CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_5g066080
(
Medicago truncatula
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
MTR_5g066080
T041684_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES98240
bHLH
37
86
ACKSHREAERRRRQRINAHLNTLRSLLPNTTKSDKASLLAEVVQHVKRLK
Links
Other
bHLH
family TFs
Other
Medicago truncatula
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_14981
Cicer arietinum
Ca_14981
N
0.914
BRADI4G29990
Brachypodium distachyon
BRADI4G29990
N
0.890
LPERR08G12910
Leersia perrieri
LPERR08G12910
I
0.890
Gorai.009G230000
Gossypium raimondii
Gorai.009G230000
N
0.890
VIT_18s0001g07410
Vitis vinifera
VIT_18s0001g07410
N
0.877
cassava34286.m1
Manihot esculenta
cassava34286.m1
N
0.877
PK01498.1
Cannabis sativa
PK01498.1
N
0.877
BGIOSGA026937
Oryza indica
BGIOSGA026937
I
0.870
BGIOSGA029777
Oryza indica
BGIOSGA029777
I
0.870
GLYMA02G37720
Glycine max
GLYMA02G37720
N
0.870
GLYMA14G36010
Glycine max
GLYMA14G36010
N
0.870
GRMZM2G107276
Zea mays
GRMZM2G107276
I
0.870
GRMZM2G176141
Zea mays
GRMZM2G176141
N
0.870
GRMZM2G526668
Zea mays
GRMZM2G526668
I
0.870
LPERR09G06880
Leersia perrieri
LPERR09G06880
I
0.870
MLOC_12832
Hordeum vulgare
MLOC_12832
N
0.870
OBART08G15650
Oryza barthii
OBART08G15650
I
0.870
OGLUM08G16400
Oryza glumaepatula
OGLUM08G16400
I
0.870
OMERI08G12930
Oryza meridionalis
OMERI08G12930
I
0.870
OMERI09G07780
Oryza meridionalis
OMERI09G07780
I
0.870
ONIVA08G16750
Oryza nivara
ONIVA08G16750
I
0.870
ONIVA09G09550
Oryza nivara
ONIVA09G09550
I
0.870
OPUNC08G13730
Oryza punctata
OPUNC08G13730
I
0.870
ORGLA08G0137400
Oryza glaberrima
ORGLA08G0137400
I
0.870
ORUFI08G17560
Oryza rufipogon
ORUFI08G17560
I
0.870
ORUFI09G10670
Oryza rufipogon
ORUFI09G10670
I
0.870
OS08G0432800
Oryza sativa
OS08G0432800
I
0.870
OS09G0410700
Oryza sativa
OS09G0410700
I
0.870
Sb02g024460
Sorghum bicolor
Sb02g024460
N
0.870
Sb07g021170
Sorghum bicolor
Sb07g021170
I
0.870
Si013911m.g
Setaria italica
Si013911m.g
I
0.870
Si030496m.g
Setaria italica
Si030496m.g
N
0.870
Traes_5BL_CF90A7CAE
Triticum aestivum
Traes_5BL_CF90A7CAE
N
0.870
BRADI1G67500
Brachypodium distachyon
BRADI1G67500
I
0.866
GRMZM2G043854
Zea mays
GRMZM2G043854
I
0.866
LPERR03G10060
Leersia perrieri
LPERR03G10060
I
0.866
OB03G21490
Oryza brachyantha
OB03G21490
I
0.866
OBART03G11320
Oryza barthii
OBART03G11320
I
0.866
OGLUM03G11280
Oryza glumaepatula
OGLUM03G11280
I
0.866
OLONG_004075
Oryza longistaminata
OLONG_004075
I
0.866
ONIVA03G12280
Oryza nivara
ONIVA03G12280
I
0.866
ORGLA03G0109100
Oryza glaberrima
ORGLA03G0109100
I
0.866
ORUFI03G11650
Oryza rufipogon
ORUFI03G11650
I
0.866
OS03G0260600
Oryza sativa
OS03G0260600
I
0.866
Sb01g040450
Sorghum bicolor
Sb01g040450
I
0.866
Si039730m.g
Setaria italica
Si039730m.g
I
0.866
Pavir.Ib01099
Panicum virgatum
Pavir.Ib01099
I
0.866
MDP0000562627
Malus domestica
MDP0000562627
N
0.865
Pavir.Ba01821
Panicum virgatum
Pavir.Ba01821
N
0.858
Pavir.Bb02155
Panicum virgatum
Pavir.Bb02155
N
0.858
AMTR_s00002p00019320
Amborella trichopoda
AMTR_s00002p00019320
I
0.857
PGSC0003DMG400023577
Solanum tuberosum
PGSC0003DMG400023577
N
0.857
Solyc04g014360.2
Solanum lycopersicum
Solyc04g014360.2
N
0.857
Cla022500
Citrullus lanatus
Cla022500
N
0.857
Cucsa.160650
Cucumis sativus
Cucsa.160650
N
0.857
Aquca_007_00571
Aquilegia coerulea
Aquca_007_00571
N
0.857
Ciclev10002205m.g
Citrus clementina
Ciclev10002205m.g
N
0.857
orange1.1g024930m.g
Citrus sinensis
orange1.1g024930m.g
N
0.857
GSMUA_Achr5G29390_001
Musa acuminata
GSMUA_Achr5G29390_001
N
0.854
SapurV1A.0004s1200
Salix purpurea
SapurV1A.0004s1200
N
0.850
