CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI06G29810
(
Oryza rufipogon
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ORUFI06G29810
T043093_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI06G29810.1
bHLH
154
201
SKNLMAERRRRKRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELL
Links
Other
bHLH
family TFs
Other
Oryza rufipogon
TFs
151 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH61
Arabidopsis thaliana
AT5G10570
N
0.914
BHLH93
Arabidopsis thaliana
AT5G65640
N
0.914
BGIOSGA023624
Oryza indica
BGIOSGA023624
N
0.914
Bo3g097890
Brassica oleracea
Bo3g097890
N
0.914
Bo9g171940
Brassica oleracea
Bo9g171940
N
0.914
Bra024404
Brassica rapa
Bra024404
N
0.914
BRADI1G30000
Brachypodium distachyon
BRADI1G30000
N
0.914
fgenesh2_kg.6__1024__AT5G10570.1
Arabidopsis lyrata
fgenesh2_kg.6__1024__AT5G10570.1
N
0.914
bHLH093
Arabidopsis lyrata
fgenesh2_kg.8__2611__AT5G65640.1
N
0.914
GLYMA01G02390
Glycine max
GLYMA01G02390
N
0.914
GLYMA04G09580
Glycine max
GLYMA04G09580
N
0.914
GLYMA06G09670
Glycine max
GLYMA06G09670
N
0.914
GLYMA08G37240
Glycine max
GLYMA08G37240
N
0.914
GLYMA09G33590
Glycine max
GLYMA09G33590
N
0.914
GRMZM2G128807
Zea mays
GRMZM2G128807
N
0.914
GSMUA_Achr1G26300_001
Musa acuminata
GSMUA_Achr1G26300_001
N
0.914
GSMUA_Achr7G03930_001
Musa acuminata
GSMUA_Achr7G03930_001
N
0.914
GSMUA_Achr8G34120_001
Musa acuminata
GSMUA_Achr8G34120_001
N
0.914
LPERR06G23280
Leersia perrieri
LPERR06G23280
N
0.914
MTR_5g030770
Medicago truncatula
MTR_5g030770
N
0.914
OBART06G27800
Oryza barthii
OBART06G27800
N
0.914
OBART06G27860
Oryza barthii
OBART06G27860
N
0.914
OGLUM06G29220
Oryza glumaepatula
OGLUM06G29220
N
0.914
OMERI06G27810
Oryza meridionalis
OMERI06G27810
N
0.914
ONIVA06G30800
Oryza nivara
ONIVA06G30800
N
0.914
OPUNC06G25390
Oryza punctata
OPUNC06G25390
N
0.914
PGSC0003DMG400006394
Solanum tuberosum
PGSC0003DMG400006394
N
0.914
PGSC0003DMG400010388
Solanum tuberosum
PGSC0003DMG400010388
N
0.914
PGSC0003DMG400030616
Solanum tuberosum
PGSC0003DMG400030616
N
0.914
POPTR_0002s10910
Populus trichocarpa
POPTR_0002s10910
N
0.914
PRUPE_ppa007656mg
Prunus persica
PRUPE_ppa007656mg
N
0.914
PRUPE_ppa016514mg
Prunus persica
PRUPE_ppa016514mg
N
0.914
Sb10g030470
Sorghum bicolor
Sb10g030470
N
0.914
Si006877m.g
Setaria italica
Si006877m.g
N
0.914
Solyc02g063430.2
Solanum lycopersicum
Solyc02g063430.2
N
0.914
Solyc02g091690.2
Solanum lycopersicum
Solyc02g091690.2
N
0.914
TCM_000915
Theobroma cacao
TCM_000915
N
0.914
TCM_034574
Theobroma cacao
TCM_034574
N
0.914
Traes_7DL_67FF12B6A
Triticum aestivum
Traes_7DL_67FF12B6A
N
0.914
VIT_00s1312g00010
Vitis vinifera
VIT_00s1312g00010
N
0.914
VIT_17s0000g03550
Vitis vinifera
VIT_17s0000g03550
N
0.914
VIT_18s0001g08040
Vitis vinifera
VIT_18s0001g08040
N
0.914
Ca_11531
Cicer arietinum
Ca_11531
N
0.914
Pm002283
Prunus mume
Pm002283
N
0.914
Pm004330
Prunus mume
Pm004330
N
0.914
28179.m000457
Ricinus communis
28179.m000457
N
0.914
29596.m000688
