CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB07G14580
(
Oryza brachyantha
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
OB07G14580
T042031_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN
NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.888
0.961
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.888
0.961
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.875
0.863
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC
GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.875
0.863
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC
GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.875
0.863
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH
DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.862
0.843
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.862
0.843
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.862
0.804
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY
RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.862
0.804
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.851
0.804
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.851
0.784
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT
ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.851
0.784
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN
NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.842
0.784
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB07G14580.1
bHLH
121
171
ATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQ
Links
Other
bHLH
family TFs
Other
Oryza brachyantha
TFs
858 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29661.m000926
Ricinus communis
29661.m000926
I
29706.m001328
Ricinus communis
29706.m001328
I
29812.m000204
Ricinus communis
29812.m000204
I
AMTR_s00007p00193000
Amborella trichopoda
AMTR_s00007p00193000
I
Aquca_004_00181
Aquilegia coerulea
Aquca_004_00181
I
AT1G17520
Arabidopsis thaliana
AT1G17520
I
AT1G72740
Arabidopsis thaliana
AT1G72740
D
BGIOSGA003871
Oryza indica
BGIOSGA003871
I
BGIOSGA004300
Oryza indica
BGIOSGA004300
I
Bo3g096520
Brassica oleracea
Bo3g096520
I
Bo5g023860
Brassica oleracea
Bo5g023860
I
Bo5g077530
Brassica oleracea
Bo5g077530
I
Bo6g018740
Brassica oleracea
Bo6g018740
I
Bo6g116150
Brassica oleracea
Bo6g116150
I
Bo8g067280
Brassica oleracea
Bo8g067280
I
Bo8g104830
Brassica oleracea
Bo8g104830
I
Bo9g019040
Brassica oleracea
Bo9g019040
I
Bostr.0568s0184
Boechera stricta
Bostr.0568s0184
I
Bostr.10273s0077
Boechera stricta
Bostr.10273s0077
I
Bostr.26675s0174
Boechera stricta
Bostr.26675s0174
I
Bostr.6864s0256
Boechera stricta
Bostr.6864s0256
I
Bostr.7128s0363
Boechera stricta
Bostr.7128s0363
I
Bra016037
Brassica rapa
Bra016037
I
Bra016598
Brassica rapa
Bra016598
I
Bra018818
Brassica rapa
Bra018818
I
Bra024438
Brassica rapa
Bra024438
I
Bra025967
Brassica rapa
Bra025967
I
Bra030992
Brassica rapa
Bra030992
I
Bra036035
Brassica rapa
Bra036035
I
Bra037837
Brassica rapa
Bra037837
I
Bra037839
Brassica rapa
Bra037839
I
Bra039650
Brassica rapa
Bra039650
I
BRADI2G42240
Brachypodium distachyon
BRADI2G42240
I
Cagra.0342s0046
Capsella grandiflora
Cagra.0342s0046
