Afo_R005555 (Aptenodytes forsteri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Afo_R005555 T046576_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hey2
M01722_2.00
Mus musculus
RCACGTGNN

NNCACGTGY
PBM
Weirauch et al.(2014)
pTH5102
0.914 1.000
HEY2
M02790_2.00
Homo sapiens
GRCACGTGNV

BNCACGTGYC
SELEX
Jolma et al.(2013)
HEY2_1
0.914 1.000
HEY2
M02791_2.00
Homo sapiens
GVCACGTGYN

NRCACGTGBC
SELEX
Jolma et al.(2013)
HEY2_2
0.914 1.000
HEY2
M04131_2.00
Homo sapiens
NVCRCGYGVN

NBCRCGYGBN
SELEX
Yin et al.(2017)
HEY2_eDBD_HT-SELEX
0.914 1.000
HEY2
M04133_2.00
Homo sapiens
NVCACGTGVN

NBCACGTGBN
SELEX
Yin et al.(2017)
HEY2_FL_HT-SELEX
0.914 1.000
HEY2
M04132_2.00
Homo sapiens
NVCRCGYRVN

NBYRCGYGBN
SELEX
Yin et al.(2017)
HEY2_eDBD_Methyl-HT-SELEX
0.914 1.000
HEY2
M04134_2.00
Homo sapiens
NVCRCGYGSN

NSCRCGYGBN
SELEX
Yin et al.(2017)
HEY2_FL_Methyl-HT-SELEX
0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R005555 bHLH 49 104

