CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G038479
(
Zea mays
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GRMZM2G038479
T039833_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK09702.1
M01124_2.00
Cannabis sativa
GCACGTGV
BCACGTGC
PBM
Lambert et al.(2019)
pTH11374
0.840
0.583
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G038479_P01
bHLH
110
157
ISHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELR
Links
Other
bHLH
family TFs
Other
Zea mays
TFs
132 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29647.m002101
Ricinus communis
29647.m002101
I
0.840
29827.m002528
Ricinus communis
29827.m002528
I
0.840
AMTR_s00002p00225810
Amborella trichopoda
AMTR_s00002p00225810
I
0.840
AMTR_s00025p00048410
Amborella trichopoda
AMTR_s00025p00048410
I
0.840
Aquca_026_00421
Aquilegia coerulea
Aquca_026_00421
I
0.840
Aquca_054_00130
Aquilegia coerulea
Aquca_054_00130
I
0.840
BGIOSGA026551
Oryza indica
BGIOSGA026551
I
0.903
BGIOSGA029426
Oryza indica
BGIOSGA029426
I
0.914
BGIOSGA033493
Oryza indica
BGIOSGA033493
I
0.840
BRADI1G54070
Brachypodium distachyon
BRADI1G54070
I
0.840
BRADI3G34200
Brachypodium distachyon
BRADI3G34200
I
0.840
BRADI3G41930
Brachypodium distachyon
BRADI3G41930
N
0.844
BRADI3G41950
Brachypodium distachyon
BRADI3G41950
N
0.865
BRADI4G35400
Brachypodium distachyon
BRADI4G35400
N
0.890
cassava24625.valid.m1
Manihot esculenta
cassava24625.valid.m1
I
0.840
cassava29522.valid.m1
Manihot esculenta
cassava29522.valid.m1
I
0.840
cassava45205.m1
Manihot esculenta
cassava45205.m1
I
0.840
cassava8764.m1
Manihot esculenta
cassava8764.m1
I
0.840
Ca_07836
Cicer arietinum
Ca_07836
I
0.840
Ciclev10011214m.g
Citrus clementina
Ciclev10011214m.g
I
0.840
Ciclev10019118m.g
Citrus clementina
Ciclev10019118m.g
I
0.840
Cla016454
Citrullus lanatus
Cla016454
I
0.840
Cucsa.313090
Cucumis sativus
Cucsa.313090
I
0.840
Eucgr.H01487
Eucalyptus grandis
Eucgr.H01487
I
0.840
evm.TU.supercontig_71.72
Carica papaya
evm.TU.supercontig_71.72
I
0.840
F775_01879
Aegilops tauschii
F775_01879
N
0.860
F775_42459
Aegilops tauschii
F775_42459
N
0.856
gene27827-v1.0-hybrid
Fragaria vesca
gene27827-v1.0-hybrid
I
0.840
GLYMA02G16670
Glycine max
GLYMA02G16670
I
0.840
GLYMA03G30940
Glycine max
GLYMA03G30940
I
0.852
GLYMA10G03140
Glycine max
GLYMA10G03140
I
0.840
Gorai.004G129600
Gossypium raimondii
Gorai.004G129600
I
0.870
Gorai.004G215900
Gossypium raimondii
Gorai.004G215900
I
0.840
Gorai.007G136400
Gossypium raimondii
Gorai.007G136400
I
0.840
GRMZM2G001930
Zea mays
GRMZM2G001930
I
0.840
GRMZM2G013688
Zea mays
GRMZM2G013688
I
0.914
GRMZM2G049229
Zea mays
