CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0003s07200
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0003s07200
T043780_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0003s07200.1
bHLH
31
81
KRIHKSEREKLKREQLNELFLELASALELSQPNNGKASMLCETTRLLKDLH
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava17541.valid.m1
Manihot esculenta
cassava17541.valid.m1
N
0.890
PK09009.1
Cannabis sativa
PK09009.1
N
0.888
cassava31792.valid.m1
Manihot esculenta
cassava31792.valid.m1
N
0.859
PRUPE_ppa010295mg
Prunus persica
PRUPE_ppa010295mg
N
0.854
Pm024772
Prunus mume
Pm024772
N
0.854
evm.TU.contig_30141.2
Carica papaya
evm.TU.contig_30141.2
N
0.844