CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA12G05930
(
Glycine max
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GLYMA12G05930
T039653_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.914
0.961
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.914
0.961
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN
NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.867
0.922
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA12G05930.2
bHLH
344
394
ATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQ
GLYMA12G05930.3
bHLH
344
394
ATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQ
Links
Other
bHLH
family TFs
Other
Glycine max
TFs
160 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29216.m000261
Ricinus communis
29216.m000261
I
0.879
30152.m002405
Ricinus communis
30152.m002405
I
0.877
Aquca_009_00280
Aquilegia coerulea
Aquca_009_00280
I
0.879
BGIOSGA008576
Oryza indica
BGIOSGA008576
I
0.851
BGIOSGA028963
Oryza indica
BGIOSGA028963
I
0.867
BGIOSGA031008
Oryza indica
BGIOSGA031008
I
0.867
BHLH122
Arabidopsis thaliana
AT1G51140
D
0.914
Bo4g015860
Brassica oleracea
Bo4g015860
I
0.856
Bo4g191390
Brassica oleracea
Bo4g191390
I
0.914
Bo6g024810
Brassica oleracea
Bo6g024810
I
0.914
Bostr.26675s0074
Boechera stricta
Bostr.26675s0074
I
0.914
Bra004678
Brassica rapa
Bra004678
I
0.856
Bra016886
Brassica rapa
Bra016886
I
0.914
Bra018896
Brassica rapa
Bra018896
I
0.914
BRADI3G39927
Brachypodium distachyon
BRADI3G39927
I
0.867
BRADI4G33670
Brachypodium distachyon
BRADI4G33670
I
0.844
Cagra.2093s0006
Capsella grandiflora
Cagra.2093s0006
I
0.914
Carubv10009458m.g
Capsella rubella
Carubv10009458m.g
I
0.914
cassava2126.valid.m1
Manihot esculenta
cassava2126.valid.m1
I
0.879
cassava29651.valid.m1
Manihot esculenta
cassava29651.valid.m1
I
0.877
cassava30692.valid.m1
Manihot esculenta
cassava30692.valid.m1
I
0.879
cassava35967.valid.m1
Manihot esculenta
cassava35967.valid.m1
I
0.879
cassava44054.valid.m1
Manihot esculenta
cassava44054.valid.m1
I
0.879
Ca_02662
Cicer arietinum
Ca_02662
I
0.914
Ca_14223
Cicer arietinum
Ca_14223
I
0.914
Ca_18899
Cicer arietinum
Ca_18899
I
0.856
Ciclev10005233m.g
Citrus clementina
Ciclev10005233m.g
I
0.879
Ciclev10015437m.g
Citrus clementina
Ciclev10015437m.g
I
0.914
Ciclev10031622m.g
Citrus clementina
Ciclev10031622m.g
I
0.850
Cla006394
Citrullus lanatus
Cla006394
I
0.856
Cla017792
Citrullus lanatus
Cla017792
I
0.879
Cucsa.143260
Cucumis sativus
Cucsa.143260
I
0.856
Cucsa.242910
Cucumis sativus
Cucsa.242910
I
0.879
Eucgr.A02417
Eucalyptus grandis
Eucgr.A02417
I
0.879
Eucgr.B03669
Eucalyptus grandis
Eucgr.B03669
I
0.914
Eucgr.J00796
Eucalyptus grandis
Eucgr.J00796
I
0.902
evm.TU.supercontig_84.89
Carica papaya
evm.TU.supercontig_84.89
I
0.879
evm.TU.supercontig_85.115
Carica papaya
evm.TU.supercontig_85.115
I
0.866
e_gw1.273.42.1
Physcomitrella patens
e_gw1.273.42.1
I
0.839
F775_24151
Aegilops tauschii
F775_24151
I
0.867
fgenesh1_pg.scaffold_155000050
Physcomitrella patens
fgenesh1_pg.scaffold_155000050
I
0.869
fgenesh2_kg.1__4183__AT1G51140.1
Arabidopsis lyrata
fgenesh2_kg.1__4183__AT1G51140.1
I
0.914
gene00545-v1.0-hybrid
Fragaria vesca
gene00545-v1.0-hybrid
I
0.879
