CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla004300
(
Citrullus lanatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cla004300
T046935_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla004300
bHLH
106
157
QRMSHITVERNRRKQMNEHLTVLRSLMPCFYVKKGDQASIIGGVVEYIKELQ
Links
Other
bHLH
family TFs
Other
Citrullus lanatus
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29844.m003312
Ricinus communis
29844.m003312
N
0.840
30169.m006534
Ricinus communis
30169.m006534
N
0.902
AMTR_s00008p00198780
Amborella trichopoda
AMTR_s00008p00198780
N
0.846
AMTR_s00015p00239460
Amborella trichopoda
AMTR_s00015p00239460
N
0.902
Aquca_037_00084
Aquilegia coerulea
Aquca_037_00084
N
0.871
Aquca_135_00008
Aquilegia coerulea
Aquca_135_00008
N
0.864
BGIOSGA006748
Oryza indica
BGIOSGA006748
N
0.902
BGIOSGA023024
Oryza indica
BGIOSGA023024
N
0.898
Bo2g046020
Brassica oleracea
Bo2g046020
N
0.902
Bo3g022850
Brassica oleracea
Bo3g022850
N
0.902
Bo3g060420
Brassica oleracea
Bo3g060420
N
0.875
Bo6g114730
Brassica oleracea
Bo6g114730
N
0.857
Bo9g110960
Brassica oleracea
Bo9g110960
N
0.902
Bostr.2570s0048
Boechera stricta
Bostr.2570s0048
N
0.888
Bostr.26833s0957
Boechera stricta
Bostr.26833s0957
N
0.902
Bra001183
Brassica rapa
Bra001183
N
0.875
Bra003073
Brassica rapa
Bra003073
N
0.902
Bra022638
Brassica rapa
Bra022638
N
0.902
Bra029088
Brassica rapa
Bra029088
N
0.902
BRADI1G38650
Brachypodium distachyon
BRADI1G38650
N
0.902
BRADI3G09670
Brachypodium distachyon
BRADI3G09670
N
0.898
Cagra.0084s0068
Capsella grandiflora
Cagra.0084s0068
N
0.902
Cagra.1772s0035
Capsella grandiflora
Cagra.1772s0035
N
0.864
Carubv10012751m.g
Capsella rubella
Carubv10012751m.g
N
0.864
Carubv10026630m.g
Capsella rubella
Carubv10026630m.g
N
0.902
cassava11522.m1
Manihot esculenta
cassava11522.m1
N
0.851
cassava32469.m1
Manihot esculenta
cassava32469.m1
N
0.902
cassava3377.m1
Manihot esculenta
cassava3377.m1
N
0.840
cassava7222.valid.m1
Manihot esculenta
cassava7222.valid.m1
N
0.902
Ca_03951
Cicer arietinum
Ca_03951
N
0.902
Ca_13080
Cicer arietinum
Ca_13080
N
0.874
chr6.CM0139.250.nd
Lotus japonicus
chr6.CM0139.250.nd
N
0.840
Ciclev10005947m.g
Citrus clementina
Ciclev10005947m.g
N
0.840
Ciclev10007150m.g
Citrus clementina
Ciclev10007150m.g
N
0.898
Cla016479
Citrullus lanatus
Cla016479
N
0.847
Cucsa.012930
Cucumis sativus
Cucsa.012930
N
0.914
Cucsa.313010
Cucumis sativus
Cucsa.313010
N
0.847
estExt_gwp_gw1.C_710125
Physcomitrella patens
estExt_gwp_gw1.C_710125
N
0.849
Eucgr.A02667
Eucalyptus grandis
Eucgr.A02667
N
0.902
Eucgr.H03591
Eucalyptus grandis
Eucgr.H03591
N
0.864
evm.TU.supercontig_3.51
Carica papaya
evm.TU.supercontig_3.51
N
0.870
gene06093-v1.0-hybrid
Fragaria vesca
gene06093-v1.0-hybrid
N
0.864
GLYMA04G41710
Glycine max
GLYMA04G41710
N
0.902
GLYMA06G13081
Glycine max
GLYMA06G13081
N
0.902
GLYMA10G29760
Glycine max
GLYMA10G29760
N
0.844
GLYMA13G27880
Glycine max
GLYMA13G27880
N
0.840
GLYMA15G11130
Glycine max
GLYMA15G11130
N
0.840
Gorai.006G054300
Gossypium raimondii
Gorai.006G054300
N
0.864
Gorai.008G270700
Gossypium raimondii
Gorai.008G270700
N
0.902
GRMZM2G045109
Zea mays
GRMZM2G045109
N
0.890
GRMZM2G064638
Zea mays
GRMZM2G064638
N
0.902
GRMZM2G085751
Zea mays
GRMZM2G085751
N
0.902
GSMUA_Achr10G01060_001
Musa acuminata
GSMUA_Achr10G01060_001
N
0.902
GSMUA_Achr5G06780_001
Musa acuminata
GSMUA_Achr5G06780_001
N
0.881
GSMUA_Achr8G19870_001
Musa acuminata
GSMUA_Achr8G19870_001
N
0.902
LPERR02G09400
Leersia perrieri
LPERR02G09400
N
0.902
LPERR06G13950
Leersia perrieri
LPERR06G13950
N
0.898
Lus10001066.g
Linum usitatissimum
Lus10001066.g
N
0.851
