CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0003s09200
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0003s09200
T043782_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0003s09200.1
bHLH
99
150
QRMTHIAVERNRRKLMNEHLAVLRSLMPESYVRRGDQASIVGGAIEFVKEME
POPTR_0003s09200.2
bHLH
99
150
QRMTHIAVERNRRKLMNEHLAVLRSLMPESYVRRGDQASIVGGAIEFVKEME
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_005_00478
Aquilegia coerulea
Aquca_005_00478
N
0.844
evm.TU.supercontig_48.15
Carica papaya
evm.TU.supercontig_48.15
N
0.844
Ca_01181
Cicer arietinum
Ca_01181
N
0.844
Ca_12363
Cicer arietinum
Ca_12363
N
0.847
Cla020173
Citrullus lanatus
Cla020173
N
0.844
Cucsa.091670
Cucumis sativus
Cucsa.091670
N
0.844
Eucgr.E00273
Eucalyptus grandis
Eucgr.E00273
N
0.847
Eucgr.H04468
Eucalyptus grandis
Eucgr.H04468
N
0.844
gene02199-v1.0-hybrid
Fragaria vesca
gene02199-v1.0-hybrid
N
0.847
GLYMA03G39990
Glycine max
GLYMA03G39990
N
0.844
GLYMA19G42520
Glycine max
GLYMA19G42520
N
0.844
GLYMA08G36590
Glycine max
GLYMA08G36590
N
0.847
GLYMA06G35330
Glycine max
GLYMA06G35330
N
0.847
Gorai.008G225800
Gossypium raimondii
Gorai.008G225800
N
0.847
Gorai.006G217200
Gossypium raimondii
Gorai.006G217200
N
0.847
LPERR08G15350
Leersia perrieri
LPERR08G15350
N
0.846
Lus10001271.g
Linum usitatissimum
Lus10001271.g
N
0.852
Lus10009475.g
Linum usitatissimum
Lus10009475.g
N
0.852
chr1.CM0544.580.nd
Lotus japonicus
chr1.CM0544.580.nd
N
0.843
chr5.CM0211.190.nc
Lotus japonicus
chr5.CM0211.190.nc
N
0.844
chr6.CM0738.340.nd
Lotus japonicus
chr6.CM0738.340.nd
N
0.844
MDP0000267178
Malus domestica
MDP0000267178
N
0.844
cassava19507.valid.m1
Manihot esculenta
cassava19507.valid.m1
N
0.844
cassava13431.valid.m1
Manihot esculenta
cassava13431.valid.m1
N
0.844
MTR_7g113830
Medicago truncatula
MTR_7g113830
N
0.844
MTR_8g066770
Medicago truncatula
MTR_8g066770
N
0.847
mgf015694m
Mimulus guttatus
mgf015694m
N
0.847
GSMUA_Achr3G06660_001
Musa acuminata
GSMUA_Achr3G06660_001
N
0.849
OBART08G18480
Oryza barthii
OBART08G18480
N
0.846
OB08G25610
Oryza brachyantha
OB08G25610
N
0.846
ORGLA08G0160400
Oryza glaberrima
ORGLA08G0160400
N
0.846
OGLUM08G19420
Oryza glumaepatula
OGLUM08G19420
N
0.846
BGIOSGA026779
Oryza indica
BGIOSGA026779
N
0.846
OMERI08G14480
Oryza meridionalis
OMERI08G14480
N
0.846
ONIVA08G20580
Oryza nivara
ONIVA08G20580
N
0.846
OPUNC08G16410
Oryza punctata
OPUNC08G16410
N
0.846
ORUFI08G20670
Oryza rufipogon
ORUFI08G20670
N
0.846
OS08G0483900
Oryza sativa
OS08G0483900
N
0.846
Pavir.Fb01787
Panicum virgatum
Pavir.Fb01787
N
0.846
POPTR_0005s04160
Populus trichocarpa
POPTR_0005s04160
N
0.844
POPTR_0013s02680
Populus trichocarpa
POPTR_0013s02680
N
0.844
POPTR_0001s02350
Populus trichocarpa
POPTR_0001s02350
N
0.859
30054.m000819
Ricinus communis
30054.m000819
N
0.847
30128.m008737
Ricinus communis
30128.m008737
N
0.844
SapurV1A.0092s0130
Salix purpurea
SapurV1A.0092s0130
N
0.844
SapurV1A.0151s0200
Salix purpurea
SapurV1A.0151s0200
N
0.882
SapurV1A.1055s0160
Salix purpurea
SapurV1A.1055s0160
N
0.844
SapurV1A.1124s0170
Salix purpurea
SapurV1A.1124s0170
N
0.844
Solyc08g076820.2
Solanum lycopersicum
Solyc08g076820.2
N
0.847
PGSC0003DMG400028578
Solanum tuberosum
PGSC0003DMG400028578
N
0.844
PGSC0003DMG400017540
Solanum tuberosum
PGSC0003DMG400017540
N
0.847
TCM_026599
Theobroma cacao
TCM_026599
N
0.844
TCM_015694
Theobroma cacao
TCM_015694
N
0.847
VIT_14s0128g00110
Vitis vinifera
VIT_14s0128g00110
N
0.844