I
Cagra.0824s0121
Capsella grandiflora
Cagra.0824s0121
I
Cagra.1013s0027
Capsella grandiflora
Cagra.1013s0027
I
Cagra.2826s0004
Capsella grandiflora
Cagra.2826s0004
I
Cagra.4491s0006
Capsella grandiflora
Cagra.4491s0006
I
Carubv10009836m.g
Capsella rubella
Carubv10009836m.g
I
Carubv10009890m.g
Capsella rubella
Carubv10009890m.g
I
Carubv10017722m.g
Capsella rubella
Carubv10017722m.g
I
Carubv10020636m.g
Capsella rubella
Carubv10020636m.g
I
Carubv10026874m.g
Capsella rubella
Carubv10026874m.g
I
cassava34930.m1
Manihot esculenta
cassava34930.m1
I
cassava37744.valid.m1
Manihot esculenta
cassava37744.valid.m1
I
cassava7508.valid.m1
Manihot esculenta
cassava7508.valid.m1
I
Ca_08043
Cicer arietinum
Ca_08043
I
Ciclev10026245m.g
Citrus clementina
Ciclev10026245m.g
I
Ciclev10028926m.g
Citrus clementina
Ciclev10028926m.g
I
Cla006547
Citrullus lanatus
Cla006547
I
Cla012798
Citrullus lanatus
Cla012798
I
Cucsa.298390
Cucumis sativus
Cucsa.298390
I
Cucsa.341020
Cucumis sativus
Cucsa.341020
I
Eucgr.I01053
Eucalyptus grandis
Eucgr.I01053
I
EuGene.0000030935
Micromonas pusilla
EuGene.0000030935
I
EuGene.1300010252
Ostreococcus RCC809
EuGene.1300010252
I
evm.TU.supercontig_106.31
Carica papaya
evm.TU.supercontig_106.31
I
evm.TU.supercontig_25.81
Carica papaya
evm.TU.supercontig_25.81
I
fgenesh2_kg.2__1540__AT1G72740.1
Arabidopsis lyrata
fgenesh2_kg.2__1540__AT1G72740.1
I
gene05764-v1.0-hybrid
Fragaria vesca
gene05764-v1.0-hybrid
I
gene25445-v1.0-hybrid
Fragaria vesca
gene25445-v1.0-hybrid
I
GLYMA07G00930
Glycine max
GLYMA07G00930
I
GLYMA08G20270
Glycine max
GLYMA08G20270
I
GLYMA09G03390
Glycine max
GLYMA09G03390
I
GLYMA15G14320
Glycine max
GLYMA15G14320
I
Gorai.005G230800
Gossypium raimondii
Gorai.005G230800
I
Gorai.009G143000
Gossypium raimondii
Gorai.009G143000
I
GRMZM2G087817
Zea mays
GRMZM2G087817
I
GRMZM2G136887
Zea mays
GRMZM2G136887
I
GSMUA_Achr2G13040_001
Musa acuminata
GSMUA_Achr2G13040_001
I
GSMUA_Achr6G30000_001
Musa acuminata
GSMUA_Achr6G30000_001
I
GSMUA_Achr6G31260_001
Musa acuminata
GSMUA_Achr6G31260_001
I
GSMUA_Achr7G01090_001
Musa acuminata
GSMUA_Achr7G01090_001
I
gw1.1.287.1
Physcomitrella patens
gw1.1.287.1
I
gw1.176.27.1
Physcomitrella patens
gw1.176.27.1
I
LPERR01G18090
Leersia perrieri
LPERR01G18090
I
Lus10012092.g
Linum usitatissimum
Lus10012092.g
I
Lus10014653.g
Linum usitatissimum
Lus10014653.g
I
Lus10025203.g
Linum usitatissimum
Lus10025203.g
I
Lus10033775.g
Linum usitatissimum
Lus10033775.g
I
MDP0000239354
Malus domestica
MDP0000239354
I
mgf004823m
Mimulus guttatus
mgf004823m
I
mgf009594m
Mimulus guttatus
mgf009594m
I
MTR_0095s0040
Medicago truncatula
MTR_0095s0040
I
MTR_1g041765
Medicago truncatula
MTR_1g041765
I
MTR_2g031870
Medicago truncatula
MTR_2g031870
I
MTR_5g015340
Medicago truncatula
MTR_5g015340
I
OB01G30760
Oryza brachyantha
OB01G30760
I
OB01G37330
Oryza brachyantha
OB01G37330
I
OBART01G21150
Oryza barthii
OBART01G21150
I
OBART01G28260
Oryza barthii
OBART01G28260
I
OGLUM01G32190
Oryza glumaepatula
OGLUM01G32190
I
OLONG_008666
Oryza longistaminata
OLONG_008666
I
OLONG_011068
Oryza longistaminata
OLONG_011068
I
OMERI01G19490
Oryza meridionalis