gene20622-v1.0-hybrid
Fragaria vesca
gene20622-v1.0-hybrid
I
0.879
gene26967-v1.0-hybrid
Fragaria vesca
gene26967-v1.0-hybrid
I
0.850
GLYMA02G29830
Glycine max
GLYMA02G29830
I
0.849
GLYMA10G12150
Glycine max
GLYMA10G12150
I
0.879
GLYMA11G13960
Glycine max
GLYMA11G13960
I
0.914
GLYMA13G41670
Glycine max
GLYMA13G41670
I
0.914
GLYMA15G03740
Glycine max
GLYMA15G03740
I
0.914
Gorai.002G228900
Gossypium raimondii
Gorai.002G228900
I
0.879
Gorai.004G035800
Gossypium raimondii
Gorai.004G035800
I
0.855
Gorai.006G140200
Gossypium raimondii
Gorai.006G140200
I
0.879
Gorai.009G071900
Gossypium raimondii
Gorai.009G071900
I
0.914
GRMZM2G085467
Zea mays
GRMZM2G085467
I
0.902
GRMZM2G142932
Zea mays
GRMZM2G142932
I
0.844
GRMZM2G153454
Zea mays
GRMZM2G153454
I
0.844
GRMZM2G417597
Zea mays
GRMZM2G417597
I
0.902
GRMZM2G437481
Zea mays
GRMZM2G437481
I
0.851
GSMUA_Achr3G11110_001
Musa acuminata
GSMUA_Achr3G11110_001
I
0.902
GSMUA_Achr5G22310_001
Musa acuminata
GSMUA_Achr5G22310_001
I
0.879
GSMUA_Achr6G21220_001
Musa acuminata
GSMUA_Achr6G21220_001
I
0.840
GSMUA_Achr7G20490_001
Musa acuminata
GSMUA_Achr7G20490_001
I
0.868
GSMUA_Achr9G27780_001
Musa acuminata
GSMUA_Achr9G27780_001
I
0.914
gw1.185.89.1
Physcomitrella patens
gw1.185.89.1
I
0.845
LPERR02G18900
Leersia perrieri
LPERR02G18900
I
0.851
Lus10021023.g
Linum usitatissimum
Lus10021023.g
I
0.879
Lus10031255.g
Linum usitatissimum
Lus10031255.g
I
0.879
Lus10031826.g
Linum usitatissimum
Lus10031826.g
I
0.879
MDP0000180376
Malus domestica
MDP0000180376
I
0.879
mgf016092m
Mimulus guttatus
mgf016092m
I
0.856
mgf016734m
Mimulus guttatus
mgf016734m
I
0.879
MLOC_30102
Hordeum vulgare
MLOC_30102
I
0.844
MLOC_67834
Hordeum vulgare
MLOC_67834
I
0.867
MTR_1g052470
Medicago truncatula
MTR_1g052470
I
0.856
MTR_2g098310
Medicago truncatula
MTR_2g098310
I
0.914
MTR_4g065870
Medicago truncatula
MTR_4g065870
I
0.856
OB02G30670
Oryza brachyantha
OB02G30670
I
0.851
OB08G26810
Oryza brachyantha
OB08G26810
I
0.867
OBART02G23210
Oryza barthii
OBART02G23210
I
0.851
OBART08G19860
Oryza barthii
OBART08G19860
I
0.867
OBART09G14660
Oryza barthii
OBART09G14660
I
0.867
OGLUM08G21000
Oryza glumaepatula
OGLUM08G21000
I
0.867
OGLUM09G15300
Oryza glumaepatula
OGLUM09G15300
I
0.867
OLONG_009256
Oryza longistaminata
OLONG_009256
I
0.851
OLONG_017566
Oryza longistaminata
OLONG_017566
I
0.867
OMERI02G22740
Oryza meridionalis
OMERI02G22740
I
0.851
OMERI08G16700
Oryza meridionalis
OMERI08G16700
I
0.867
OMERI09G11370
Oryza meridionalis
OMERI09G11370
I
0.867
ONIVA02G26110
Oryza nivara
ONIVA02G26110
I
0.851
ONIVA08G17500
Oryza nivara
ONIVA08G17500
I
0.867
ONIVA08G22410
Oryza nivara
ONIVA08G22410
I
0.867
OPUNC02G21170
Oryza punctata
OPUNC02G21170
I
0.851
OPUNC08G18020
Oryza punctata
OPUNC08G18020
I
0.867
OPUNC09G13060
Oryza punctata
OPUNC09G13060
I
0.867
orange1.1g015337m.g
Citrus sinensis
orange1.1g015337m.g
I
0.914
orange1.1g016638m.g
Citrus sinensis
orange1.1g016638m.g
I
0.850
orange1.1g018007m.g
Citrus sinensis
orange1.1g018007m.g
I
0.879
ORGLA02G0200100
Oryza glaberrima
ORGLA02G0200100
I
0.851
ORGLA08G0174800
Oryza glaberrima
ORGLA08G0174800
I
0.867
ORGLA09G0112900
Oryza glaberrima
ORGLA09G0112900
I
0.867
ORUFI02G24640
Oryza rufipogon
