CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0006s07440
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0006s07440
T043825_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0006s07440.1
bHLH
50
98
ASKNIVSERNRRKRLNERLFALRAVVPNISKMDKASIIKDAIDYIQELH
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0001s2810
Salix purpurea
SapurV1A.0001s2810
N
0.890
BGIOSGA015389
Oryza indica
BGIOSGA015389
N
0.881
ONIVA01G07150
Oryza nivara
ONIVA01G07150
N
0.881
GLYMA09G06770
Glycine max
GLYMA09G06770
I
0.879
GLYMA15G18070
Glycine max
GLYMA15G18070
I
0.879
MTR_2g038040
Medicago truncatula
MTR_2g038040
I
0.879
PGSC0003DMG400004087
Solanum tuberosum
PGSC0003DMG400004087
I
0.879
POPTR_0018s13860
Populus trichocarpa
POPTR_0018s13860
I
0.879
Solyc07g018010.2
Solanum lycopersicum
Solyc07g018010.2
I
0.879
TCM_039471
Theobroma cacao
TCM_039471
I
0.879
VIT_11s0052g00100
Vitis vinifera
VIT_11s0052g00100
I
0.879
30198.m000869
Ricinus communis
30198.m000869
I
0.879
cassava2997.m1
Manihot esculenta
cassava2997.m1
I
0.879
Aquca_018_00039
Aquilegia coerulea
Aquca_018_00039
I
0.879
Ciclev10009285m.g
Citrus clementina
Ciclev10009285m.g
I
0.879
Eucgr.C02208
Eucalyptus grandis
Eucgr.C02208
I
0.879
gene17273-v1.0-hybrid
Fragaria vesca
gene17273-v1.0-hybrid
I
0.879
Gorai.013G242800
Gossypium raimondii
Gorai.013G242800
I
0.879
Lus10006951.g
Linum usitatissimum
Lus10006951.g
I
0.879
MDP0000133262
Malus domestica
MDP0000133262
I
0.879
MDP0000318229
Malus domestica
MDP0000318229
I
0.879
orange1.1g025665m.g
Citrus sinensis
orange1.1g025665m.g
I
0.879
SapurV1A.0140s0210
Salix purpurea
SapurV1A.0140s0210
I
0.879
LPERR04G04510
Leersia perrieri
LPERR04G04510
N
0.867
BRADI5G01900
Brachypodium distachyon
BRADI5G01900
N
0.863
F775_11333
Aegilops tauschii
F775_11333
N
0.863
MLOC_44850
Hordeum vulgare
MLOC_44850
N
0.863
Si010685m.g
Setaria italica
Si010685m.g
N
0.863
Traes_2BL_070D9E2AD
Triticum aestivum
Traes_2BL_070D9E2AD
N
0.863
Traes_2DL_8BE259F4B
Triticum aestivum
Traes_2DL_8BE259F4B
N
0.863
Pavir.Ga02257
Panicum virgatum
Pavir.Ga02257
N
0.863
Pavir.Gb02374
Panicum virgatum
Pavir.Gb02374
N
0.863
Pavir.J18808
Panicum virgatum
Pavir.J18808
N
0.863
GLYMA13G00480
Glycine max
GLYMA13G00480
I
0.859
GLYMA17G06610
Glycine max
GLYMA17G06610
I
0.859
OBART04G06800
Oryza barthii
OBART04G06800
N
0.857
OGLUM04G06590
Oryza glumaepatula
OGLUM04G06590
N
0.857
OMERI03G04040
Oryza meridionalis
OMERI03G04040
N
0.857
OPUNC04G05620
Oryza punctata
OPUNC04G05620
N
0.857
ORGLA04G0051300
Oryza glaberrima
ORGLA04G0051300
N
0.857
ORUFI04G07840
Oryza rufipogon
ORUFI04G07840
N
0.857
OS04G0300600
Oryza sativa
OS04G0300600
N
0.857
Si019518m.g
Setaria italica
Si019518m.g
I
0.855
Cla019147
Citrullus lanatus
Cla019147
N
0.855
Cucsa.282100
Cucumis sativus
Cucsa.282100
N
0.855
GSMUA_Achr10G23370_001
Musa acuminata
GSMUA_Achr10G23370_001
I
0.852
GSMUA_Achr7G16000_001
Musa acuminata
GSMUA_Achr7G16000_001
I
0.852
Traes_2AL_411B944D6
Triticum aestivum
Traes_2AL_411B944D6
N
0.852
mgf019723m
Mimulus guttatus
mgf019723m
I
0.852
gene23715-v1.0-hybrid
Fragaria vesca
gene23715-v1.0-hybrid
I
0.852
PRUPE_ppa010972mg
Prunus persica
PRUPE_ppa010972mg
I
0.849
Pm008898
Prunus mume
Pm008898
I
0.849
cassava2551.valid.m1
Manihot esculenta
cassava2551.valid.m1
I
0.846
cassava2552.valid.m1
Manihot esculenta
cassava2552.valid.m1
I
0.846
PRUPE_ppa022211mg
Prunus persica
PRUPE_ppa022211mg
I
0.842
Pm020879
Prunus mume
Pm020879
I
0.842
30131.m006993
Ricinus communis
30131.m006993
I
0.840
cassava7475.valid.m1
Manihot esculenta
cassava7475.valid.m1
I
0.840
Ca_14482
Cicer arietinum
Ca_14482
N
0.839