PGSC0003DMG401010822 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG401010822 T043527_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.856 0.776
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.856 0.776
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.856 0.776
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.856 0.755
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.856 0.755
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.843 0.755
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400028057 bHLH 216 264
PGSC0003DMT400028058 bHLH 216 264

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400005525 Solanum tuberosum PGSC0003DMG400005525 I 0.914
Solyc10g009270.2 Solanum lycopersicum Solyc10g009270.2 I 0.914
F775_11133 Aegilops tauschii F775_11133 I 0.867
GLYMA02G09670 Glycine max GLYMA02G09670 I 0.867
MTR_8g024770 Medicago truncatula MTR_8g024770 I 0.867
MTR_8g024790 Medicago truncatula MTR_8g024790 I 0.867
PGSC0003DMG400012237 Solanum tuberosum PGSC0003DMG400012237 I 0.867
PRUPE_ppa005343mg Prunus persica PRUPE_ppa005343mg I 0.867
Sb09g008120 Sorghum bicolor Sb09g008120 I 0.867
Si021549m.g Setaria italica Si021549m.g I 0.867
Solyc08g083170.1 Solanum lycopersicum Solyc08g083170.1 I 0.867
TRIUR3_29908 Triticum urartu TRIUR3_29908 I 0.867
Pm029399 Prunus mume Pm029399 I 0.867
gene01894-v1.0-hybrid Fragaria vesca gene01894-v1.0-hybrid I 0.867
Pavir.Ca00449 Panicum virgatum Pavir.Ca00449 I 0.867
Pavir.Cb01851 Panicum virgatum Pavir.Cb01851 I 0.867
Cla008954 Citrullus lanatus Cla008954 I 0.864
Cucsa.321840 Cucumis sativus Cucsa.321840 I 0.864
MYC2 Arabidopsis thaliana AT1G32640 D 0.856
MYC4 Arabidopsis thaliana AT4G17880 D 0.856
MYC3 Arabidopsis thaliana AT5G46760 D 0.856
Bo01130s010 Brassica oleracea Bo01130s010 I 0.856
Bo1g017990 Brassica oleracea Bo1g017990 I 0.856
Bo5g086990 Brassica oleracea Bo5g086990 I 0.856
Bo7g075710 Brassica oleracea Bo7g075710 I 0.856
Bo8g028850 Brassica oleracea Bo8g028850 I 0.856
Bo9g065530 Brassica oleracea Bo9g065530 I 0.856
Bo9g066680 Brassica oleracea Bo9g066680 I 0.856
Bra010178 Brassica rapa Bra010178 I 0.856
Bra013263 Brassica rapa Bra013263 I 0.856
Bra017523 Brassica rapa Bra017523 I 0.856
Bra017527 Brassica rapa Bra017527 I 0.856
Bra024998 Brassica rapa Bra024998 I 0.856
fgenesh2_kg.7__2520__AT4G17880.1 Arabidopsis lyrata fgenesh2_kg.7__2520__AT4G17880.1 I 0.856
GLYMA01G02251 Glycine max GLYMA01G02251 I 0.856
GLYMA01G12740 Glycine max GLYMA01G12740 I 0.856
GLYMA08G36720 Glycine max GLYMA08G36720 I 0.856
GLYMA09G33730 Glycine max GLYMA09G33730 I 0.856
MTR_5g030430 Medicago truncatula MTR_5g030430 I 0.856
PGSC0003DMG400001161 Solanum tuberosum PGSC0003DMG400001161 I 0.856
PGSC0003DMG400017535 Solanum tuberosum PGSC0003DMG400017535 I 0.856
POPTR_0003s09090 Populus trichocarpa POPTR_0003s09090 I 0.856
PRUPE_ppa002404mg Prunus persica PRUPE_ppa002404mg I 0.856
ATMYC2 Arabidopsis lyrata scaffold_103634.1 I 0.856
scaffold_800152.1 Arabidopsis lyrata scaffold_800152.1 I 0.856
Solyc08g076930.1 Solanum lycopersicum Solyc08g076930.1 I 0.856
Ca_11514 Cicer arietinum Ca_11514 I 0.856
Ca_12352 Cicer arietinum Ca_12352 I 0.856
Pm023237 Prunus mume Pm023237 I 0.856
mgf002775m Mimulus guttatus mgf002775m I 0.856
Bostr.28243s0060 Boechera stricta Bostr.28243s0060 I 0.856
Bostr.30275s0255 Boechera stricta Bostr.30275s0255 I 0.856
Bostr.3359s0090 Boechera stricta Bostr.3359s0090 I 0.856
Cagra.0751s0023 Capsella grandiflora Cagra.0751s0023 I 0.856
Cagra.3356s0080 Capsella grandiflora Cagra.3356s0080 I 0.856
Cagra.7865s0024 Capsella grandiflora Cagra.7865s0024 I 0.856
Carubv10004392m.g Capsella rubella Carubv10004392m.g I 0.856
Carubv10008586m.g Capsella rubella Carubv10008586m.g I 0.856
Carubv10028441m.g Capsella rubella Carubv10028441m.g I 0.856
gene10501-v1.0-hybrid Fragaria vesca gene10501-v1.0-hybrid I 0.856
Gorai.003G182100 Gossypium raimondii Gorai.003G182100 I 0.856
MDP0000029168 Malus domestica MDP0000029168 I 0.856
MDP0000136498 Malus domestica MDP0000136498 I 0.856
