bHLH104 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh2_kg.7__2895__AT4G14410.2 T039161_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH104
M01706_2.00 		Arabidopsis thaliana
GGCACGTGCC
GGCACGTGCC		 PBM
Weirauch et al.(2014)
pTH7365 		0.914 0.980
BHLH104
M06737_2.00 		Arabidopsis thaliana
GVCACGTGBMDDBHNSDNBH
DVNHSNDVHHKVCACGTGBC		 Dap-seq
OMalley et al.(2016)
bHLH104_col_b 		0.914 0.980
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.7__2895__AT4G14410.2 bHLH 127 176

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH104 Arabidopsis thaliana AT4G14410 D 0.914
Bostr.0597s0053 Boechera stricta Bostr.0597s0053 I 0.914
Cagra.1718s0002 Capsella grandiflora Cagra.1718s0002 I 0.914
Carubv10005335m.g Capsella rubella Carubv10005335m.g I 0.914
Thhalv10025927m.g Eutrema salsugineum Thhalv10025927m.g I 0.914
Bra041033 Brassica rapa Bra041033 I 0.911
Bo4g126940 Brassica oleracea Bo4g126940 I 0.891
MTR_1g043430 Medicago truncatula MTR_1g043430 I 0.878
Ca_23174 Cicer arietinum Ca_23174 I 0.878
evm.TU.supercontig_44.78 Carica papaya evm.TU.supercontig_44.78 I 0.859
Cla021854 Citrullus lanatus Cla021854 I 0.857
Cucsa.255290 Cucumis sativus Cucsa.255290 I 0.857
Lus10022186.g Linum usitatissimum Lus10022186.g I 0.857
Bo1g102270 Brassica oleracea Bo1g102270 I 0.856
Bo7g040830 Brassica oleracea Bo7g040830 I 0.856
Bra014923 Brassica rapa Bra014923 I 0.856
gene11436-v1.0-hybrid Fragaria vesca gene11436-v1.0-hybrid I 0.856
PRUPE_ppa011217mg Prunus persica PRUPE_ppa011217mg I 0.846
Ciclev10005872m.g Citrus clementina Ciclev10005872m.g I 0.846
orange1.1g028060m.g Citrus sinensis orange1.1g028060m.g I 0.846
Gorai.011G172500 Gossypium raimondii Gorai.011G172500 I 0.844
GLYMA10G01010 Glycine max GLYMA10G01010 I 0.842
GLYMA20G22010 Glycine max GLYMA20G22010 I 0.842
Solyc10g006510.2 Solanum lycopersicum Solyc10g006510.2 I 0.842