GRMZM2G049229
I
0.840
GRMZM2G107560
Zea mays
GRMZM2G107560
I
0.914
GRMZM2G472671
Zea mays
GRMZM2G472671
N
0.890
GSMUA_Achr11G17840_001
Musa acuminata
GSMUA_Achr11G17840_001
I
0.840
GSMUA_Achr2G18140_001
Musa acuminata
GSMUA_Achr2G18140_001
I
0.840
GSMUA_Achr3G17620_001
Musa acuminata
GSMUA_Achr3G17620_001
I
0.840
GSMUA_Achr4G16980_001
Musa acuminata
GSMUA_Achr4G16980_001
I
0.840
GSMUA_Achr6G21490_001
Musa acuminata
GSMUA_Achr6G21490_001
I
0.840
GSMUA_Achr7G04720_001
Musa acuminata
GSMUA_Achr7G04720_001
I
0.840
GSMUA_Achr8G14720_001
Musa acuminata
GSMUA_Achr8G14720_001
I
0.840
GSMUA_AchrUn_randomG02900_001
Musa acuminata
GSMUA_AchrUn_randomG02900_001
I
0.840
LPERR03G22350
Leersia perrieri
LPERR03G22350
I
0.903
LPERR08G19100
Leersia perrieri
LPERR08G19100
I
0.884
LPERR09G12780
Leersia perrieri
LPERR09G12780
I
0.914
LPERR10G15300
Leersia perrieri
LPERR10G15300
I
0.840
Lus10005999.g
Linum usitatissimum
Lus10005999.g
I
0.852
Lus10030970.g
Linum usitatissimum
Lus10030970.g
I
0.840
MDP0000160600
Malus domestica
MDP0000160600
I
0.849
MDP0000225680
Malus domestica
MDP0000225680
I
0.840
MDP0000617077
Malus domestica
MDP0000617077
I
0.840
MLOC_40535
Hordeum vulgare
MLOC_40535
N
0.879
MLOC_71611
Hordeum vulgare
MLOC_71611
I
0.840
MTR_1g072320
Medicago truncatula
MTR_1g072320
I
0.840
MYC2
Oryza sativa
OS10G0575000
I
0.840
OGLUM08G23650
Oryza glumaepatula
OGLUM08G23650
I
0.903
OGLUM09G17250
Oryza glumaepatula
OGLUM09G17250
I
0.914
OGLUM10G19510
Oryza glumaepatula
OGLUM10G19510
I
0.840
OLONG_011820
Oryza longistaminata
OLONG_011820
I
0.840
OMERI08G17270
Oryza meridionalis
OMERI08G17270
I
0.903
ONIVA08G25370
Oryza nivara
ONIVA08G25370
I
0.903
ONIVA09G17720
Oryza nivara
ONIVA09G17720
I
0.914
ONIVA10G22030
Oryza nivara
ONIVA10G22030
I
0.840
OPUNC10G17860
Oryza punctata
OPUNC10G17860
I
0.840
orange1.1g005651m.g
Citrus sinensis
orange1.1g005651m.g
I
0.840
orange1.1g037798m.g
Citrus sinensis
orange1.1g037798m.g
I
0.840
ORGLA08G0221300
Oryza glaberrima
ORGLA08G0221300
I
0.903
ORGLA09G0131400
Oryza glaberrima
ORGLA09G0131400
I
0.914
ORGLA10G0146100
Oryza glaberrima
ORGLA10G0146100
I
0.840
ORUFI08G24840
Oryza rufipogon
ORUFI08G24840
I
0.903
ORUFI09G17940
Oryza rufipogon
ORUFI09G17940
I
0.914
ORUFI10G20700
Oryza rufipogon
ORUFI10G20700
I
0.840
OS08G0543700
Oryza sativa
OS08G0543700
I
0.903
OS09G0519100
Oryza sativa
OS09G0519100
I
0.914
Pavir.Ba01305
Panicum virgatum
Pavir.Ba01305
I
0.914
Pavir.Ba01307
Panicum virgatum
Pavir.Ba01307
I
0.914
Pavir.Fa00118
Panicum virgatum
Pavir.Fa00118
N
0.887
Pavir.Fb00905
Panicum virgatum
Pavir.Fb00905
N
0.887
Pavir.Fb02191
Panicum virgatum
