MTR_3g028520 (Medicago truncatula)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 MTR_3g028520 T041625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0506700
M01755_2.00 		Oryza sativa
NCCACTTGN
NCAAGTGGN		 PBM
Weirauch et al.(2014)
pTH8547 		0.849 0.837
BHLH80
M06722_2.00 		Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH80_col_a 		0.848 0.776
BHLH80
M06723_2.00 		Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH		 Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a 		0.848 0.776
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH33213 bHLH 331 379

Links

Other bHLH family TFs
Other Medicago truncatula TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_3g027650 Medicago truncatula MTR_3g027650 I 0.914
GLYMA08G16190 Glycine max GLYMA08G16190 I 0.894
GLYMA12G36750 Glycine max GLYMA12G36750 I 0.894
GLYMA13G27455 Glycine max GLYMA13G27455 I 0.894
Ca_26916 Cicer arietinum Ca_26916 I 0.881
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.867
Cucsa.050160 Cucumis sativus Cucsa.050160 I 0.864
Cla015469 Citrullus lanatus Cla015469 I 0.852
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.852
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.852
chr3.LjT46L11.40.nc Lotus japonicus chr3.LjT46L11.40.nc N 0.852
GLYMA15G42680 Glycine max GLYMA15G42680 I 0.851
30149.m000231 Ricinus communis 30149.m000231 I 0.850
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I 0.850
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.850
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.849
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.849
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.849
F775_24151 Aegilops tauschii F775_24151 I 0.849
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.849
OB08G26810 Oryza brachyantha OB08G26810 I 0.849
OBART08G19860 Oryza barthii OBART08G19860 I 0.849
OBART09G14660 Oryza barthii OBART09G14660 I 0.849
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.849
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.849
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.849
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.849
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.849
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.849
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.849
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.849
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.849
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.849
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.849
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.849
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.849
OS08G0506700 Oryza sativa OS08G0506700 D 0.849
OS09G0487900 Oryza sativa OS09G0487900 I 0.849
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.849
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.849
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.849
BHLH80 Arabidopsis thaliana AT1G35460 D 0.848
BHLH81 Arabidopsis thaliana AT4G09180 I 0.848
Bo6g043840 Brassica oleracea Bo6g043840 I 0.848
Bo8g026850 Brassica oleracea Bo8g026850 I 0.848
Bra028088 Brassica rapa Bra028088 I 0.848
Bra036760 Brassica rapa Bra036760 I 0.848
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.848
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.848
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.848
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.848
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.848
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.848
TCM_036484 Theobroma cacao TCM_036484 I 0.848
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.848
Pm004181 Prunus mume Pm004181 I 0.848
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.848
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.848
mgf002701m Mimulus guttatus mgf002701m I 0.848
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.848
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.848
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.848
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.848
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.848
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.848
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.848
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.848
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.848
MDP0000269890 Malus domestica MDP0000269890 I 0.848
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.848
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.848
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.848
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.848
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.848
PK06301.1 Cannabis sativa PK06301.1 I 0.848
AT2G43140 Arabidopsis thaliana AT2G43140 I 0.846
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.846
Bo3g036400 Brassica oleracea Bo3g036400 I 0.846
Bo4g019620 Brassica oleracea Bo4g019620 I 0.846
Bra000291 Brassica rapa Bra000291 I 0.846
Bra004748 Brassica rapa Bra004748 I 0.846
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I 0.846
GLYMA20G39220 Glycine max GLYMA20G39220 I 0.846
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.846
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.846
OB02G30670 Oryza brachyantha OB02G30670 I 0.846
OBART02G23210 Oryza barthii OBART02G23210 I 0.846
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.846
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.846
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.846
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.846
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.846
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.846
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I 0.846
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I 0.846
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.846
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.846
Si010513m.g Setaria italica Si010513m.g I 0.846
Si017194m.g Setaria italica Si017194m.g I 0.846
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I 0.846
TCM_020066 Theobroma cacao TCM_020066 I 0.846
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I 0.846
Pm007619 Prunus mume Pm007619 I 0.846
mgf005043m Mimulus guttatus mgf005043m I 0.846
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I 0.846
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I 0.846
Carubv10023683m.g Capsella rubella Carubv10023683m.g I 0.846
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I 0.846
MDP0000273574 Malus domestica MDP0000273574 I 0.846
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.846
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.846
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.846
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.846
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I 0.846
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I 0.846
PK07850.1 Cannabis sativa PK07850.1 I 0.846
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I 0.846
POPTR_0001s27680 Populus trichocarpa POPTR_0001s27680 I 0.841
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.839
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.839
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.839
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.839
30152.m002405 Ricinus communis 30152.m002405 I 0.839
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.839
SapurV1A.0027s0090 Salix purpurea SapurV1A.0027s0090 I 0.839