fgenesh2_kg.4__1109__AT2G31220.1 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh2_kg.4__1109__AT2G31220.1 T039130_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH10
M06731_2.00 		Arabidopsis thaliana
YCACCGACANHDNH
DNHDNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
bHLH10_col_a 		0.902 0.960
BHLH10
M06732_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
bHLH10_colamp_a 		0.902 0.960
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.4__1109__AT2G31220.1 bHLH 237 286

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_401648.1 Arabidopsis lyrata scaffold_401648.1 N 0.844
BHLH10 Arabidopsis thaliana AT2G31220 D 0.902
Bostr.24513s0102 Boechera stricta Bostr.24513s0102 I 0.902
Cagra.6952s0001 Capsella grandiflora Cagra.6952s0001 I 0.902
Carubv10023056m.g Capsella rubella Carubv10023056m.g I 0.902