OMERI01G19490
I
OMERI01G19510
Oryza meridionalis
OMERI01G19510
I
OMERI05G07460
Oryza meridionalis
OMERI05G07460
I
ONIVA01G23780
Oryza nivara
ONIVA01G23780
I
ONIVA01G32190
Oryza nivara
ONIVA01G32190
I
OPUNC01G21220
Oryza punctata
OPUNC01G21220
I
OPUNC01G28080
Oryza punctata
OPUNC01G28080
I
orange1.1g022048m.g
Citrus sinensis
orange1.1g022048m.g
I
orange1.1g023740m.g
Citrus sinensis
orange1.1g023740m.g
I
ORGLA01G0168300
Oryza glaberrima
ORGLA01G0168300
I
ORGLA01G0233700
Oryza glaberrima
ORGLA01G0233700
I
ORUFI01G23880
Oryza rufipogon
ORUFI01G23880
I
ORUFI01G31370
Oryza rufipogon
ORUFI01G31370
I
OS01G0589300
Oryza sativa
OS01G0589300
I
OS01G0708000
Oryza sativa
OS01G0708000
D
OSTLU_27049
Ostreococcus lucimarinus
OSTLU_27049
I
Pavir.Ea02064
Panicum virgatum
Pavir.Ea02064
I
Pavir.J27218
Panicum virgatum
Pavir.J27218
I
PDK_20s1413011g001
Phoenix dactylifera
PDK_20s1413011g001
I
PDK_20s1467521g002
Phoenix dactylifera
PDK_20s1467521g002
I
PGSC0003DMG400023131
Solanum tuberosum
PGSC0003DMG400023131
I
PGSC0003DMG401025742
Solanum tuberosum
PGSC0003DMG401025742
I
PK06103.1
Cannabis sativa
PK06103.1
D
PK19870.1
Cannabis sativa
PK19870.1
I
Pm002374
Prunus mume
Pm002374
I
POPTR_0001s30000
Populus trichocarpa
POPTR_0001s30000
I
POPTR_0007s14920
Populus trichocarpa
POPTR_0007s14920
I
POPTR_0009s09020
Populus trichocarpa
POPTR_0009s09020
I
POPTR_0014s01010
Populus trichocarpa
POPTR_0014s01010
I
PRUPE_ppa009220mg
Prunus persica
PRUPE_ppa009220mg
I
SapurV1A.0005s0260
Salix purpurea
SapurV1A.0005s0260
I
SapurV1A.0019s0460
Salix purpurea
SapurV1A.0019s0460
I
SapurV1A.0235s0100
Salix purpurea
SapurV1A.0235s0100
I
SapurV1A.1368s0050
Salix purpurea
SapurV1A.1368s0050
I
Sb03g026470
Sorghum bicolor
Sb03g026470
I
scaffold_101953.1
Arabidopsis lyrata
scaffold_101953.1
I
SELMODRAFT_413266
Selaginella moellendorffii
SELMODRAFT_413266
I
SELMODRAFT_426759
Selaginella moellendorffii
SELMODRAFT_426759
I
SELMODRAFT_49296
Selaginella moellendorffii
SELMODRAFT_49296
I
SELMODRAFT_49297
Selaginella moellendorffii
SELMODRAFT_49297
I
Si002403m.g
Setaria italica
Si002403m.g
I
Solyc01g106940.2
Solanum lycopersicum
Solyc01g106940.2
I
Solyc11g044320.1
Solanum lycopersicum
Solyc11g044320.1
I
TCM_007242
Theobroma cacao
TCM_007242
I
TCM_029078
Theobroma cacao
TCM_029078
I
Thhalv10004691m.g
Eutrema salsugineum
Thhalv10004691m.g
I
Thhalv10008387m.g
Eutrema salsugineum
Thhalv10008387m.g
I
Thhalv10010562m.g
Eutrema salsugineum
Thhalv10010562m.g
I
Thhalv10011686m.g
Eutrema salsugineum
Thhalv10011686m.g
I
TRAES3BF118300070CFD_g
Triticum aestivum
TRAES3BF118300070CFD_g
I
Traes_3AL_CF481F6AC
Triticum aestivum
Traes_3AL_CF481F6AC
I
TRB1
Arabidopsis thaliana
AT1G49950
D
TRB1
Arabidopsis lyrata
fgenesh2_kg.1__4077__AT1G49950.2
I
TRB1
Vitis vinifera
VIT_03s0091g01030
I
TRB2
Arabidopsis thaliana
AT5G67580
D
TRB2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8002157
I
TRB3
Arabidopsis thaliana
AT3G49850
I
TRB3
Arabidopsis lyrata
fgenesh2_kg.5__1337__AT3G49850.1
I
TRIUR3_08672
Triticum urartu
TRIUR3_08672
I
VIT_00s1311g00020
Vitis vinifera
VIT_00s1311g00020
I
VIT_07s0151g00480
Vitis vinifera
VIT_07s0151g00480
I