CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_8g024790
(
Medicago truncatula
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
MTR_8g024790
T041715_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.883
0.875
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN
NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.883
0.875
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK
MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.883
0.875
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.883
0.854
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.883
0.833
BHLH14
M09785_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT4G00870_01
0.871
0.792
BHLH13
M01698_2.00
Arabidopsis thaliana
MCACGTGV
BCACGTGK
PBM
Weirauch et al.(2014)
pTH7565
0.870
0.875
OS01G0235700
M09894_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BHLH66_01
0.859
0.792
BHLH28
M06742_2.00
Arabidopsis thaliana
NNNYGTACGGAH
DTCCGTACRNNN
Dap-seq
OMalley et al.(2016)
bHLH28_col_a
0.856
0.875
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH18600
bHLH
290
337
MNHVEAERQRREKLNHRFYALRSVVPNVSKMDKASLLSDAVDYINELK
Links
Other
bHLH
family TFs
Other
Medicago truncatula
TFs
362 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL003646
Aedes aegypti
AAEL003646
N
AALB009601
Anopheles albimanus
AALB009601
N
Aan_R004874
Calypte anna
Aan_R004874
I
Aan_R008906
Calypte anna
Aan_R008906
I
AARA001918
Anopheles arabiensis
AARA001918
N
AATE017814
Anopheles atroparvus
AATE017814
N
ACEP17596
Atta cephalotes
ACEP17596
N
ACHR001142
Anopheles christyi
ACHR001142
N
ACOM034184
Anopheles coluzzii
ACOM034184
N
ACUA005063
Anopheles culicifacies
ACUA005063
N
ACYPI005068
Acyrthosiphon pisum
ACYPI005068
I
ADAC009685
Anopheles darlingi
ADAC009685
N
ADIR004482
Anopheles dirus
ADIR004482
N
AEPI006229
Anopheles epiroticus
AEPI006229
N
AFAF007309
Anopheles farauti
AFAF007309
N
Afo_R002309
Aptenodytes forsteri
Afo_R002309
I
Afo_R012529
Aptenodytes forsteri
Afo_R012529
I
AFUN004803
Anopheles funestus
AFUN004803
N
AGAP001464
Anopheles gambiae
AGAP001464
N
Alligator_sinensis_CCG001816.1
Alligator sinensis
Alligator_sinensis_CCG001816.1
I
Alligator_sinensis_CCG003243.1
Alligator sinensis
Alligator_sinensis_CCG003243.1
I
Alligator_sinensis_CCG015693.1
Alligator sinensis
Alligator_sinensis_CCG015693.1
I
Alligator_sinensis_CCG015770.1
Alligator sinensis
Alligator_sinensis_CCG015770.1
I
AMAM004382
Anopheles maculatus
AMAM004382
N
AMEC006548
Anopheles melas
AMEC006548
N
AMEC006894
Anopheles melas
AMEC006894
N
AMEM002225
Anopheles merus
AMEM002225
N
AMIN002152
Anopheles minimus
AMIN002152
N
AQUA006648
Anopheles quadriannulatus
AQUA006648
N
ASIS007002
Anopheles sinensis
ASIS007002
N
ASTEI05750
Anopheles stephensi
ASTEI05750
N
A_06545
Schistosoma haematobium
A_06545
I
Brh_R001055
Buceros rhinoceros
Brh_R001055
I
CapteG223373
Capitella teleta
CapteG223373
I
Cflo_00951--XP_393982.2_APIME
Camponotus floridanus
Cflo_00951--XP_393982.2_APIME
I
Cflo_08743--XP_393982.2_APIME
Camponotus floridanus
Cflo_08743--XP_393982.2_APIME
N
CGI_10026447
Crassostrea gigas
CGI_10026447
I
CGI_10028896
Crassostrea gigas
CGI_10028896
I
CLEC003521
Cimex lectularius
CLEC003521
I
