CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA02G42570
(
Glycine max
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GLYMA02G42570
T039495_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK01630.1
M01118_2.00
Cannabis sativa
GCACGTGD
HCACGTGC
PBM
Lambert et al.(2019)
pTH11426
0.873
0.920
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA02G42570.1
bHLH
101
150
ASKSHSQAEKRRRDRINAQLATLRKLIPMSDKMDKAALLGSVVDHVKDLK
Links
Other
bHLH
family TFs
Other
Glycine max
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.012G078100
Gossypium raimondii
Gorai.012G078100
I
0.914
PGSC0003DMG400027725
Solanum tuberosum
PGSC0003DMG400027725
I
0.884
Solyc03g095980.2
Solanum lycopersicum
Solyc03g095980.2
I
0.884
chr2.CM0002.120.nc
Lotus japonicus
chr2.CM0002.120.nc
I
0.884
GLYMA11G35480
Glycine max
GLYMA11G35480
I
0.873
GLYMA18G02940
Glycine max
GLYMA18G02940
I
0.873
POPTR_0008s07090
Populus trichocarpa
POPTR_0008s07090
I
0.873
PRUPE_ppa010134mg
Prunus persica
PRUPE_ppa010134mg
I
0.873
TCM_042475
Theobroma cacao
TCM_042475
I
0.873
VIT_13s0067g01350
Vitis vinifera
VIT_13s0067g01350
I
0.873
Cla006707
Citrullus lanatus
Cla006707
I
0.873
Pm018950
Prunus mume
Pm018950
I
0.873
cassava37862.valid.m1
Manihot esculenta
cassava37862.valid.m1
I
0.873
Cucsa.136730
Cucumis sativus
Cucsa.136730
I
0.873
Ciclev10032356m.g
Citrus clementina
Ciclev10032356m.g
I
0.873
Eucgr.J00190
Eucalyptus grandis
Eucgr.J00190
I
0.873
evm.TU.supercontig_19.156
Carica papaya
evm.TU.supercontig_19.156
I
0.873
gene21000-v1.0-hybrid
Fragaria vesca
gene21000-v1.0-hybrid
I
0.873
Lus10007502.g
Linum usitatissimum
Lus10007502.g
I
0.873
Lus10028978.g
Linum usitatissimum
Lus10028978.g
I
0.873
orange1.1g023629m.g
Citrus sinensis
orange1.1g023629m.g
I
0.873
SapurV1A.0061s0470
Salix purpurea
SapurV1A.0061s0470
I
0.873
PK01630.1
Cannabis sativa
PK01630.1
D
0.873
POPTR_0010s19400
Populus trichocarpa
POPTR_0010s19400
I
0.870
PGSC0003DMG400015659
Solanum tuberosum
PGSC0003DMG400015659
I
0.858
GLYMA14G06330
Glycine max
GLYMA14G06330
N
0.852
MTR_3g070970
Medicago truncatula
MTR_3g070970
I
0.852
Ca_13402
Cicer arietinum
Ca_13402
I
0.852
29814.m000735
Ricinus communis
29814.m000735
I
0.852
Gorai.011G292100
Gossypium raimondii
Gorai.011G292100
I
0.852