Afo_R014556 (Aptenodytes forsteri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Afo_R014556 T046607_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYOD1
M04116_2.00 		Homo sapiens
BAACASSTGNYV
BRNCASSTGTTV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1 		0.884 0.962
MYOD1
M04117_2.00 		Homo sapiens
BRVCASMTGDCG
CGHCAKSTGBYV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2 		0.884 0.962
MYOD1
M04120_2.00 		Homo sapiens
NAACASSTGNYV
BRNCASSTGTTN		 SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1 		0.884 0.962
MYOD1
M04121_2.00 		Homo sapiens
BRMCASCTGDCR
YGHCAGSTGKYV		 SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2 		0.884 0.962
Myod1
M08060_2.00 		Mus musculus
NVNRRCAGSTGBN
NVCASCTGYYNBN		 ChIP-seq
Mathelier et al.(2014)
MA0499.1 		0.884 0.962
MYOD1
M08724_2.00 		Homo sapiens
NVNNRNRRCAGCTGN
NCAGCTGYYNYNNBN		 Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A 		0.884 0.962
Myod1
M08745_2.00 		Mus musculus
NVNRRNRRCAGSTGB
VCASCTGYYNYYNBN		 Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A 		0.884 0.962
MYOD1
M09838_2.00 		Homo sapiens
HRVCACCTGHBB
VVDCAGGTGBYD		 Transfac
Matys et al.(2006)
V$MYOD_01 		0.884 0.962
MYOD1
M09839_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOD_Q6_02 		0.884 0.962
MYOD1
M09840_2.00 		Homo sapiens
NVCABCTGNY
RNCAGVTGBN		 Transfac
Matys et al.(2006)
V$MYOD_Q6 		0.884 0.962
MYOD1
M04118_2.00 		Homo sapiens
BAACANVTGTYV
BRACABNTGTTV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1 		0.884 0.962
MYOD1
M04119_2.00 		Homo sapiens
BRRCASSTGDCR
YGHCASSTGYYV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2 		0.884 0.962
MYOD1
M04122_2.00 		Homo sapiens
NAMCASSTGBYV
BRVCASSTGKTN		 SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1 		0.884 0.962
MYOD1
M04123_2.00 		Homo sapiens
BRMCASVTGNCR
YGNCABSTGKYV		 SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2 		0.884 0.962
Myf5
M09463_2.00 		Mus musculus
NRRCAGCTGY
RCAGCTGYYN		 Misc
Heinz et al.(2010)
GM-Myf5_GSE24852 		0.870 0.942
MYF5
M09821_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYF5_Q6 		0.870 0.942
MYOG
M04098_2.00 		Homo sapiens
BRACAGCTGWCR
YGWCAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1 		0.839 0.788
MYOG
M04099_2.00 		Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN		 SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2 		0.839 0.788
MYOG
M04102_2.00 		Homo sapiens
NRACARCTGWCR
YGWCAGYTGTYN		 SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1 		0.839 0.788
MYOG
M04103_2.00 		Homo sapiens
NAACARYTGTYN
NRACARYTGTTN		 SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2 		0.839 0.788
Myog
M08061_2.00 		Mus musculus
RRCAGCTGVNN
NNBCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0500.1 		0.839 0.788
MYOG
M08721_2.00 		Homo sapiens
BHVCAGCTGYYNB
VNRRCAGCTGBDV		 Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B 		0.839 0.788
Myog
M08755_2.00 		Mus musculus
BHVCAGCTGYYNB
VNRRCAGCTGBDV		 Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A 		0.839 0.788
Myog
M09469_2.00 		Mus musculus
RACAGCTG
CAGCTGTY		 Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024 		0.839 0.788
MYOG
M09829_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01 		0.839 0.788
MYOG
M09830_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOGENIN_Q6 		0.839 0.788
MYOG
M04100_2.00 		Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1 		0.839 0.788
MYOG
M04101_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2 		0.839 0.788
MYOG
M04104_2.00 		Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV		 SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1 		0.839 0.788
MYOG
M04105_2.00 		Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN		 SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2 		0.839 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R014556 bHLH 102 153

Links

Other bHLH family TFs
Other Aptenodytes forsteri TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_06580 Arthroderma benhamiae ARB_06580 N
MCYG_07568 Arthroderma otae MCYG_07568 N
BDDG_01332 Blastomyces dermatitidis BDDG_01332 N
MCYG_07568 Microsporum canis MCYG_07568 N
MGYG_05167 Microsporum gypseum MGYG_05167 N
PDE_01988 Penicillium oxalicum PDE_01988 N
TEQG_00077 Trichophyton equinum TEQG_00077 N
H101_01481 Trichophyton interdigitale H101_01481 N
H102_06696 Trichophyton rubrum H102_06696 N
H105_06733 Trichophyton soudanense H105_06733 N
TESG_03589 Trichophyton tonsurans TESG_03589 N
TRV_07296 Trichophyton verrucosum TRV_07296 N