Ricinus communis
29596.m000688
N
0.914
cassava1707.valid.m1
Manihot esculenta
cassava1707.valid.m1
N
0.914
cassava20174.m1
Manihot esculenta
cassava20174.m1
N
0.914
cassava35909.valid.m1
Manihot esculenta
cassava35909.valid.m1
N
0.914
cassava42105.valid.m1
Manihot esculenta
cassava42105.valid.m1
N
0.914
Cucsa.103760
Cucumis sativus
Cucsa.103760
N
0.914
mgf011848m
Mimulus guttatus
mgf011848m
N
0.914
mgf017272m
Mimulus guttatus
mgf017272m
N
0.914
Bostr.0568s0223
Boechera stricta
Bostr.0568s0223
N
0.914
Bostr.13175s0042
Boechera stricta
Bostr.13175s0042
N
0.914
Cagra.0917s0023
Capsella grandiflora
Cagra.0917s0023
N
0.914
Carubv10026606m.g
Capsella rubella
Carubv10026606m.g
N
0.914
Ciclev10001683m.g
Citrus clementina
Ciclev10001683m.g
N
0.914
Ciclev10025967m.g
Citrus clementina
Ciclev10025967m.g
N
0.914
Eucgr.F00459
Eucalyptus grandis
Eucgr.F00459
N
0.914
Eucgr.F02171
Eucalyptus grandis
Eucgr.F02171
N
0.914
Eucgr.I00608
Eucalyptus grandis
Eucgr.I00608
N
0.914
gene05560-v1.0-hybrid
Fragaria vesca
gene05560-v1.0-hybrid
N
0.914
gene26895-v1.0-hybrid
Fragaria vesca
gene26895-v1.0-hybrid
N
0.914
Gorai.002G137900
Gossypium raimondii
Gorai.002G137900
N
0.914
Gorai.003G035900
Gossypium raimondii
Gorai.003G035900
N
0.914
Gorai.007G229900
Gossypium raimondii
Gorai.007G229900
N
0.914
Gorai.009G226200
Gossypium raimondii
Gorai.009G226200
N
0.914
Gorai.010G031800
Gossypium raimondii
Gorai.010G031800
N
0.914
Lus10002160.g
Linum usitatissimum
Lus10002160.g
N
0.914
Lus10039631.g
Linum usitatissimum
Lus10039631.g
N
0.914
MDP0000175282
Malus domestica
MDP0000175282
N
0.914
MDP0000178782
Malus domestica
MDP0000178782
N
0.914
MDP0000312274
Malus domestica
MDP0000312274
N
0.914
MDP0000603926
Malus domestica
MDP0000603926
N
0.914
MDP0000644807
Malus domestica
MDP0000644807
N
0.914
orange1.1g018897m.g
Citrus sinensis
orange1.1g018897m.g
N
0.914
orange1.1g038389m.g
Citrus sinensis
orange1.1g038389m.g
N
0.914
Pavir.J18000
Panicum virgatum
Pavir.J18000
N
0.914
SapurV1A.0004s0900
Salix purpurea
SapurV1A.0004s0900
N
0.914
Thhalv10004732m.g
Eutrema salsugineum
Thhalv10004732m.g
N
0.914
PK12634.1
Cannabis sativa
PK12634.1
N
0.914
chr2.CM0177.460.nc
Lotus japonicus
chr2.CM0177.460.nc
N
0.914
LjSGA_043777.1
Lotus japonicus
LjSGA_043777.1
N
0.914
PDK_20s1771821g001
Phoenix dactylifera
PDK_20s1771821g001
N
0.914
GRMZM2G435015
Zea mays
GRMZM2G435015
N
0.894
PGSC0003DMG400002056
Solanum tuberosum
PGSC0003DMG400002056
N
0.894
Solyc12g088130.1
Solanum lycopersicum
Solyc12g088130.1
N
0.894
BGIOSGA011499
Oryza indica
BGIOSGA011499
N
0.890
GRMZM2G173372
Zea mays
GRMZM2G173372
N
0.890
GSMUA_AchrUn_randomG16890_001
Musa acuminata
GSMUA_AchrUn_randomG16890_001
N
0.890
LPERR03G02580
Leersia perrieri
LPERR03G02580
N
0.890
MLOC_55768
Hordeum vulgare
MLOC_55768
N
0.890
OB03G12820
Oryza brachyantha
OB03G12820
N
0.890
OBART03G02840
Oryza barthii
OBART03G02840
N
0.890
OGLUM03G02750
Oryza glumaepatula
OGLUM03G02750
N
0.890
OLONG_005983
