Ppa-hlh-1 (Pristionchus pacificus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PPA08246 T043944_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hlh-1
M00746_2.00 		Caenorhabditis elegans
RACAGCTGNN
NNCAGCTGTY		 PBM
DeMasi et al.(2011)
HLH-1 		0.863 0.885
hlh-1
M00929_2.00 		Caenorhabditis elegans
GACAGCTG
CAGCTGTC		 PBM
Grove et al.(2009)
HLH1 		0.863 0.885
hlh-1
M08063_2.00 		Caenorhabditis elegans
VAACAGYTGNY
RNCARCTGTTB		 ChIP-seq
Mathelier et al.(2014)
MA0545.1 		0.863 0.885
hlh-1
M09481_2.00 		Caenorhabditis elegans
NNRNCARNTGNY
RNCANYTGNYNN		 Misc
Heinz et al.(2010)
cElegans-Embryo-HLH1_modEncode 		0.863 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA08246 bHLH 166 217

Links

Other bHLH family TFs
Other Pristionchus pacificus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold6-EXSNAP2012.144 Pristionchus exspectatus scaffold6-EXSNAP2012.144 I 0.914
WUBG_05117 Wuchereria bancrofti WUBG_05117 I 0.863
Bm1750 Brugia malayi Bm1750 I 0.863
CBG13470 Caenorhabditis briggsae CBG13470 I 0.863
CBN11281 Caenorhabditis brenneri CBN11281 I 0.863
CJA13327 Caenorhabditis japonica CJA13327 I 0.863
CRE17301 Caenorhabditis remanei CRE17301 I 0.863
LOAG_16988 Loa loa LOAG_16988 I 0.863
hlh-1 Caenorhabditis elegans WBGene00001948 D 0.863
WBGene00247572 Onchocerca volvulus WBGene00247572 I 0.863
ACOC_0000253201 Angiostrongylus costaricensis ACOC_0000253201 I 0.863
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I 0.863
ANCCEY_00328 Ancylostoma ceylanicum ANCCEY_00328 I 0.863
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I 0.863
ASU_01867 Ascaris suum ASU_01867 I 0.863
BXY_0489100 Bursaphelenchus xylophilus BXY_0489100 I 0.863
DICVIV_08170 Dictyocaulus viviparus DICVIV_08170 I 0.863
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I 0.863
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I 0.863
HCOI02168200 Haemonchus contortus HCOI02168200 I 0.863
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I 0.863
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I 0.863
NECAME_14163 Necator americanus NECAME_14163 I 0.863
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I 0.863
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I 0.863
OFLC_0000064301 Onchocerca flexuosa OFLC_0000064301 I 0.863
SMUV_0000995901 Syphacia muris SMUV_0000995901 I 0.863
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I 0.863
TELCIR_07640 Teladorsagia circumcincta TELCIR_07640 I 0.863
TELCIR_14945 Teladorsagia circumcincta TELCIR_14945 I 0.863