CLEC006285
Cimex lectularius
CLEC006285
N
Cmyd_10004342
Chelonia mydas
Cmyd_10004342
I
Cmyd_10012869
Chelonia mydas
Cmyd_10012869
I
creb/atf-a
Ciona intestinalis
ENSCING00000005364
I
CREB3
Dasypus novemcinctus
ENSDNOG00000041334
I
CREB3
Homo sapiens
ENSG00000107175
D
creb3
Xenopus tropicalis
XB-GENE-959045
I
creb3.S
Xenopus laevis
XB-GENE-959048
I
CREB3L1
Anolis carolinensis
ENSACAG00000004538
I
CREB3L1
Bos taurus
ENSBTAG00000006143
I
CREB3L1
Canis familiaris
ENSCAFG00000009282
I
CREB3L1
Callithrix jacchus
ENSCJAG00000011726
I
CREB3L1
Cavia porcellus
ENSCPOG00000010073
I
creb3l1
Danio rerio
ENSDARG00000015793
I
CREB3L1
Dasypus novemcinctus
ENSDNOG00000010500
I
CREB3L1
Equus caballus
ENSECAG00000018306
I
CREB3L1
Felis catus
ENSFCAG00000018794
I
CREB3L1
Homo sapiens
ENSG00000157613
D
CREB3L1
Gallus gallus
ENSGALG00000008393
I
CREB3L1
Gorilla gorilla
ENSGGOG00000015181
I
CREB3L1
Loxodonta africana
ENSLAFG00000005092
I
CREB3L1
Meleagris gallopavo
ENSMGAG00000011042
I
CREB3L1
Microcebus murinus
ENSMICG00000006853
I
CREB3L1
Myotis lucifugus
ENSMLUG00000009820
I
CREB3L1
Monodelphis domestica
ENSMODG00000019888
I
Creb3l1
Mus musculus
ENSMUSG00000027230
I
CREB3L1
Oryctolagus cuniculus
ENSOCUG00000004418
I
CREB3L1
Otolemur garnettii
ENSOGAG00000008829
I
CREB3L1
Procavia capensis
ENSPCAG00000006313
I
CREB3L1
Pan troglodytes
ENSPTRG00000003543
I
CREB3L1
Pteropus vampyrus
ENSPVAG00000016161
I
Creb3l1
Rattus norvegicus
ENSRNOG00000005413
I
CREB3L1
Sorex araneus
ENSSARG00000011036
I
CREB3L1
Sus scrofa
ENSSSCG00000013263
I
CREB3L1
Taeniopygia guttata
ENSTGUG00000010669
I
CREB3L1
Tursiops truncatus
ENSTTRG00000016515
I
CREB3L1
Vicugna pacos
ENSVPAG00000008868
I
CREB3L2
Anolis carolinensis
ENSACAG00000011643
I
CREB3L2
Bos taurus
ENSBTAG00000015802
I
CREB3L2
Canis familiaris
ENSCAFG00000013481
I
CREB3L2
Choloepus hoffmanni
ENSCHOG00000003404
I
CREB3L2
Callithrix jacchus
ENSCJAG00000012834
I
CREB3L2
Cavia porcellus
ENSCPOG00000008872
I
creb3l2
Danio rerio
ENSDARG00000063563
I
CREB3L2
Dasypus novemcinctus
ENSDNOG00000004102
I
Creb3l2
Dipodomys ordii
ENSDORG00000002788
I
CREB3L2
Equus caballus
ENSECAG00000007609
I
CREB3L2
Erinaceus europaeus
ENSEEUG00000002157
I
CREB3L2
Felis catus
ENSFCAG00000000648
I
CREB3L2
Homo sapiens
ENSG00000182158
I
creb3l2
Gasterosteus aculeatus
ENSGACG00000020083
I
CREB3L2
Gallus gallus
ENSGALG00000012877
I
CREB3L2
Gorilla gorilla
ENSGGOG00000004216
I
CREB3L2
Loxodonta africana
ENSLAFG00000008469
I
CREB3L2
Meleagris gallopavo
ENSMGAG00000013250
I
CREB3L2
Microcebus murinus
ENSMICG00000003960
I
CREB3L2
Myotis lucifugus
ENSMLUG00000030474
I
CREB3L2
Macaca mulatta
ENSMMUG00000016833
I
CREB3L2
Monodelphis domestica
ENSMODG00000013876
D
Creb3l2
Mus musculus
ENSMUSG00000038648
D
CREB3L2
Oryctolagus cuniculus
ENSOCUG00000007313
I
CREB3L2
Otolemur garnettii
ENSOGAG00000010846
I
creb3l2
Oryzias latipes
ENSORLG00000016776
I
CREB3L2
Procavia capensis
ENSPCAG00000014875
I
CREB3L2
Pan troglodytes
ENSPTRG00000019739
I
CREB3L2
Pteropus vampyrus
ENSPVAG00000006793
I
Creb3l2
Rattus norvegicus
ENSRNOG00000012826
I
CREB3L2
Sus scrofa
ENSSSCG00000016520
I
CREB3L2
Tupaia belangeri
ENSTBEG00000004887
I
CREB3L2
Taeniopygia guttata