Oryza longistaminata
OLONG_005983
N
0.890
OMERI03G02800
Oryza meridionalis
OMERI03G02800
N
0.890
ONIVA03G02430
Oryza nivara
ONIVA03G02430
N
0.890
OPUNC03G02570
Oryza punctata
OPUNC03G02570
N
0.890
ORGLA03G0026100
Oryza glaberrima
ORGLA03G0026100
N
0.890
ORUFI03G02540
Oryza rufipogon
ORUFI03G02540
N
0.890
OS03G0135700
Oryza sativa
OS03G0135700
N
0.890
Sb01g047940
Sorghum bicolor
Sb01g047940
N
0.890
Si036470m.g
Setaria italica
Si036470m.g
N
0.890
Traes_4DL_0075CCAD9
Triticum aestivum
Traes_4DL_0075CCAD9
N
0.890
Traes_4DL_1C0F38900
Triticum aestivum
Traes_4DL_1C0F38900
N
0.890
Traes_4DL_5851FBD0C
Triticum aestivum
Traes_4DL_5851FBD0C
N
0.890
TRIUR3_29035
Triticum urartu
TRIUR3_29035
N
0.890
Cla014300
Citrullus lanatus
Cla014300
N
0.890
evm.TU.supercontig_129.19
Carica papaya
evm.TU.supercontig_129.19
N
0.890
Pavir.Ia04450
Panicum virgatum
Pavir.Ia04450
N
0.890
Pavir.Ib00206
Panicum virgatum
Pavir.Ib00206
N
0.890
Pavir.J18595
Panicum virgatum
Pavir.J18595
N
0.890
Pavir.J25463
Panicum virgatum
Pavir.J25463
N
0.890
F775_00539
Aegilops tauschii
F775_00539
N
0.888
GLYMA02G38240
Glycine max
GLYMA02G38240
N
0.888
GLYMA14G36370
Glycine max
GLYMA14G36370
N
0.888
MTR_3g111290
Medicago truncatula
MTR_3g111290
N
0.888
Traes_4DL_ACF3BE9C5
Triticum aestivum
Traes_4DL_ACF3BE9C5
N
0.888
Ca_04981
Cicer arietinum
Ca_04981
N
0.888
Cla022518
Citrullus lanatus
Cla022518
N
0.888
Cucsa.160860
Cucumis sativus
Cucsa.160860
N
0.888
Cagra.1085s0002
Capsella grandiflora
Cagra.1085s0002
N
0.888
Carubv10001486m.g
Capsella rubella
Carubv10001486m.g
N
0.888
chr2.CM0504.20.nd
Lotus japonicus
chr2.CM0504.20.nd
N
0.888
Bo2g168250
Brassica oleracea
Bo2g168250
N
0.884
Bra031852
Brassica rapa
Bra031852
N
0.884
Aquca_010_00033
Aquilegia coerulea
Aquca_010_00033
N
0.884
TRIUR3_23651
Triticum urartu
TRIUR3_23651
N
0.864
Cla023435
Citrullus lanatus
Cla023435
N
0.864
Cucsa.312190
Cucumis sativus
Cucsa.312190
N
0.864
BGIOSGA031474
Oryza indica
BGIOSGA031474
N
0.860
BRADI1G76030
Brachypodium distachyon
BRADI1G76030
N
0.860
OBART10G17440
Oryza barthii
OBART10G17440
N
0.860
OGLUM10G17470
Oryza glumaepatula
OGLUM10G17470
N
0.860
OMERI10G13920
Oryza meridionalis
OMERI10G13920
N
0.860
ONIVA10G19680
Oryza nivara
ONIVA10G19680
N
0.860
OPUNC10G15730
Oryza punctata
OPUNC10G15730
N
0.860
ORGLA10G0124500
Oryza glaberrima
ORGLA10G0124500
N
0.860
ORUFI10G18500
Oryza rufipogon
ORUFI10G18500
N
0.860
OS10G0544200
Oryza sativa
OS10G0544200
N
0.860
evm.TU.supercontig_177.1
Carica papaya
evm.TU.supercontig_177.1
N
0.860
30131.m006993
Ricinus communis
30131.m006993
I
0.856
cassava7475.valid.m1
Manihot esculenta
cassava7475.valid.m1
I
0.856
SELMODRAFT_77288
Selaginella moellendorffii
SELMODRAFT_77288
N
0.855
Traes_3AS_1FD49785C
Triticum aestivum
Traes_3AS_1FD49785C
N
0.851
mgf001568m
Mimulus guttatus
mgf001568m
N
0.849
Gorai.009G337700
Gossypium raimondii
Gorai.009G337700
N
0.848
Traes_4BL_0F2281616
Triticum aestivum
Traes_4BL_0F2281616
N
0.847