Links

Other bHLH family TFs
Other Aptenodytes forsteri TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00076p00157170 Amborella trichopoda AMTR_s00076p00157170 I
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I
Aquca_001_00247 Aquilegia coerulea Aquca_001_00247 I
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N
Aquca_062_00019 Aquilegia coerulea Aquca_062_00019 I
Aquca_068_00041 Aquilegia coerulea Aquca_068_00041 I
ATMYB35 Populus trichocarpa POPTR_0017s11140 N
ATMYB35 Vitis vinifera VIT_14s0066g02180 N
ATMYB68 Arabidopsis thaliana AT5G65790 I
ATMYB68 Arabidopsis lyrata fgenesh2_kg.8__2632__AT5G65790.1 I
BGIOSGA009166 Oryza indica BGIOSGA009166 I
BGIOSGA009746 Oryza indica BGIOSGA009746 I
BGIOSGA010923 Oryza indica BGIOSGA010923 I
Bo2g030240 Brassica oleracea Bo2g030240 I
Bo2g168190 Brassica oleracea Bo2g168190 I
Bo3g019230 Brassica oleracea Bo3g019230 I
Bo3g097710 Brassica oleracea Bo3g097710 I
Bo8g078940 Brassica oleracea Bo8g078940 I
Bo9g018910 Brassica oleracea Bo9g018910 I
Bo9g133340 Brassica oleracea Bo9g133340 I
Bostr.0568s0206 Boechera stricta Bostr.0568s0206 I
Bostr.26833s0495 Boechera stricta Bostr.26833s0495 I
Bra006811 Brassica rapa Bra006811 I
Bra017963 Brassica rapa Bra017963 I
Bra020428 Brassica rapa Bra020428 I
Bra024419 Brassica rapa Bra024419 I
Bra031847 Brassica rapa Bra031847 I
BRADI4G38965 Brachypodium distachyon BRADI4G38965 I
Cagra.0917s0007 Capsella grandiflora Cagra.0917s0007 I
Cagra.1838s0012 Capsella grandiflora Cagra.1838s0012 I
Cagra.2848s0043 Capsella grandiflora Cagra.2848s0043 I
Carubv10018748m.g Capsella rubella Carubv10018748m.g I
Carubv10026749m.g Capsella rubella Carubv10026749m.g I
Carubv10027655m.g Capsella rubella Carubv10027655m.g I
cassava11642.m1 Manihot esculenta cassava11642.m1 I
cassava16944.m1 Manihot esculenta cassava16944.m1 I
cassava22399.valid.m1 Manihot esculenta cassava22399.valid.m1 I
cassava25562.m1 Manihot esculenta cassava25562.m1 I
cassava26004.m1 Manihot esculenta cassava26004.m1 I
cassava26191.m1 Manihot esculenta cassava26191.m1 N
cassava26711.m1 Manihot esculenta cassava26711.m1 I
cassava27131.m1 Manihot esculenta cassava27131.m1 I
cassava27944.m1 Manihot esculenta cassava27944.m1 N
cassava28503.m1 Manihot esculenta cassava28503.m1 I
cassava34548.m1 Manihot esculenta cassava34548.m1 I
cassava41279.m1 Manihot esculenta cassava41279.m1 N
cassava46793.m1 Manihot esculenta cassava46793.m1 I
Ca_02249 Cicer arietinum Ca_02249 I
Ca_09203 Cicer arietinum Ca_09203 I
Ca_10555 Cicer arietinum Ca_10555 N
Ciclev10010364m.g Citrus clementina Ciclev10010364m.g I
Ciclev10010621m.g Citrus clementina Ciclev10010621m.g I
Ciclev10012151m.g Citrus clementina Ciclev10012151m.g I
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I
Ciclev10028804m.g Citrus clementina Ciclev10028804m.g I
Cla008857 Citrullus lanatus Cla008857 I
Cla014272 Citrullus lanatus Cla014272 I
Cla018072 Citrullus lanatus Cla018072 I
Cla019436 Citrullus lanatus Cla019436 N
Cla021213 Citrullus lanatus Cla021213 I
Cla023198 Citrullus lanatus Cla023198 I
Cucsa.103470 Cucumis sativus Cucsa.103470 I
Cucsa.197410 Cucumis sativus Cucsa.197410 N
Cucsa.306690 Cucumis sativus Cucsa.306690 I
Cucsa.339230 Cucumis sativus Cucsa.339230 N
Cucsa.353120 Cucumis sativus Cucsa.353120 I
Cucsa.385830 Cucumis sativus Cucsa.385830 I
Cucsa.395340 Cucumis sativus Cucsa.395340 I
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I
Eucgr.F02207 Eucalyptus grandis Eucgr.F02207 I
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I
evm.TU.supercontig_102.29 Carica papaya evm.TU.supercontig_102.29 I
evm.TU.supercontig_65.37 Carica papaya evm.TU.supercontig_65.37 I
evm.TU.supercontig_95.69 Carica papaya evm.TU.supercontig_95.69 I
e_gw1.204.95.1 Physcomitrella patens e_gw1.204.95.1 N
e_gw1.284.46.1 Physcomitrella patens e_gw1.284.46.1 N
e_gw1.46.242.1 Physcomitrella patens e_gw1.46.242.1 N
F775_02630 Aegilops tauschii F775_02630 I
F775_07686 Aegilops tauschii F775_07686 I
F775_14388 Aegilops tauschii F775_14388 I
F775_22184 Aegilops tauschii F775_22184 I
gene02643-v1.0-hybrid Fragaria vesca gene02643-v1.0-hybrid I