ORUFI02G24640
I
0.851
ORUFI08G22260
Oryza rufipogon
ORUFI08G22260
I
0.867
ORUFI09G15820
Oryza rufipogon
ORUFI09G15820
I
0.867
OS08G0506700
Oryza sativa
OS08G0506700
D
0.867
OS09G0487900
Oryza sativa
OS09G0487900
I
0.867
Pavir.Aa01423
Panicum virgatum
Pavir.Aa01423
I
0.840
Pavir.Ab02229
Panicum virgatum
Pavir.Ab02229
I
0.851
Pavir.Ba00676
Panicum virgatum
Pavir.Ba00676
I
0.844
Pavir.Ba01718
Panicum virgatum
Pavir.Ba01718
I
0.902
Pavir.Bb03157
Panicum virgatum
Pavir.Bb03157
I
0.844
Pavir.Fa00493
Panicum virgatum
Pavir.Fa00493
I
0.844
Pavir.Ga01365
Panicum virgatum
Pavir.Ga01365
I
0.851
Pavir.Gb01377
Panicum virgatum
Pavir.Gb01377
I
0.851
Pavir.J00377
Panicum virgatum
Pavir.J00377
I
0.902
Pavir.J08536
Panicum virgatum
Pavir.J08536
I
0.851
Pavir.J14004
Panicum virgatum
Pavir.J14004
I
0.902
Pavir.J25484
Panicum virgatum
Pavir.J25484
I
0.844
PDK_20s1302565g001
Phoenix dactylifera
PDK_20s1302565g001
I
0.893
PDK_20s1391471g001
Phoenix dactylifera
PDK_20s1391471g001
I
0.879
PDK_20s1484071g001
Phoenix dactylifera
PDK_20s1484071g001
I
0.864
PDK_20s1630671g001
Phoenix dactylifera
PDK_20s1630671g001
I
0.864
PGSC0003DMG400008153
Solanum tuberosum
PGSC0003DMG400008153
I
0.879
PGSC0003DMG400025263
Solanum tuberosum
PGSC0003DMG400025263
I
0.877
PK18038.1
Cannabis sativa
PK18038.1
I
0.879
PK20089.1
Cannabis sativa
PK20089.1
I
0.914
Pm000447
Prunus mume
Pm000447
I
0.879
Pm025821
Prunus mume
Pm025821
I
0.879
POPTR_0006s05640
Populus trichocarpa
POPTR_0006s05640
I
0.879
POPTR_0009s06910
Populus trichocarpa
POPTR_0009s06910
I
0.877
POPTR_0016s05100
Populus trichocarpa
POPTR_0016s05100
I
0.879
PRUPE_ppa006295mg
Prunus persica
PRUPE_ppa006295mg
I
0.879
PRUPE_ppa019977mg
Prunus persica
PRUPE_ppa019977mg
I
0.879
SapurV1A.0018s0320
Salix purpurea
SapurV1A.0018s0320
I
0.879
SapurV1A.0027s0090
Salix purpurea
SapurV1A.0027s0090
I
0.847
SapurV1A.0111s0030
Salix purpurea
SapurV1A.0111s0030
I
0.864
SapurV1A.0133s0050
Salix purpurea
SapurV1A.0133s0050
I
0.879
SapurV1A.1898s0040
Salix purpurea
SapurV1A.1898s0040
I
0.864
Sb02g028300
Sorghum bicolor
Sb02g028300
I
0.902
Sb04g025260
Sorghum bicolor
Sb04g025260
I
0.851
Sb06g020810
Sorghum bicolor
Sb06g020810
I
0.851
Sb07g027810
Sorghum bicolor
Sb07g027810
I
0.844
SELMODRAFT_402301
Selaginella moellendorffii
SELMODRAFT_402301
I
0.843
Si010513m.g
Setaria italica
Si010513m.g
I
0.851
Si013950m.g
Setaria italica
Si013950m.g
I
0.844
Si029614m.g
Setaria italica
Si029614m.g
I
0.902
Si030166m.g
Setaria italica
Si030166m.g
I
0.844
Solyc01g086870.2
Solanum lycopersicum
Solyc01g086870.2
I
0.877
Solyc10g079050.1
Solanum lycopersicum
Solyc10g079050.1
I
0.879
TCM_005925
Theobroma cacao
TCM_005925
I
0.855
TCM_024842
Theobroma cacao
TCM_024842
I
0.879
TCM_040564
Theobroma cacao
TCM_040564
I
0.914
Thhalv10011463m.g
Eutrema salsugineum
Thhalv10011463m.g
I
0.914
Traes_5BL_4317E525B
Triticum aestivum
Traes_5BL_4317E525B
I
0.844
Traes_7AS_4FAB72487
Triticum aestivum
Traes_7AS_4FAB72487
I
0.867
Traes_7DS_B671A4EAD
Triticum aestivum
Traes_7DS_B671A4EAD
I
0.867
TRIUR3_26625
Triticum urartu
TRIUR3_26625
I
0.867
VIT_08s0007g07810
Vitis vinifera
VIT_08s0007g07810
I
0.879
VIT_13s0064g01290
Vitis vinifera
VIT_13s0064g01290
I
0.877