SapurV1A.0151s0080 Salix purpurea SapurV1A.0151s0080 I 0.856
Thhalv10000808m.g Eutrema salsugineum Thhalv10000808m.g I 0.856
Thhalv10007075m.g Eutrema salsugineum Thhalv10007075m.g I 0.856
Thhalv10024688m.g Eutrema salsugineum Thhalv10024688m.g I 0.856
PK18474.1 Cannabis sativa PK18474.1 D 0.856
chr2.CM0177.830.nc Lotus japonicus chr2.CM0177.830.nc I 0.856
Bra024993 Brassica rapa Bra024993 I 0.855
GLYMA07G05740 Glycine max GLYMA07G05740 I 0.855
GLYMA16G02320 Glycine max GLYMA16G02320 I 0.855
GSMUA_Achr1G18910_001 Musa acuminata GSMUA_Achr1G18910_001 I 0.855
PGSC0003DMG400018332 Solanum tuberosum PGSC0003DMG400018332 I 0.855
POPTR_0002s17750 Populus trichocarpa POPTR_0002s17750 I 0.855
PRUPE_ppa004680mg Prunus persica PRUPE_ppa004680mg I 0.855
Solyc01g096370.2 Solanum lycopersicum Solyc01g096370.2 I 0.855
TCM_005064 Theobroma cacao TCM_005064 I 0.855
VIT_02s0025g02610 Vitis vinifera VIT_02s0025g02610 I 0.855
VIT_15s0048g02820 Vitis vinifera VIT_15s0048g02820 I 0.855
Cla006801 Citrullus lanatus Cla006801 I 0.855
Cla006802 Citrullus lanatus Cla006802 I 0.855
27964.m000352 Ricinus communis 27964.m000352 I 0.855
27964.m000356 Ricinus communis 27964.m000356 I 0.855
cassava29800.valid.m1 Manihot esculenta cassava29800.valid.m1 I 0.855
cassava32651.m1 Manihot esculenta cassava32651.m1 I 0.855
Cucsa.120830 Cucumis sativus Cucsa.120830 I 0.855
mgf001993m Mimulus guttatus mgf001993m I 0.855
Aquca_037_00261 Aquilegia coerulea Aquca_037_00261 I 0.855
Bostr.7365s0026 Boechera stricta Bostr.7365s0026 I 0.855
Cagra.4923s0009 Capsella grandiflora Cagra.4923s0009 I 0.855
Carubv10001082m.g Capsella rubella Carubv10001082m.g I 0.855
Ciclev10019749m.g Citrus clementina Ciclev10019749m.g I 0.855
Eucgr.E00019 Eucalyptus grandis Eucgr.E00019 I 0.855
evm.TU.supercontig_141.19 Carica papaya evm.TU.supercontig_141.19 I 0.855
gene18651-v1.0-hybrid Fragaria vesca gene18651-v1.0-hybrid I 0.855
Gorai.001G151700 Gossypium raimondii Gorai.001G151700 I 0.855
Gorai.004G149500 Gossypium raimondii Gorai.004G149500 I 0.855
Gorai.007G111800 Gossypium raimondii Gorai.007G111800 I 0.855
Gorai.008G128800 Gossypium raimondii Gorai.008G128800 I 0.855
MDP0000160600 Malus domestica MDP0000160600 I 0.855
MDP0000224302 Malus domestica MDP0000224302 I 0.855
MDP0000242554 Malus domestica MDP0000242554 I 0.855
MDP0000603546 Malus domestica MDP0000603546 I 0.855
MDP0000729514 Malus domestica MDP0000729514 I 0.855
MDP0000859492 Malus domestica MDP0000859492 I 0.855
MDP0000900024 Malus domestica MDP0000900024 I 0.855
orange1.1g046178m.g Citrus sinensis orange1.1g046178m.g I 0.855
SapurV1A.0003s0670 Salix purpurea SapurV1A.0003s0670 I 0.855
PK23618.1 Cannabis sativa PK23618.1 I 0.855
Ca_17603 Cicer arietinum Ca_17603 I 0.854
Bra017520 Brassica rapa Bra017520 I 0.853
MTR_8g067280 Medicago truncatula MTR_8g067280 I 0.853
Gorai.004G184800 Gossypium raimondii Gorai.004G184800 I 0.853
MTR_4g097950 Medicago truncatula MTR_4g097950 I 0.850
Ca_09378 Cicer arietinum Ca_09378 I 0.850
Ca_09379 Cicer arietinum Ca_09379 I 0.847
BHLH13 Arabidopsis thaliana AT1G01260 D 0.843
Bo5g002590 Brassica oleracea Bo5g002590 I 0.843
Bra033273 Brassica rapa Bra033273 I 0.843
fgenesh2_kg.1__101__AT1G01260.1 Arabidopsis lyrata fgenesh2_kg.1__101__AT1G01260.1 I 0.843
GSMUA_Achr11G17840_001 Musa acuminata GSMUA_Achr11G17840_001 I 0.843
GSMUA_Achr2G18140_001 Musa acuminata GSMUA_Achr2G18140_001 I 0.843
GSMUA_Achr7G04720_001 Musa acuminata GSMUA_Achr7G04720_001 I 0.843
GSMUA_Achr8G14720_001 Musa acuminata GSMUA_Achr8G14720_001 I 0.843
GSMUA_AchrUn_randomG02900_001 Musa acuminata GSMUA_AchrUn_randomG02900_001 I 0.843
Bostr.5325s0049 Boechera stricta Bostr.5325s0049 I 0.843
Cagra.1968s0070 Capsella grandiflora Cagra.1968s0070 I 0.843
Carubv10008640m.g Capsella rubella Carubv10008640m.g I 0.843
Thhalv10000853m.g Eutrema salsugineum Thhalv10000853m.g I 0.843
Thhalv10007139m.g Eutrema salsugineum Thhalv10007139m.g I 0.843
Bo7g075820 Brassica oleracea Bo7g075820 I 0.840
Bra024992 Brassica rapa Bra024992 I 0.840