SapurV1A.3655s0010
Salix purpurea
SapurV1A.3655s0010
N
0.850
OLONG_011765
Oryza longistaminata
OLONG_011765
N
0.848
29908.m006255
Ricinus communis
29908.m006255
N
0.847
AMTR_s00010p00144270
Amborella trichopoda
AMTR_s00010p00144270
I
0.846
BHLH30
Arabidopsis thaliana
AT1G68810
I
0.846
BHLH32
Arabidopsis thaliana
AT3G25710
I
0.846
Bo2g138630
Brassica oleracea
Bo2g138630
I
0.846
Bo6g108270
Brassica oleracea
Bo6g108270
I
0.846
Bo7g081980
Brassica oleracea
Bo7g081980
I
0.846
Bra004015
Brassica rapa
Bra004015
I
0.846
Bra004338
Brassica rapa
Bra004338
I
0.846
Bra025158
Brassica rapa
Bra025158
I
0.846
Bra026510
Brassica rapa
Bra026510
I
0.846
F775_10096
Aegilops tauschii
F775_10096
I
0.846
fgenesh2_kg.2__1138__AT1G68810.1
Arabidopsis lyrata
fgenesh2_kg.2__1138__AT1G68810.1
I
0.846
BHLH32
Arabidopsis lyrata
fgenesh2_kg.5__324__AT3G25710.1
I
0.846
GLYMA01G22530
Glycine max
GLYMA01G22530
I
0.846
GLYMA02G11190
Glycine max
GLYMA02G11190
I
0.846
GSMUA_Achr6G30610_001
Musa acuminata
GSMUA_Achr6G30610_001
I
0.846
GSMUA_Achr7G07280_001
Musa acuminata
GSMUA_Achr7G07280_001
I
0.846
MLOC_66385
Hordeum vulgare
MLOC_66385
I
0.846
PGSC0003DMG400000824
Solanum tuberosum
PGSC0003DMG400000824
I
0.846
SELMODRAFT_412681
Selaginella moellendorffii
SELMODRAFT_412681
I
0.846
SELMODRAFT_417246
Selaginella moellendorffii
SELMODRAFT_417246
I
0.846
Solyc04g006990.2
Solanum lycopersicum
Solyc04g006990.2
I
0.846
Solyc05g009880.2
Solanum lycopersicum
Solyc05g009880.2
I
0.846
Traes_4AS_DD16F89E7
Triticum aestivum
Traes_4AS_DD16F89E7
I
0.846
Traes_4BL_A2B32FCEE
Triticum aestivum
Traes_4BL_A2B32FCEE
I
0.846
Traes_4DL_7BD3165FB
Triticum aestivum
Traes_4DL_7BD3165FB
I
0.846
TRIUR3_31897
Triticum urartu
TRIUR3_31897
I
0.846
Ca_24775
Cicer arietinum
Ca_24775
I
0.846
Cla000223
Citrullus lanatus
Cla000223
I
0.846
Bostr.0556s0241
Boechera stricta
Bostr.0556s0241
I
0.846
Bostr.26959s0001
Boechera stricta
Bostr.26959s0001
I
0.846
Cagra.0417s0002
Capsella grandiflora
Cagra.0417s0002
I
0.846
Cagra.1157s0003
Capsella grandiflora
Cagra.1157s0003
I
0.846
Carubv10017470m.g
Capsella rubella
Carubv10017470m.g
I
0.846
Carubv10020515m.g
Capsella rubella
Carubv10020515m.g
I
0.846
Lus10034271.g
Linum usitatissimum
Lus10034271.g
I
0.846
Lus10041493.g
Linum usitatissimum
Lus10041493.g
I
0.846
Thhalv10004524m.g
Eutrema salsugineum
Thhalv10004524m.g
I
0.846
Thhalv10018758m.g
Eutrema salsugineum
Thhalv10018758m.g
I
0.846
chr2.CM0749.390.nc
Lotus japonicus
chr2.CM0749.390.nc
I
0.846
MTR_4g079760
Medicago truncatula
MTR_4g079760
N
0.845
OGLUM09G10310
Oryza glumaepatula
OGLUM09G10310
N
0.845
VIT_12s0028g02350
Vitis vinifera
VIT_12s0028g02350
N
0.845
evm.TU.supercontig_21.7
Carica papaya
evm.TU.supercontig_21.7
N
0.845
PRUPE_ppa026166mg
Prunus persica
PRUPE_ppa026166mg
N
0.844
Al_scaffold_0007_233
Arabidopsis lyrata
Al_scaffold_0007_233
N
0.842
BHLH131
Arabidopsis thaliana
AT4G38070
N
0.842
Bra010635
Brassica rapa
Bra010635
N
0.842
BRADI3G36610
Brachypodium distachyon
BRADI3G36610
N
0.842
PGSC0003DMG400010208
Solanum tuberosum
PGSC0003DMG400010208
I
0.842
PRUPE_ppa019545mg
Prunus persica
PRUPE_ppa019545mg
N
0.842
Solyc02g076920.2
Solanum lycopersicum
Solyc02g076920.2
I
0.842
Pm002160
Prunus mume
Pm002160
N
0.842
Bostr.25542s0212
Boechera stricta
Bostr.25542s0212
N
0.842
Cagra.5414s0046
Capsella grandiflora
Cagra.5414s0046
N
0.842
Carubv10003996m.g
Capsella rubella
Carubv10003996m.g
N
0.842
gene20797-v1.0-hybrid
Fragaria vesca
gene20797-v1.0-hybrid
N
0.842
Gorai.007G059100
Gossypium raimondii
Gorai.007G059100
N
0.842
Thhalv10027500m.g
Eutrema salsugineum
Thhalv10027500m.g
N
0.842