Lus10007139.g
Linum usitatissimum
Lus10007139.g
N
0.847
Lus10014938.g
Linum usitatissimum
Lus10014938.g
N
0.871
Lus10039328.g
Linum usitatissimum
Lus10039328.g
N
0.851
MDP0000131133
Malus domestica
MDP0000131133
N
0.881
MDP0000205030
Malus domestica
MDP0000205030
N
0.864
MDP0000318772
Malus domestica
MDP0000318772
N
0.864
mgf011108m
Mimulus guttatus
mgf011108m
N
0.890
mgf014552m
Mimulus guttatus
mgf014552m
N
0.902
MLOC_54435
Hordeum vulgare
MLOC_54435
N
0.902
MTR_1g028470
Medicago truncatula
MTR_1g028470
N
0.842
MTR_2g022280
Medicago truncatula
MTR_2g022280
N
0.840
MTR_3g090850
Medicago truncatula
MTR_3g090850
N
0.902
MTR_5g064950
Medicago truncatula
MTR_5g064950
N
0.857
MUTE
Arabidopsis thaliana
AT3G06120
N
0.864
MUTE
Arabidopsis lyrata
scaffold_300691.1
N
0.864
MUTE
Vitis vinifera
VIT_05s0020g02700
N
0.840
OB02G19900
Oryza brachyantha
OB02G19900
N
0.902
OBART02G11110
Oryza barthii
OBART02G11110
N
0.902
OBART06G16920
Oryza barthii
OBART06G16920
N
0.898
OGLUM02G11060
Oryza glumaepatula
OGLUM02G11060
N
0.902
OGLUM06G17990
Oryza glumaepatula
OGLUM06G17990
N
0.898
OLONG_015104
Oryza longistaminata
OLONG_015104
N
0.898
OMERI02G11850
Oryza meridionalis
OMERI02G11850
N
0.902
OMERI06G17780
Oryza meridionalis
OMERI06G17780
N
0.898
ONIVA02G12460
Oryza nivara
ONIVA02G12460
N
0.902
ONIVA06G19730
Oryza nivara
ONIVA06G19730
N
0.898
OPUNC02G09860
Oryza punctata
OPUNC02G09860
N
0.902
OPUNC06G15310
Oryza punctata
OPUNC06G15310
N
0.898
orange1.1g042904m.g
Citrus sinensis
orange1.1g042904m.g
N
0.898
ORGLA02G0100500
Oryza glaberrima
ORGLA02G0100500
N
0.902
ORGLA06G0140300
Oryza glaberrima
ORGLA06G0140300
N
0.898
ORUFI02G11080
Oryza rufipogon
ORUFI02G11080
N
0.902
ORUFI06G17910
Oryza rufipogon
ORUFI06G17910
N
0.898
OS02G0257500
Oryza sativa
OS02G0257500
N
0.902
OS06G0526100
Oryza sativa
OS06G0526100
N
0.898
Pavir.Aa02723
Panicum virgatum
Pavir.Aa02723
N
0.902
Pavir.Ab01030
Panicum virgatum
Pavir.Ab01030
N
0.902
Pavir.Da00918
Panicum virgatum
Pavir.Da00918
N
0.902
Pavir.Db01402
Panicum virgatum
Pavir.Db01402
N
0.902
PDK_20s1314901g001
Phoenix dactylifera
PDK_20s1314901g001
N
0.902
PGSC0003DMG400009101
Solanum tuberosum
PGSC0003DMG400009101
N
0.881
PK01904.1
Cannabis sativa
PK01904.1
N
0.898
Pm008014
Prunus mume
Pm008014
N
0.864
Pm019784
Prunus mume
Pm019784
N
0.881
POPTR_0008s20720
Populus trichocarpa
POPTR_0008s20720
N
0.840
POPTR_0012s01370
Populus trichocarpa
POPTR_0012s01370
N
0.902
POPTR_0015s06160
Populus trichocarpa
POPTR_0015s06160
N
0.902
PRUPE_ppa015055mg
Prunus persica
PRUPE_ppa015055mg
N
0.881
PRUPE_ppa019299mg
Prunus persica
PRUPE_ppa019299mg
N
0.864
SapurV1A.0022s0230
Salix purpurea
SapurV1A.0022s0230
N
0.840
SapurV1A.0377s0010
Salix purpurea
SapurV1A.0377s0010
N
0.868
SapurV1A.1043s0040
Salix purpurea
SapurV1A.1043s0040
N
0.868
SapurV1A.1227s0030
Salix purpurea
SapurV1A.1227s0030
N
0.902
Sb04g009390
Sorghum bicolor
Sb04g009390
N
0.902
Sb10g020490
Sorghum bicolor
Sb10g020490
N
0.902
Si006640m.g
Setaria italica
Si006640m.g
N
0.902
Si017482m.g
Setaria italica
Si017482m.g
N
0.902
Solyc03g007410.2
Solanum lycopersicum
Solyc03g007410.2
N
0.902
SPCH
Arabidopsis lyrata
Al_scaffold_0008_1712
N
0.902
SPCH
Arabidopsis thaliana
AT5G53210
N
0.902
SPCH
Vitis vinifera
VIT_16s0050g02500
N
0.902
TCM_015345
Theobroma cacao
TCM_015345
N
0.902
TCM_020520
Theobroma cacao
TCM_020520
N
0.840
Thhalv10002990m.g
Eutrema salsugineum
Thhalv10002990m.g
N
0.849
Thhalv10013877m.g
Eutrema salsugineum
Thhalv10013877m.g
N
0.902
Thhalv10022251m.g
Eutrema salsugineum
Thhalv10022251m.g
N
0.864
Traes_7DL_1717A9083
Triticum aestivum
Traes_7DL_1717A9083
N
0.902