CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0018s13830
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0018s13830
T043921_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AMS
M09782_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AMS_01
0.881
0.571
SCRM
M09784_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ICE1_01
0.874
0.592
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0018s13830.1
bHLH
51
99
ASKNTVSERNRRKKLNDKLLELRQAVPKISKLDKASTIKDAIDYIQDLQ
POPTR_0018s13830.2
bHLH
51
99
ASKNTVSERNRRKKLNDKLLELRQAVPKISKLDKASTIKDAIDYIQDLQ
POPTR_0018s13830.3
bHLH
51
99
ASKNTVSERNRRKKLNDKLLELRQAVPKISKLDKASTIKDAIDYIQDLQ
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
247 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU08999
Neurospora crassa
NCU08999
D
S40285_07187
Stachybotrys chlorohalonata
S40285_07187
I
THITE_2118624
Thielavia terrestris
THITE_2118624
I
SS1G_07451
Sclerotinia sclerotiorum
SS1G_07451
I
SPBR_07598
Sporothrix brasiliensis
SPBR_07598
I
SPAC3F10.12c
Schizosaccharomyces pombe
SPAC3F10.12c
I
SNOG_01210
Phaeosphaeria nodorum
SNOG_01210
I
SMAC_01954
Sordaria macrospora
SMAC_01954
I
SJAG_01343
Schizosaccharomyces japonicus
SJAG_01343
I
SETTUDRAFT_151606
Setosphaeria turcica
SETTUDRAFT_151606
I
SEPMUDRAFT_147069
Sphaerulina musiva
SEPMUDRAFT_147069
I
SBOR_8830
Sclerotinia borealis
SBOR_8830
I
SAPIO_CDS2951
Scedosporium apiospermum
SAPIO_CDS2951
I
S40288_02808
Stachybotrys chartarum
S40288_02808
I
TRIATDRAFT_168377
Trichoderma atroviride
TRIATDRAFT_168377
I
PV09_08442
Verruconis gallopava
PV09_08442
I
PTT_12639
Pyrenophora teres
PTT_12639
I
PTRG_03601
Pyrenophora triticirepentis
PTRG_03601
I
PNEG_03019
Pneumocystis murina
PNEG_03019
I
PFICI_11846
Pestalotiopsis fici
PFICI_11846
I
OCS_05174
Ophiocordyceps sinensis
OCS_05174
I
NEUTE1DRAFT_122509
Neurospora tetrasperma
NEUTE1DRAFT_122509
I
NechaG62784
Fusarium solani
NechaG62784
I
MYCTH_2304897
Myceliophthora thermophila
MYCTH_2304897
I
Mycgr3G37366
Zymoseptoria tritici
Mycgr3G37366
I
MYCFIDRAFT_52514
Pseudocercospora fijiensis
MYCFIDRAFT_52514
I
e_gw1.2.2378.1
Mycosphaerella graminicola
e_gw1.2.2378.1
I
e_gw1.1.1180.1
Cryphonectria parasitica
e_gw1.1.1180.1
I
AB06119.1
Alternaria brassicicola
AB06119.1
I
PredSwiss_EST995.1
Pneumocystis carinii
PredSwiss_EST995.1
I
PredSwiss_CON300.1
Pneumocystis carinii
PredSwiss_CON300.1
I
PredSwiss_CON2885.6
Pneumocystis carinii
PredSwiss_CON2885.6
I
gw1.28.77.1
Phycomyces blakesleeanus
gw1.28.77.1
I
fgeneshMC_pg.4_#_860
Mucor circinelloides
fgeneshMC_pg.4_#_860
I
estExt_Genewise1Plus.C_50250
Neurospora discreta
estExt_Genewise1Plus.C_50250
I
estExt_Genewise1Plus.C_120043
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_120043
I
estExt_Genewise1.C_sca_10_chr8_2_00368
Nectria haematococca
estExt_Genewise1.C_sca_10_chr8_2_00368
I
estExt_Genewise1.C_140532
Mycosphaerella fijiensis
estExt_Genewise1.C_140532
I
MVLG_06749
Microbotryum violaceum
MVLG_06749
I
X797_003151
Metarhizium robertsii