Pavir.Fb02191
N
0.890
Pavir.Ia03512
Panicum virgatum
Pavir.Ia03512
I
0.840
Pavir.J01049
Panicum virgatum
Pavir.J01049
I
0.914
Pavir.J19529
Panicum virgatum
Pavir.J19529
N
0.858
Pavir.J27331
Panicum virgatum
Pavir.J27331
N
0.879
Pavir.J28686
Panicum virgatum
Pavir.J28686
I
0.840
Pavir.J38781
Panicum virgatum
Pavir.J38781
I
0.840
Pavir.J40111
Panicum virgatum
Pavir.J40111
I
0.914
PGSC0003DMG400012891
Solanum tuberosum
PGSC0003DMG400012891
I
0.840
PK09702.1
Cannabis sativa
PK09702.1
D
0.840
Pm020164
Prunus mume
Pm020164
I
0.840
POPTR_0001s02450
Populus trichocarpa
POPTR_0001s02450
I
0.840
POPTR_0005s23020
Populus trichocarpa
POPTR_0005s23020
I
0.840
PRUPE_ppa002884m2g
Prunus persica
PRUPE_ppa002884m2g
I
0.840
SapurV1A.0076s0350
Salix purpurea
SapurV1A.0076s0350
I
0.840
SapurV1A.0741s0050
Salix purpurea
SapurV1A.0741s0050
I
0.840
Sb01g028230
Sorghum bicolor
Sb01g028230
I
0.840
Sb02g006390
Sorghum bicolor
Sb02g006390
I
0.840
Sb02g030110
Sorghum bicolor
Sb02g030110
I
0.914
Sb02g030120
Sorghum bicolor
Sb02g030120
I
0.914
Sb07g025310
Sorghum bicolor
Sb07g025310
I
0.903
Sb07g025330
Sorghum bicolor
Sb07g025330
N
0.890
Sb07g025340
Sorghum bicolor
Sb07g025340
N
0.876
Sb2273s002010
Sorghum bicolor
Sb2273s002010
N
0.869
Si014241m.g
Setaria italica
Si014241m.g
N
0.849
Si015024m.g
Setaria italica
Si015024m.g
N
0.890
Si015026m.g
Setaria italica
Si015026m.g
N
0.890
Si015072m.g
Setaria italica
Si015072m.g
N
0.842
Si015213m.g
Setaria italica
Si015213m.g
N
0.849
Si015343m.g
Setaria italica
Si015343m.g
N
0.890
Si015513m.g
Setaria italica
Si015513m.g
I
0.914
Si029106m.g
Setaria italica
Si029106m.g
I
0.840
Si031900m.g
Setaria italica
Si031900m.g
I
0.914
Si032741m.g
Setaria italica
Si032741m.g
I
0.914
Si039973m.g
Setaria italica
Si039973m.g
I
0.840
Solyc09g065100.1
Solanum lycopersicum
Solyc09g065100.1
I
0.840
TCM_004403
Theobroma cacao
TCM_004403
I
0.840
TCM_015714
Theobroma cacao
TCM_015714
I
0.840
Thhalv10028584m.g
Eutrema salsugineum
Thhalv10028584m.g
I
0.840
Traes_2BL_F38E03233
Triticum aestivum
Traes_2BL_F38E03233
N
0.849
Traes_2BL_F38E032331
Triticum aestivum
Traes_2BL_F38E032331
N
0.849
Traes_5BL_C753673FD
Triticum aestivum
Traes_5BL_C753673FD
N
0.890
Traes_5BL_D45BBFEBC
Triticum aestivum
Traes_5BL_D45BBFEBC
N
0.849
Traes_5BL_E86F89671
Triticum aestivum
Traes_5BL_E86F89671
N
0.890
Traes_5DL_5DA6E1A09
Triticum aestivum
Traes_5DL_5DA6E1A09
N
0.890
Traes_5DL_F32936F9C
Triticum aestivum
Traes_5DL_F32936F9C
N
0.890
TRIUR3_29141
Triticum urartu
TRIUR3_29141
N
0.849
TT8
Vitis vinifera
VIT_07s0104g00090
I
0.840
VIT_02s0012g01320
Vitis vinifera
VIT_02s0012g01320
I
0.840