gene05581-v1.0-hybrid Fragaria vesca gene05581-v1.0-hybrid I
gene09663-v1.0-hybrid Fragaria vesca gene09663-v1.0-hybrid I
gene28902-v1.0-hybrid Fragaria vesca gene28902-v1.0-hybrid I
GLYMA0041S00310 Glycine max GLYMA0041S00310 I
GLYMA01G40411 Glycine max GLYMA01G40411 I
GLYMA04G05170 Glycine max GLYMA04G05170 I
GLYMA06G05260 Glycine max GLYMA06G05260 I
GLYMA10G06190 Glycine max GLYMA10G06190 I
GLYMA11G04880 Glycine max GLYMA11G04880 I
GLYMA13G04920 Glycine max GLYMA13G04920 I
GLYMA13G20510 Glycine max GLYMA13G20510 I
GLYMA14G10340 Glycine max GLYMA14G10340 I
GLYMA14G10483 Glycine max GLYMA14G10483 I
GLYMA17G35020 Glycine max GLYMA17G35020 I
GLYMA19G02090 Glycine max GLYMA19G02090 I
GLYMA19G36830 Glycine max GLYMA19G36830 I
Gorai.004G231100 Gossypium raimondii Gorai.004G231100 I
Gorai.006G162800 Gossypium raimondii Gorai.006G162800 I
Gorai.007G227500 Gossypium raimondii Gorai.007G227500 I
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I
Gorai.009G110800 Gossypium raimondii Gorai.009G110800 I
Gorai.010G028800 Gossypium raimondii Gorai.010G028800 I
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N
Gorai.013G246200 Gossypium raimondii Gorai.013G246200 I
Gorai.013G269300 Gossypium raimondii Gorai.013G269300 I
GRMZM2G015021 Zea mays GRMZM2G015021 I
GRMZM2G090837 Zea mays GRMZM2G090837 I
GRMZM2G104789 Zea mays GRMZM2G104789 I
GRMZM2G308034 Zea mays GRMZM2G308034 I
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I
GSMUA_Achr4G28090_001 Musa acuminata GSMUA_Achr4G28090_001 I
GSMUA_Achr5G01930_001 Musa acuminata GSMUA_Achr5G01930_001 I
GSMUA_Achr5G09280_001 Musa acuminata GSMUA_Achr5G09280_001 I
GSMUA_Achr5G22760_001 Musa acuminata GSMUA_Achr5G22760_001 I
GSMUA_Achr6G01850_001 Musa acuminata GSMUA_Achr6G01850_001 I
GSMUA_Achr7G19530_001 Musa acuminata GSMUA_Achr7G19530_001 I
GSMUA_Achr8G24780_001 Musa acuminata GSMUA_Achr8G24780_001 I
GSMUA_Achr9G09790_001 Musa acuminata GSMUA_Achr9G09790_001 I
LjSGA_044047.1 Lotus japonicus LjSGA_044047.1 I
LjT05A08.60.nd Lotus japonicus LjT05A08.60.nd I
LPERR02G28940 Leersia perrieri LPERR02G28940 I
LPERR03G12200 Leersia perrieri LPERR03G12200 I
LPERR03G29970 Leersia perrieri LPERR03G29970 I
Lus10001316.g Linum usitatissimum Lus10001316.g I
Lus10001394.g Linum usitatissimum Lus10001394.g I
Lus10005834.g Linum usitatissimum Lus10005834.g N
Lus10006978.g Linum usitatissimum Lus10006978.g I
Lus10007248.g Linum usitatissimum Lus10007248.g I
Lus10011606.g Linum usitatissimum Lus10011606.g I
Lus10013830.g Linum usitatissimum Lus10013830.g I
Lus10016139.g Linum usitatissimum Lus10016139.g I
Lus10021428.g Linum usitatissimum Lus10021428.g I
Lus10026543.g Linum usitatissimum Lus10026543.g I
Lus10028248.g Linum usitatissimum Lus10028248.g I
Lus10039462.g Linum usitatissimum Lus10039462.g N
MDP0000229498 Malus domestica MDP0000229498 I
MDP0000245436 Malus domestica MDP0000245436 I
MDP0000258046 Malus domestica MDP0000258046 N
MDP0000587648 Malus domestica MDP0000587648 I
mgf012871m Mimulus guttatus mgf012871m I
mgf017404m Mimulus guttatus mgf017404m I
mgf021409m Mimulus guttatus mgf021409m I
mgf021784m Mimulus guttatus mgf021784m I
mgf024894m Mimulus guttatus mgf024894m I
MLOC_44167 Hordeum vulgare MLOC_44167 I
MLOC_5098 Hordeum vulgare MLOC_5098 I
MLOC_58499 Hordeum vulgare MLOC_58499 I
MTR_1g017000 Medicago truncatula MTR_1g017000 I
MTR_1g017140 Medicago truncatula MTR_1g017140 I
MTR_2g095520 Medicago truncatula MTR_2g095520 I
MTR_3g103570 Medicago truncatula MTR_3g103570 I
MTR_4g128670 Medicago truncatula MTR_4g128670 I
MTR_5g014990 Medicago truncatula MTR_5g014990 I
MTR_6g009430 Medicago truncatula MTR_6g009430 N
MYB36 Arabidopsis thaliana AT5G57620 I
MYB36 Arabidopsis lyrata scaffold_802340.1 I
MYB36 Vitis vinifera VIT_11s0052g01490 I
O49746_ARATH Arabidopsis thaliana O49746_ARATH I
OB02G41990 Oryza brachyantha OB02G41990 I
OB03G23760 Oryza brachyantha OB03G23760 I
OB03G42660 Oryza brachyantha OB03G42660 I
OB05G32650 Oryza brachyantha OB05G32650 I
OBART02G35180 Oryza barthii OBART02G35180 I
OBART03G13840 Oryza barthii OBART03G13840 I
OBART03G35660 Oryza barthii OBART03G35660 I