ENSTGUG00000011582
I
creb3l2
Takifugu rubripes
ENSTRUG00000013114
I
CREB3L2
Tursiops truncatus
ENSTTRG00000004842
I
CREB3L2
Vicugna pacos
ENSVPAG00000009476
I
creb3l2.L
Xenopus laevis
XB-GENE-996214
I
CREB3L3
Myotis lucifugus
ENSMLUG00000008703
I
CREB3L3
Monodelphis domestica
ENSMODG00000000817
I
CREB3L4
Choloepus hoffmanni
ENSCHOG00000002522
I
CrebA
Drosophila melanogaster
FBgn0004396
D
csin104552
Clonorchis sinensis
csin104552
I
ECANG7_04323
Echinococcus canadensis
ECANG7_04323
I
EmuJ_000497100
Echinococcus multilocularis
EmuJ_000497100
I
ENSAMEG00000006633
Ailuropoda melanoleuca
ENSAMEG00000006633
I
ENSAMEG00000011947
Ailuropoda melanoleuca
ENSAMEG00000011947
I
ENSAMEG00000018046
Ailuropoda melanoleuca
ENSAMEG00000018046
I
ENSAMXG00000001763
Astyanax mexicanus
ENSAMXG00000001763
I
ENSAMXG00000011038
Astyanax mexicanus
ENSAMXG00000011038
I
ENSAMXG00000021541
Astyanax mexicanus
ENSAMXG00000021541
I
ENSAPLG00000000926
Anas platyrhynchos
ENSAPLG00000000926
I
ENSAPLG00000012813
Anas platyrhynchos
ENSAPLG00000012813
I
ENSBTAP00000020987-D1
Bos grunniens
ENSBTAP00000020987-D1
I
ENSCSAG00000005658
Chlorocebus sabaeus
ENSCSAG00000005658
I
ENSCSAG00000008752
Chlorocebus sabaeus
ENSCSAG00000008752
I
ENSCSAVG00000008562
Ciona savignyi
ENSCSAVG00000008562
I
ENSEEUG00000000666
Erinaceus europaeus
ENSEEUG00000000666
I
ENSFALG00000000511
Ficedula albicollis
ENSFALG00000000511
I
ENSFALG00000000900
Ficedula albicollis
ENSFALG00000000900
I
ENSFALG00000006242
Ficedula albicollis
ENSFALG00000006242
I
ENSGMOG00000010438
Gadus morhua
ENSGMOG00000010438
I
ENSLACG00000007675
Latimeria chalumnae
ENSLACG00000007675
I
ENSLACG00000008535
Latimeria chalumnae
ENSLACG00000008535
I
ENSLOCG00000005600
Lepisosteus oculatus
ENSLOCG00000005600
I
ENSLOCG00000008658
Lepisosteus oculatus
ENSLOCG00000008658
I
ENSMEUG00000002178
Macropus eugenii
ENSMEUG00000002178
I
ENSMEUG00000013573
Macropus eugenii
ENSMEUG00000013573
I
ENSMPUG00000003955
Mustela putorius furo
ENSMPUG00000003955
I
ENSMPUG00000005639
Mustela putorius furo
ENSMPUG00000005639
I
ENSNLEG00000004179
Nomascus leucogenys
ENSNLEG00000004179
I
ENSNLEG00000014012
Nomascus leucogenys
ENSNLEG00000014012
I
ENSNLEG00000026880
Nomascus leucogenys
ENSNLEG00000026880
I
ENSOANG00000000830
Ornithorhynchus anatinus
ENSOANG00000000830
I
ENSOARG00000009957
Ovis aries
ENSOARG00000009957
I
ENSONIG00000015219
Oreochromis niloticus
ENSONIG00000015219
I
ENSONIG00000017874
Oreochromis niloticus
ENSONIG00000017874
I
ENSORLG00000006015
Oryzias latipes
ENSORLG00000006015
I
ENSP00000288400
Macaca fascicularis
ENSP00000288400
I
ENSP00000288400-D1
Bos grunniens
ENSP00000288400-D1
I
ENSP00000329140
Macaca fascicularis
ENSP00000329140
I
ENSPANG00000010323
Papio anubis
ENSPANG00000010323
I
ENSPANG00000015384
Papio anubis
ENSPANG00000015384
I
ENSPFOG00000007076
Poecilia formosa
ENSPFOG00000007076
I
ENSPFOG00000012285
Poecilia formosa
ENSPFOG00000012285
I
ENSPPYG00000003324
Pongo abelii
ENSPPYG00000003324
I
ENSPPYG00000018036
Pongo abelii
ENSPPYG00000018036
I
ENSPSIG00000004461
Pelodiscus sinensis
ENSPSIG00000004461
I
ENSPSIG00000006461
Pelodiscus sinensis
ENSPSIG00000006461
I
ENSSHAG00000011584
Sarcophilus harrisii
