CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM10936
(
Drosophila sechellia
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
FBgn0165881
T038805_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Fer1
M03620_2.00
Drosophila melanogaster
VDCASCTGHY
RDCAGSTGHB
SELEX
Nitta et al.(2015)
Fer1_1
0.914
1.000
Fer1
M05990_2.00
Drosophila melanogaster
HVCASMTGWCV
BGWCAKSTGBD
B1H
Zhu et al.(2011)
Fer1_da_SANGER_10_FBgn0037475
0.914
1.000
Fer1
M05991_2.00
Drosophila melanogaster
WYRHCAGCTGACG
CGTCAGCTGDYRW
B1H
Zhu et al.(2011)
Fer1_SANGER_5_FBgn0037475
0.914
1.000
PTF1A
M04156_2.00
Homo sapiens
AACAGCTGACRB
VYGTCAGCTGTT
SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX
0.894
0.865
PTF1A
M08736_2.00
Homo sapiens
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B
0.894
0.865
Ptf1a
M08757_2.00
Mus musculus
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A
0.894
0.865
Ptf1a
M09470_2.00
Mus musculus
NVVCASSTGB
VCASSTGBBN
Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459
0.894
0.865
PTF1A
M04157_2.00
Homo sapiens
AMCAGCTGACRB
VYGTCAGCTGKT
SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX
0.894
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0192413
bHLH
82
134
QRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLS
Links
Other
bHLH
family TFs
Other
Drosophila sechellia
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_12232
Ancylostoma ceylanicum
ANCCEY_12232
N
ANCDUO_06286
Ancylostoma duodenale
ANCDUO_06286
I
ASU_08868
Ascaris suum
ASU_08868
I
ASU_11536
Ascaris suum
ASU_11536
I
Bm3512
Brugia malayi
Bm3512
I
BTMF_0001011301
Brugia timori
BTMF_0001011301
I
BXY_1717400
Bursaphelenchus xylophilus
BXY_1717400
I
CapteG52697
Capitella teleta
CapteG52697
I
CBG11192
Caenorhabditis briggsae
CBG11192
I
CBN23227
Caenorhabditis brenneri
CBN23227
I
ceh-38
Caenorhabditis elegans
WBGene00000459
I
CJA03729
Caenorhabditis japonica
CJA03729
I
CRE26474
Caenorhabditis remanei
CRE26474
I
DICVIV_06959
Dictyocaulus viviparus
DICVIV_06959
I
DILT_0001350901
Diphyllobothrium latum
DILT_0001350901
I
DME_0000092301
Dracunculus medinensis
DME_0000092301
I
ECANG7_03124
Echinococcus canadensis
ECANG7_03124
I
EEL_0000016301
Elaeophora elaphi
EEL_0000016301
I
EVEC_0000332701
Enterobius vermicularis
EVEC_0000332701
I
GPLIN_001052100
Globodera pallida
GPLIN_001052100
I
HCOI01220000
Haemonchus contortus
HCOI01220000
I
L596_g1964
Steinernema carpocapsae
L596_g1964
I
L889_g27415
Steinernema feltiae
L889_g27415
I
L892_g29126
Steinernema scapterisci
L892_g29126
N
L893_g20975
Steinernema glaseri
L893_g20975
I
L898_g12845
Steinernema monticolum
L898_g12845
I
LOAG_08712
Loa loa
LOAG_08712
I
MhA1_Contig512.frz3.fgene1
Meloidogyne hapla
MhA1_Contig512.frz3.fgene1
I
Minc16757
Meloidogyne incognita
Minc16757
I
nAv.1.0.1.g09678
Acanthocheilonema viteae
nAv.1.0.1.g09678
I
nDi.2.2.2.g00186
Dirofilaria immitis
nDi.2.2.2.g00186
I
NECAME_06517
Necator americanus
NECAME_06517
N
nLs.2.1.2.g01435
Litomosoides sigmodontis
nLs.2.1.2.g01435
I
nOo.2.0.1.g10331
Onchocerca ochengi
nOo.2.0.1.g10331
I
nRc.2.0.1.g02844
Romanomermis culicivorax
nRc.2.0.1.g02844
N
PTRK_0001075300
Parastrongyloides trichosuri
PTRK_0001075300
N
scaffold421-EXSNAP2012.16
Pristionchus exspectatus
scaffold421-EXSNAP2012.16
I
Smp_196950
Schistosoma mansoni
Smp_196950
I
SMUV_0000999101
Syphacia muris
SMUV_0000999101
I
SPAL_0000737300
Strongyloides papillosus
SPAL_0000737300
N
SPER_0000876901
Spirometra erinaceieuropaei
SPER_0000876901
I
SPER_0000877001
Spirometra erinaceieuropaei
SPER_0000877001
I
SSTP_0001162200
Strongyloides stercoralis
SSTP_0001162200
N
SVE_1027900
Strongyloides venezuelensis
SVE_1027900
N
TASK_0000698901
Taenia asiatica
TASK_0000698901
I
TCLT_0000779601
Thelazia callipaeda
TCLT_0000779601
I
TMUE_s0014009100
Trichuris muris
TMUE_s0014009100
I
TsM_001008400
Taenia solium
TsM_001008400
I
TTRE_0000086601
Trichuris trichiura
TTRE_0000086601
I
WBGene00247461
Onchocerca volvulus
WBGene00247461
I
WUBG_00613
Wuchereria bancrofti
WUBG_00613
N