OGLUM02G36330 Oryza glumaepatula OGLUM02G36330 I
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I
OLONG_007639 Oryza longistaminata OLONG_007639 I
OLONG_025560 Oryza longistaminata OLONG_025560 I
OMERI03G12640 Oryza meridionalis OMERI03G12640 I
OMERI03G32880 Oryza meridionalis OMERI03G32880 I
ONIVA02G37300 Oryza nivara ONIVA02G37300 I
ONIVA03G15100 Oryza nivara ONIVA03G15100 I
ONIVA03G37150 Oryza nivara ONIVA03G37150 I
OPUNC02G32390 Oryza punctata OPUNC02G32390 I
OPUNC03G13320 Oryza punctata OPUNC03G13320 I
OPUNC12G18070 Oryza punctata OPUNC12G18070 I
orange1.1g017727m.g Citrus sinensis orange1.1g017727m.g I
orange1.1g019787m.g Citrus sinensis orange1.1g019787m.g I
orange1.1g020997m.g Citrus sinensis orange1.1g020997m.g I
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I
orange1.1g045583m.g Citrus sinensis orange1.1g045583m.g I
ORGLA02G0304700 Oryza glaberrima ORGLA02G0304700 I
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I
ORUFI02G36680 Oryza rufipogon ORUFI02G36680 I
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I
OS02G0786400 Oryza sativa OS02G0786400 I
OS03G0771100 Oryza sativa OS03G0771100 I
Pavir.Aa00264 Panicum virgatum Pavir.Aa00264 I
Pavir.Ab03119 Panicum virgatum Pavir.Ab03119 I
Pavir.Ba03178 Panicum virgatum Pavir.Ba03178 I
Pavir.Bb01783 Panicum virgatum Pavir.Bb01783 I
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I
PGSC0003DMG400002013 Solanum tuberosum PGSC0003DMG400002013 I
PGSC0003DMG400003890 Solanum tuberosum PGSC0003DMG400003890 I
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I
PK05741.1 Cannabis sativa PK05741.1 I
PK16424.1 Cannabis sativa PK16424.1 I
PK26008.1 Cannabis sativa PK26008.1 I
Pm001105 Prunus mume Pm001105 I
Pm026353 Prunus mume Pm026353 I
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I
POPTR_0004s22490 Populus trichocarpa POPTR_0004s22490 I
POPTR_0006s12530 Populus trichocarpa POPTR_0006s12530 I
POPTR_0006s25060 Populus trichocarpa POPTR_0006s25060 I
POPTR_0009s01270 Populus trichocarpa POPTR_0009s01270 I
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I
PRUPE_ppa007823mg Prunus persica PRUPE_ppa007823mg I
PRUPE_ppa008732mg Prunus persica PRUPE_ppa008732mg I
RAX3 Arabidopsis lyrata Al_scaffold_0005_1808 I
RAX3 Arabidopsis thaliana AT3G49690 D
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I
SapurV1A.0049s0100 Salix purpurea SapurV1A.0049s0100 I
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I
SapurV1A.0589s0050 Salix purpurea SapurV1A.0589s0050 I
SapurV1A.0818s0020 Salix purpurea SapurV1A.0818s0020 I
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I
SapurV1A.1188s0040 Salix purpurea SapurV1A.1188s0040 I
Sb01g006800 Sorghum bicolor Sb01g006800 I
Sb01g038250 Sorghum bicolor Sb01g038250 I
Sb02g012860 Sorghum bicolor Sb02g012860 I
Si017415m.g Setaria italica Si017415m.g I
Si030544m.g Setaria italica Si030544m.g I
Si036681m.g Setaria italica Si036681m.g I
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I
Solyc09g008250.2 Solanum lycopersicum Solyc09g008250.2 I
TCM_000861 Theobroma cacao TCM_000861 I
TCM_034634 Theobroma cacao TCM_034634 I
TCM_037245 Theobroma cacao TCM_037245 I
TCM_038898 Theobroma cacao TCM_038898 I
TCM_042012 Theobroma cacao TCM_042012 I
TCM_045715 Theobroma cacao TCM_045715 N
Thhalv10005299m.g Eutrema salsugineum Thhalv10005299m.g I
Thhalv10010576m.g Eutrema salsugineum Thhalv10010576m.g I
Thhalv10015689m.g Eutrema salsugineum Thhalv10015689m.g I
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I
Traes_5BL_C1D4586B1 Triticum aestivum Traes_5BL_C1D4586B1 I
Traes_6AL_FF1508B19 Triticum aestivum Traes_6AL_FF1508B19 I
Traes_6BL_7755E4A8A Triticum aestivum Traes_6BL_7755E4A8A I
Traes_6DL_29EF04226 Triticum aestivum Traes_6DL_29EF04226 I
Traes_7AL_5B57EF9FC Triticum aestivum Traes_7AL_5B57EF9FC I
Traes_7DL_20EC9096A Triticum aestivum Traes_7DL_20EC9096A I
TRIUR3_13802 Triticum urartu TRIUR3_13802 I
TRIUR3_21241 Triticum urartu TRIUR3_21241 I
VIT_00s1352g00010 Vitis vinifera VIT_00s1352g00010 I
VIT_06s0061g00470 Vitis vinifera VIT_06s0061g00470 I
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I