CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ogr06591
(
Ophisaurus gracilis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ogr06591
T047509_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Twist2
M01718_2.00
Mus musculus
NACATATGKN
NMCATATGTN
PBM
Weirauch et al.(2014)
pTH5033
0.914
1.000
TWIST1
M08052_2.00
Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN
ChIP-seq
Mathelier et al.(2014)
MA1123.1
0.914
0.962
TWIST1
M08722_2.00
Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW
Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A
0.914
0.962
Twist1
M08766_2.00
Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW
Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B
0.914
0.962
TWIST1
M09831_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6_01
0.914
0.962
TWIST1
M09832_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6
0.914
0.962
twi
M03605_2.00
Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK
SELEX
Nitta et al.(2015)
twi_1
0.859
0.827
twi
M03606_2.00
Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK
SELEX
Nitta et al.(2015)
twi_2
0.859
0.827
twi
M05955_2.00
Drosophila melanogaster
VCCAGATGTB
VACATCTGGB
B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900
0.859
0.827
twi
M05956_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900
0.859
0.827
twi
M07538_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
DNaseI footprinting
Mathelier et al.(2014)
MA0249.1
0.859
0.827
twi
M09657_2.00
Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT
Misc
Kulakovskiy et al.(2009)
twi
0.859
0.827
twi
M09892_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TWI_Q6
0.859
0.827
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr06591
bHLH
67
118
QRILANVRERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLY
Links
Other
bHLH
family TFs
Other
Ophisaurus gracilis
TFs
236 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bhlha15
Mus musculus
ENSMUSG00000052271
D
BHLHA15
Homo sapiens
ENSG00000180535
D
Afo_R012275
Aptenodytes forsteri
Afo_R012275
I
ENSPPYG00000017361
Pongo abelii
ENSPPYG00000017361
I
ENSPSIG00000001236
Pelodiscus sinensis
ENSPSIG00000001236
I
BHLHA15
Pan troglodytes
ENSPTRG00000019434
I
Bhlha15
Rattus norvegicus
ENSRNOG00000025164
I
ENSSHAG00000015620
Sarcophilus harrisii
ENSSHAG00000015620
I
ENSSSCG00000007600
Sus scrofa
ENSSSCG00000007600
I
ENSSTOG00000009728
Ictidomys tridecemlineatus
ENSSTOG00000009728
I
bhlha15
Tetraodon nigroviridis
ENSTNIG00000012887
I
bhlha15
Takifugu rubripes
ENSTRUG00000016815
I
BHLHA15
Tursiops truncatus
ENSTTRG00000015701
I
ENSXMAG00000014837
Xiphophorus maculatus
ENSXMAG00000014837
I
Aan_R003120
Calypte anna
Aan_R003120
I
bhlha15
Oryzias latipes
ENSORLG00000003401
I
Alligator_sinensis_CCG022066.1
Alligator sinensis
Alligator_sinensis_CCG022066.1
I
Brh_R005630
Buceros rhinoceros
Brh_R005630
I
Cmyd_10012423
Chelonia mydas
Cmyd_10012423
I
ENSP00000326391-D1
Bos grunniens
ENSP00000326391-D1
I
ENSP00000326391
Macaca fascicularis
ENSP00000326391
I
Gfo_R007094
Geospiza fortis
Gfo_R007094
I
Ogr03050
Ophisaurus gracilis
Ogr03050
I
Pvit_16465
Pogona vitticeps
Pvit_16465
I
Tal_R009599
Tyto alba
Tal_R009599
I
estExt_fgenesh2_pg.C_2400032
Branchiostoma floridae
estExt_fgenesh2_pg.C_2400032
I
XP_002931994
Xenopus tropicalis
XP_002931994
I
BHLHA15
Loxodonta africana
ENSLAFG00000000139
I
ENSAMXG00000025873
Astyanax mexicanus
ENSAMXG00000025873
I
ENSAPLG00000001024
Anas platyrhynchos
ENSAPLG00000001024
I
BHLHA15
Bos taurus
ENSBTAG00000046010
I
BHLHA15
Canis familiaris
ENSCAFG00000015425
I
BHLHA15
Callithrix jacchus
ENSCJAG00000023085
I
ENSCPOG00000009423
Cavia porcellus
ENSCPOG00000009423
I
ENSCSAG00000019492
Chlorocebus sabaeus
ENSCSAG00000019492
I
bhlha15
Danio rerio
ENSDARG00000045166
I
ENSECAG00000012532
Equus caballus
ENSECAG00000012532
I
bhlha15
Gasterosteus aculeatus
ENSGACG00000009403
I
ENSGMOG00000003972
Gadus morhua
ENSGMOG00000003972
I
ENSLACG00000013715
Latimeria chalumnae
ENSLACG00000013715
I
ENSPFOG00000013242
Poecilia formosa
ENSPFOG00000013242
I
BHLHA15
Meleagris gallopavo
ENSMGAG00000015527
I
BHLHA15
Myotis lucifugus
ENSMLUG00000009476
I
ENSMMUG00000015478
Macaca mulatta
ENSMMUG00000015478
I
BHLHA15
Monodelphis domestica
ENSMODG00000025044
I
ENSMPUG00000020102
Mustela putorius furo
ENSMPUG00000020102
I
ENSNLEG00000018875
Nomascus leucogenys
ENSNLEG00000018875
I
BHLHA15
Ornithorhynchus anatinus
ENSOANG00000001937
I
BHLHA15
Oryctolagus cuniculus
ENSOCUG00000025058
I
BHLHA15
Otolemur garnettii
ENSOGAG00000010106
I
ENSONIG00000021203
Oreochromis niloticus
ENSONIG00000021203
I
ENSACAG00000012378
Anolis carolinensis
ENSACAG00000012378
I