X797_003151
I
W97_00947
Coniosporium apollinis
W97_00947
I
VHEMI07709
Torrubiella hemipterigena
VHEMI07709
I
VDAG_06389
Verticillium dahliae
VDAG_06389
I
V499_06662
Pseudogymnoascus pannorum
V499_06662
I
UREG_04206
Uncinocarpus reesii
UREG_04206
I
UCRPA7_6332
Togninia minima
UCRPA7_6332
I
UCRNP2_3732
Neofusicoccum parvum
UCRNP2_3732
I
UCREL1_2198
Eutypa lata
UCREL1_2198
I
TRIVIDRAFT_214285
Trichoderma virens
TRIVIDRAFT_214285
I
TRIREDRAFT_4933
Trichoderma reesei
TRIREDRAFT_4933
I
CGGC5_6771
Colletotrichum gloeosporioides
CGGC5_6771
I
DOTSEDRAFT_69861
Dothistroma septosporum
DOTSEDRAFT_69861
I
CTHT_0025780
Chaetomium thermophilum
CTHT_0025780
I
CSUB01_04032
Colletotrichum sublineola
CSUB01_04032
I
CPUR_00473
Claviceps purpurea
CPUR_00473
I
CPC735_027260
Coccidioides posadasii
CPC735_027260
I
COCVIDRAFT_42159
Bipolaris victoriae
COCVIDRAFT_42159
I
COCSADRAFT_259169
Bipolaris sorokiniana
COCSADRAFT_259169
I
COCMIDRAFT_101286
Bipolaris oryzae
COCMIDRAFT_101286
I
COCCADRAFT_37451
Bipolaris zeicola
COCCADRAFT_37451
I
COCC4DRAFT_192318
Bipolaris maydis
COCC4DRAFT_192318
I
Cob_12590
Colletotrichum orbiculare
Cob_12590
I
CH063_09067
Colletotrichum higginsianum
CH063_09067
I
DRE_03021
Drechslerella stenobrocha
DRE_03021
I
CFIO01_03313
Colletotrichum fioriniae
CFIO01_03313
I
CCM_07366
Cordyceps militaris
CCM_07366
I
BGHDH14_bgh01789
Blumeria graminis
BGHDH14_bgh01789
I
Bcin10g00640
Botrytis cinerea
Bcin10g00640
I
BBA_08148
Beauveria bassiana
BBA_08148
I
BAUCODRAFT_69437
Baudoinia compniacensis
BAUCODRAFT_69437
I
BATDEDRAFT_6202
Batrachochytrium dendrobatidis
BATDEDRAFT_6202
I
AUEXF2481DRAFT_26404
Aureobasidium subglaciale
AUEXF2481DRAFT_26404
I
AOL_s00079g300
Arthrobotrys oligospora
AOL_s00079g300
I
ACRE_042390
Acremonium chrysogenum
ACRE_042390
I
SNOG_01210
Stagonospora nodorum
SNOG_01210
I
HMPREF1624_00327
Sporothrix schenckii
HMPREF1624_00327
I
MPH_03102
Macrophomina phaseolina
MPH_03102
I
MGU_04004
Metarhizium guizhouense
MGU_04004
I
MGG_01663
Magnaporthe oryzae
MGG_01663
I
MELLADRAFT_78668
Melampsora laricipopulina
MELLADRAFT_78668
I
MAPG_06431
Magnaporthe poae
MAPG_06431
I
MANI_005907
Metarhizium anisopliae
MANI_005907
I
MAM_01444
Metarhizium album
MAM_01444
I
MAJ_03240
Metarhizium majus
MAJ_03240
I
M7I_1350
Glarea lozoyensis
M7I_1350
I
M438DRAFT_239683
Aureobasidium pullulans
M438DRAFT_239683
I
M437DRAFT_43181
Aureobasidium melanogenum
M437DRAFT_43181
I
CIMG_06177
Coccidioides immitis
CIMG_06177
I
H072_3430
Dactylellina haptotyla
H072_3430
I
GSTUM_00000814001
Tuber melanosporum
GSTUM_00000814001
I
GMDG_00949
Pseudogymnoascus destructans
GMDG_00949
I
GLRG_03619
Colletotrichum graminicola
GLRG_03619
I
GGTG_01911
Gaeumannomyces graminis
GGTG_01911
I
FVEG_06927
Fusarium verticillioides
FVEG_06927
I
FPSE_06158
Fusarium pseudograminearum
FPSE_06158
I
FOXG_09323
Fusarium oxysporum
FOXG_09323
I
FGRRES_05567
Fusarium graminearum
FGRRES_05567
I
FFUJ_08700
Fusarium fujikuroi
FFUJ_08700
I
F503_05417
Ophiostoma piceae uamh
F503_05417
I