustela putorius furo
ENSMPUG00000013563
I
0.866
Myod1
Mus musculus
ENSMUSG00000009471
D
0.866
ENSOARG00000025174
Ovis aries
ENSOARG00000025174
I
0.866
MYOD1
Otolemur garnettii
ENSOGAG00000029784
I
0.866
MYOD1
Ochotona princeps
ENSOPRG00000002390
I
0.866
ENSPANG00000011946
Papio anubis
ENSPANG00000011946
I
0.866
MYOD1
Procavia capensis
ENSPCAG00000001317
I
0.866
ENSPPYG00000003449
Pongo abelii
ENSPPYG00000003449
I
0.866
MYOD1
Pan troglodytes
ENSPTRG00000003406
I
0.866
MYOD1
Pteropus vampyrus
ENSPVAG00000012829
I
0.866
Myod1
Rattus norvegicus
ENSRNOG00000011306
I
0.866
ENSSARG00000002401
Sorex araneus
ENSSARG00000002401
I
0.866
ENSSHAG00000017220
Sarcophilus harrisii
ENSSHAG00000017220
I
0.866
MYOD1
Sus scrofa
ENSSSCG00000013375
I
0.866
ENSSTOG00000011556
Ictidomys tridecemlineatus
ENSSTOG00000011556
I
0.866
MYOD1
Tupaia belangeri
ENSTBEG00000003438
I
0.866
MYOD1
Tursiops truncatus
ENSTTRG00000013869
I
0.866
ENSBTAP00000002868-D1
Bos grunniens
ENSBTAP00000002868-D1
I
0.866
TC015855
Tribolium castaneum
TC015855
I
0.863
YQE_11476
Dendroctonus ponderosae
YQE_11476
I
0.863
LDEC009949
Leptinotarsa decemlineata
LDEC009949
I
0.863
CpipJ_CPIJ005345
Culex pipiens
CpipJ_CPIJ005345
I
0.860
AAEL014322
Aedes aegypti
AAEL014322
I
0.860
ADAC002492
Anopheles darlingi
ADAC002492
I
0.860
CPIJ005345
Culex quinquefasciatus
CPIJ005345
I
0.860
Sakowv30008488m.g
Saccoglossus kowalevskii
Sakowv30008488m.g
I
0.860
AALB008334
Anopheles albimanus
AALB008334
I
0.860
AARA002094
Anopheles arabiensis
AARA002094
I
0.860
AATE018889
Anopheles atroparvus
AATE018889
I
0.860
ACHR010174
Anopheles christyi
ACHR010174
I
0.860
ACOM034431
Anopheles coluzzii
ACOM034431
I
0.860
ACUA006973
Anopheles culicifacies
ACUA006973
I
0.860
ADIR010448
Anopheles dirus
ADIR010448
I
0.860
AEPI006062
Anopheles epiroticus
AEPI006062
I
0.860
AFAF001067
Anopheles farauti
AFAF001067
I
0.860
AFUN011634
Anopheles funestus
AFUN011634
I
0.860
AMAM006832
Anopheles maculatus
AMAM006832
I
0.860
AMEM001613
Anopheles merus
AMEM001613
I
0.860
AMIN003460
Anopheles minimus
AMIN003460
I
0.860
AQUA000514
Anopheles quadriannulatus
AQUA000514
I
0.860
ASTEI05690
Anopheles stephensi
ASTEI05690
I
0.860
LotgiG99982
Lottia gigantea
LotgiG99982
I
0.849
ENSGMOG00000016963
Gadus morhua
ENSGMOG00000016963
I
0.846
ENSONIG00000007897
Oreochromis niloticus
ENSONIG00000007897
I
0.846
ENSPFOG00000009843
Poecilia formosa
ENSPFOG00000009843
I
0.846
ENSXMAG00000009780
Xiphophorus maculatus
ENSXMAG00000009780
I
0.846
MYF6
Ochotona princeps
ENSOPRG00000008999
I
0.844