ENSSHAG00000011584
I
ENSSHAG00000015230
Sarcophilus harrisii
ENSSHAG00000015230
I
ENSSTOG00000009818
Ictidomys tridecemlineatus
ENSSTOG00000009818
I
ENSSTOG00000012697
Ictidomys tridecemlineatus
ENSSTOG00000012697
I
ENSTRUG00000007014
Takifugu rubripes
ENSTRUG00000007014
I
ENSXMAG00000004363
Xiphophorus maculatus
ENSXMAG00000004363
I
ENSXMAG00000004377
Xiphophorus maculatus
ENSXMAG00000004377
I
estExt_fgenesh2_pg.C_2260058
Branchiostoma floridae
estExt_fgenesh2_pg.C_2260058
I
estExt_fgenesh2_pg.C_290087
Branchiostoma floridae
estExt_fgenesh2_pg.C_290087
I
GA20362
Drosophila pseudoobscura
FBgn0080357
I
GB47941
Apis mellifera
GB47941
I
GB54131
Apis mellifera
GB54131
N
GD14552
Drosophila simulans
FBgn0186233
I
GE22248
Drosophila yakuba
FBgn0239474
I
GF10055
Drosophila ananassae
FBgn0087096
I
Gfo_R014160
Geospiza fortis
Gfo_R014160
I
Gfo_R015139
Geospiza fortis
Gfo_R015139
I
GG15906
Drosophila erecta
FBgn0108141
I
GH14739
Drosophila grimshawi
FBgn0122215
I
GI13117
Drosophila mojavensis
FBgn0135874
I
GJ13865
Drosophila virilis
FBgn0201084
I
GK10597
Drosophila willistoni
FBgn0212612
I
GL24866
Drosophila persimilis
FBgn0162454
I
GM25536
Drosophila sechellia
FBgn0180393
I
HHAL007261-PA
Halyomorpha halys
HHAL007261-PA
N
HmN_000706100
Hymenolepis microstoma
HmN_000706100
I
HNAJ_0001185401
Hymenolepis nana
HNAJ_0001185401
I
Hsal_06644--XP_393982.2_APIME
Harpegnathos saltator
Hsal_06644--XP_393982.2_APIME
N
ISCW008037
Ixodes scapularis
ISCW008037
I
KGM_16626
Danaus plexippus
KGM_16626
N
KGM_17956
Danaus plexippus
KGM_17956
I
L798_06019
Zootermopsis nevadensis
L798_06019
I
L798_13615
Zootermopsis nevadensis
L798_13615
N
LCUP001547
Lucilia cuprina
LCUP001547
I
LLOJ001811
Lutzomyia longipalpis
LLOJ001811
N
LLOJ004886
Lutzomyia longipalpis
LLOJ004886
I
LotgiG78289
Lottia gigantea
LotgiG78289
I
MDOA014193
Musca domestica
MDOA014193
I
Myotis_brandtii_CREB3L1_10025503
Myotis brandtii
Myotis_brandtii_CREB3L1_10025503
I
Myotis_brandtii_CREB3L2_10008636
Myotis brandtii
Myotis_brandtii_CREB3L2_10008636
I
Myotis_brandtii_CREB3L3_10016301
Myotis brandtii
Myotis_brandtii_CREB3L3_10016301
I
NEMVEDRAFT_v1g28519
Nematostella vectensis
NEMVEDRAFT_v1g28519
I
Ocbimv22006104m.g
Octopus bimaculoides
Ocbimv22006104m.g
I
Ogr17869
Ophisaurus gracilis
Ogr17869
I
PHUM261390
Pediculus humanus
PHUM261390
I
PHUM399860
Pediculus humanus
PHUM399860
N
Pvit_08659
Pogona vitticeps
Pvit_08659
I
Pvit_09828
Pogona vitticeps
Pvit_09828
I
Pvit_14149
Pogona vitticeps
Pvit_14149
I
Sakowv30020964m.g
Saccoglossus kowalevskii
Sakowv30020964m.g
I
SINV13874
Solenopsis invicta
SINV13874
N
SINV21499
Solenopsis invicta
SINV21499
I
Sjc_0112190
Schistosoma japonicum
Sjc_0112190
I
SMAR014738
Strigamia maritima
SMAR014738
I
Smp_151280
Schistosoma mansoni
Smp_151280
I
SMU15032542
Schmidtea mediterranea
SMU15032542
I
SPU_006803
Strongylocentrotus purpuratus
SPU_006803
N
T265_10456
Opisthorchis viverrini
T265_10456
I
Tal_R001519
Tyto alba
Tal_R001519
I
Tal_R007836
Tyto alba
Tal_R007836
I
TC010778
Tribolium castaneum
TC010778
N
TC011118
Tribolium castaneum
TC011118
I
TTAC_0000200101
Hydatigera taeniaeformis
TTAC_0000200101
I
XP_002160519.1
Hydra magnipapillata
XP_002160519.1
I